RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 CACNG8Q8WXS5 425 aa17.27■□□□□ 0.36
IRF3-220ENST00000598108 TMEM213A2RRL7 107 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 RNASE2P10153 161 aaKnown RBP17.26■□□□□ 0.35
IRF3-220ENST00000598108 ADMP35318 185 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 SNCAP37840 140 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 HOXA1P49639 335 aaPredicted RBP17.26■□□□□ 0.35
IRF3-220ENST00000598108 DEFB114Q30KQ6 69 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 CD300EQ496F6 205 aaPredicted RBP17.26■□□□□ 0.35
IRF3-220ENST00000598108 TM4SF20Q53R12 229 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 TMEM128Q5BJH2 165 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 PVRIGQ6DKI7 326 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 Q8N1Y9 231 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 UBAC2Q8NBM4 344 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 OR52E5Q8NH55 327 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 BSCL2Q96G97 398 aaPredicted RBP17.26■□□□□ 0.35
IRF3-220ENST00000598108 ZNF436Q9C0F3 470 aaPredicted RBP17.26■□□□□ 0.35
IRF3-220ENST00000598108 SELENOKQ9Y6D0 94 aa17.26■□□□□ 0.35
IRF3-220ENST00000598108 A0A0B4J2A0 478 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 A6NHS1 94 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 CBLN1P23435 193 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 INPP1P49441 399 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 CD69Q07108 199 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 Q56UQ5 140 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 NMSQ5H8A3 153 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 LGI3Q8N145 548 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 PINX1Q96BK5 328 aaKnown RBP17.25■□□□□ 0.35
IRF3-220ENST00000598108 ZNF414Q96IQ9 312 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 ATP6V0BQ99437 205 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 SHPKQ9UHJ6 478 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 SMAD5-AS1Q9Y6J3 95 aa17.25■□□□□ 0.35
IRF3-220ENST00000598108 A8MWP6 167 aa17.24■□□□□ 0.35
IRF3-220ENST00000598108 CTSGP08311 255 aa17.24■□□□□ 0.35
IRF3-220ENST00000598108 IL7P13232 177 aa17.24■□□□□ 0.35
IRF3-220ENST00000598108 ANKRD55Q3KP44 614 aa17.24■□□□□ 0.35
IRF3-220ENST00000598108 C11orf87Q6NUJ2 197 aa17.24■□□□□ 0.35
IRF3-220ENST00000598108 SPSB3Q6PJ21 355 aa17.24■□□□□ 0.35
IRF3-220ENST00000598108 ENY2Q9NPA8 101 aa17.24■□□□□ 0.35
IRF3-220ENST00000598108 NXPH3O95157 252 aa17.23■□□□□ 0.35
IRF3-220ENST00000598108 SULT1A3P0DMM9 295 aa17.23■□□□□ 0.35
IRF3-220ENST00000598108 SULT1A4P0DMN0 295 aa17.23■□□□□ 0.35
IRF3-220ENST00000598108 ANXA3P12429 323 aa17.23■□□□□ 0.35
IRF3-220ENST00000598108 MFAP4P55083 255 aa17.23■□□□□ 0.35
IRF3-220ENST00000598108 PPP1R1AQ13522 171 aa17.23■□□□□ 0.35
IRF3-220ENST00000598108 BSXQ3C1V8 233 aa17.23■□□□□ 0.35
IRF3-220ENST00000598108 LCN12Q6JVE5 192 aa17.23■□□□□ 0.35
IRF3-220ENST00000598108 UXS1Q8NBZ7 420 aa17.23■□□□□ 0.35
IRF3-220ENST00000598108 NAP1L6A6NFF2 107 aa17.22■□□□□ 0.35
IRF3-220ENST00000598108 ZNF785A8K8V0 405 aa17.22■□□□□ 0.35
IRF3-220ENST00000598108 VAMP1P23763 118 aa17.22■□□□□ 0.35
