RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 PRCDQ00LT1 54 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 KCTD21Q4G0X4 260 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 LEMD1Q68G75 181 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 TOMM20LQ6UXN7 152 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 TCF24Q7RTU0 167 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 H2BFWTQ7Z2G1 175 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 SNX29P2Q8IUI4 249 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 FAM24BQ8N5W8 94 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 TMEM217Q8N7C4 229 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 OR11H2Q8NH07 326 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 FBXL17Q9UF56 701 aa11.78□□□□□ -0.52
LIM2-202ENST00000596399 M0QYG6 137 aa11.77□□□□□ -0.53
LIM2-202ENST00000596399 GNG7O60262 68 aa11.77□□□□□ -0.53
LIM2-202ENST00000596399 TMEM127O75204 238 aa11.77□□□□□ -0.53
LIM2-202ENST00000596399 DFFBO76075 338 aa11.77□□□□□ -0.53
LIM2-202ENST00000596399 CROCCP3Q8IVE0 287 aa11.77□□□□□ -0.53
LIM2-202ENST00000596399 ZNF114Q8NC26 417 aa11.77□□□□□ -0.53
LIM2-202ENST00000596399 TXN2Q99757 166 aa11.77□□□□□ -0.53
LIM2-202ENST00000596399 C6orf62Q9GZU0 229 aaPredicted RBP11.77□□□□□ -0.53
LIM2-202ENST00000596399 COMMD3Q9UBI1 195 aa11.77□□□□□ -0.53
LIM2-202ENST00000596399 PI3P19957 117 aa11.76□□□□□ -0.53
LIM2-202ENST00000596399 HSPE1P61604 102 aaKnown RBP11.76□□□□□ -0.53
LIM2-202ENST00000596399 PRR20EP86478 221 aa11.76□□□□□ -0.53
LIM2-202ENST00000596399 PRR20CP86479 221 aa11.76□□□□□ -0.53
LIM2-202ENST00000596399 PRR20DP86480 221 aa11.76□□□□□ -0.53
LIM2-202ENST00000596399 PRR20BP86481 221 aa11.76□□□□□ -0.53
LIM2-202ENST00000596399 PRR20AP86496 221 aa11.76□□□□□ -0.53
LIM2-202ENST00000596399 C11orf45Q8TAV5 145 aa11.76□□□□□ -0.53
LIM2-202ENST00000596399 CMTM3Q96MX0 182 aa11.76□□□□□ -0.53
LIM2-202ENST00000596399 MS4A6AQ9H2W1 248 aa11.76□□□□□ -0.53
LIM2-202ENST00000596399 PCLOQ9Y6V0 5065 aa11.76□□□□□ -0.53
LIM2-202ENST00000596399 KIAA1109Q2LD37 5005 aa11.75□□□□□ -0.53
LIM2-202ENST00000596399 A0A1B0GU03 582 aa11.75□□□□□ -0.53
LIM2-202ENST00000596399 CA1P00915 261 aaPredicted RBP11.75□□□□□ -0.53
LIM2-202ENST00000596399 IGKV1-5P01602 117 aa11.75□□□□□ -0.53
LIM2-202ENST00000596399 DEFB131AP59861 70 aa11.75□□□□□ -0.53
LIM2-202ENST00000596399 RNASE12Q5GAN4 147 aaKnown RBP11.75□□□□□ -0.53
LIM2-202ENST00000596399 LGALS9CQ6DKI2 356 aa11.75□□□□□ -0.53
LIM2-202ENST00000596399 LPCAT3Q6P1A2 487 aa11.75□□□□□ -0.53
LIM2-202ENST00000596399 GATAD1Q8WUU5 269 aa11.75□□□□□ -0.53
LIM2-202ENST00000596399 ZFAND3Q9H8U3 227 aa11.75□□□□□ -0.53
LIM2-202ENST00000596399 MRPL36Q9P0J6 103 aaKnown RBP11.75□□□□□ -0.53
LIM2-202ENST00000596399 PUS1Q9Y606 427 aaKnown RBP eCLIP11.75□□□□□ -0.53
LIM2-202ENST00000596399 HECTD4Q9Y4D8 3996 aa11.74□□□□□ -0.53
LIM2-202ENST00000596399 A0A0B4J293 547 aa11.74□□□□□ -0.53
LIM2-202ENST00000596399 ST8SIA3O43173 380 aa11.74□□□□□ -0.53
LIM2-202ENST00000596399 ELK1P19419 428 aa11.74□□□□□ -0.53
LIM2-202ENST00000596399 NCS1P62166 190 aa11.74□□□□□ -0.53
LIM2-202ENST00000596399 RPL11P62913 178 aaKnown RBP11.74□□□□□ -0.53
LIM2-202ENST00000596399 VSIRQ9H7M9 311 aa11.74□□□□□ -0.53
LIM2-202ENST00000596399 FAM212BQ9NTI7 297 aaPredicted RBP11.74□□□□□ -0.53
LIM2-202ENST00000596399 DNASE2O00115 360 aaPredicted RBP11.73□□□□□ -0.53
LIM2-202ENST00000596399 HPGDSO60760 199 aa11.73□□□□□ -0.53
LIM2-202ENST00000596399 TMEM50AO95807 157 aa11.73□□□□□ -0.53
LIM2-202ENST00000596399 S100GP29377 79 aa11.73□□□□□ -0.53
LIM2-202ENST00000596399 PPP5CP53041 499 aa11.73□□□□□ -0.53
LIM2-202ENST00000596399 UCP3P55916 312 aa11.73□□□□□ -0.53
LIM2-202ENST00000596399 CMC4P56277 68 aaPredicted RBP11.73□□□□□ -0.53
LIM2-202ENST00000596399 PAFAH1B2P68402 229 aa11.73□□□□□ -0.53
LIM2-202ENST00000596399 ERHP84090 104 aaKnown RBP11.73□□□□□ -0.53
LIM2-202ENST00000596399 RBMS2Q15434 407 aaKnown RBP11.73□□□□□ -0.53
LIM2-202ENST00000596399 MLANAQ16655 118 aa11.73□□□□□ -0.53
LIM2-202ENST00000596399 TP53RKQ96S44 253 aa11.73□□□□□ -0.53
LIM2-202ENST00000596399 C11orf68Q9H3H3 251 aaKnown RBP11.73□□□□□ -0.53
LIM2-202ENST00000596399 SMIM31A0A1B0GVY4 71 aa11.72□□□□□ -0.53
LIM2-202ENST00000596399 GIG44P09565 113 aaPredicted RBP11.72□□□□□ -0.53
LIM2-202ENST00000596399 P0C879 139 aa11.72□□□□□ -0.53
LIM2-202ENST00000596399 RCVRNP35243 200 aa11.72□□□□□ -0.53
LIM2-202ENST00000596399 ETV6P41212 452 aa11.72□□□□□ -0.53
LIM2-202ENST00000596399 VBP1P61758 197 aa11.72□□□□□ -0.53
LIM2-202ENST00000596399 DUSP18Q8NEJ0 188 aa11.72□□□□□ -0.53
LIM2-202ENST00000596399 GINS3Q9BRX5 216 aa11.72□□□□□ -0.53
LIM2-202ENST00000596399 SCPEP1Q9HB40 452 aa11.72□□□□□ -0.53
LIM2-202ENST00000596399 RABAC1Q9UI14 185 aa11.72□□□□□ -0.53
LIM2-202ENST00000596399 APOA1P02647 267 aa11.71□□□□□ -0.53
LIM2-202ENST00000596399 IFNA4P05014 189 aa