IRF3-220ENST00000598108 BTCP35070 178 aa17.22■□□□□ 0.35
IRF3-220ENST00000598108 SRPXP78539 464 aa17.22■□□□□ 0.35
IRF3-220ENST00000598108 RBMS2Q15434 407 aaKnown RBP17.22■□□□□ 0.35
IRF3-220ENST00000598108 MLANAQ16655 118 aa17.22■□□□□ 0.35
IRF3-220ENST00000598108 DYNLRB2Q8TF09 96 aa17.22■□□□□ 0.35
IRF3-220ENST00000598108 MLXQ9UH92 298 aa17.22■□□□□ 0.35
IRF3-220ENST00000598108 FLVCR2Q9UPI3 526 aa17.22■□□□□ 0.35
IRF3-220ENST00000598108 IGHV3OR16-8A0A075B7F1 116 aa17.21■□□□□ 0.35
IRF3-220ENST00000598108 NDUFB6O95139 128 aa17.21■□□□□ 0.35
IRF3-220ENST00000598108 SFT2D2O95562 160 aa17.21■□□□□ 0.35
IRF3-220ENST00000598108 C8orf88P0DMB2 117 aa17.21■□□□□ 0.35
IRF3-220ENST00000598108 FCGR2BP31994 310 aaPredicted RBP17.21■□□□□ 0.35
IRF3-220ENST00000598108 CNPY1Q3B7I2 92 aa17.21■□□□□ 0.35
IRF3-220ENST00000598108 CENPSQ8N2Z9 138 aa17.21■□□□□ 0.35
IRF3-220ENST00000598108 OR2K2Q8NGT1 345 aa17.21■□□□□ 0.35
IRF3-220ENST00000598108 TMEM190Q8WZ59 177 aa17.21■□□□□ 0.35
IRF3-220ENST00000598108 TXN2Q99757 166 aa17.21■□□□□ 0.35
IRF3-220ENST00000598108 ASCL2Q99929 193 aa17.21■□□□□ 0.35
IRF3-220ENST00000598108 TECRQ9NZ01 308 aaKnown RBP17.21■□□□□ 0.35
IRF3-220ENST00000598108 COL7A1Q02388 2944 aa17.2■□□□□ 0.34
IRF3-220ENST00000598108 CEBPZOSA8MTT3 80 aa17.2■□□□□ 0.34
IRF3-220ENST00000598108 PLA2G10O15496 165 aa17.2■□□□□ 0.34
IRF3-220ENST00000598108 SUB1P53999 127 aaKnown RBP eCLIP17.2■□□□□ 0.34
IRF3-220ENST00000598108 SMCO1Q147U7 214 aa17.2■□□□□ 0.34
IRF3-220ENST00000598108 FNDC4Q9H6D8 234 aaPredicted RBP17.2■□□□□ 0.34
IRF3-220ENST00000598108 PALMDQ9NP74 551 aa17.2■□□□□ 0.34
IRF3-220ENST00000598108 HEYLQ9NQ87 328 aaPredicted RBP17.2■□□□□ 0.34
IRF3-220ENST00000598108 MRPL36Q9P0J6 103 aaKnown RBP17.2■□□□□ 0.34
IRF3-220ENST00000598108 UFC1Q9Y3C8 167 aa17.2■□□□□ 0.34
IRF3-220ENST00000598108 NDUFA4O00483 81 aa17.19■□□□□ 0.34
IRF3-220ENST00000598108 ELLP55199 621 aaPredicted RBP17.19■□□□□ 0.34
IRF3-220ENST00000598108 LRTM2Q8N967 370 aa17.19■□□□□ 0.34
IRF3-220ENST00000598108 TMEM170AQ8WVE7 144 aa17.19■□□□□ 0.34
IRF3-220ENST00000598108 WDR89Q96FK6 387 aaPredicted RBP17.19■□□□□ 0.34
IRF3-220ENST00000598108 GAR1Q9NY12 217 aaKnown RBP17.19■□□□□ 0.34
IRF3-220ENST00000598108 A0A1B0GU03 582 aa17.18■□□□□ 0.34
IRF3-220ENST00000598108 NUPL2O15504 423 aaKnown RBP17.18■□□□□ 0.34
IRF3-220ENST00000598108 TNFRSF9Q07011 255 aa17.18■□□□□ 0.34
IRF3-220ENST00000598108 C20orf24Q9BUV8 137 aa17.18■□□□□ 0.34
IRF3-220ENST00000598108 CENPXA8MT69 81 aa17.17■□□□□ 0.34
IRF3-220ENST00000598108 ZNF207O43670 478 aaKnown RBP17.17■□□□□ 0.34
IRF3-220ENST00000598108 FRMD6-AS1P0C7T7 363 aa17.17■□□□□ 0.34
IRF3-220ENST00000598108 IGHV4-30-4P0DP06 118 aa17.17■□□□□ 0.34
IRF3-220ENST00000598108 HTR2BP41595 481 aa17.17■□□□□ 0.34
IRF3-220ENST00000598108 BTNL8Q6UX41 500 aa17.17■□□□□ 0.34
IRF3-220ENST00000598108 TMEM61Q8N0U2 210 aa17.17■□□□□ 0.34
IRF3-220ENST00000598108 DUSP18Q8NEJ0 188 aa17.17■□□□□ 0.34
IRF3-220ENST00000598108 MARC2Q969Z3 335 aa17.17■□□□□ 0.34
IRF3-220ENST00000598108 C7orf50Q9BRJ6 194 aaKnown RBP17.17■□□□□ 0.34
IRF3-220ENST00000598108 MRPL27Q9P0M9 148 aaKnown RBP17.17■□□□□ 0.34
IRF3-220ENST00000598108 HSPB7Q9UBY9 170 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms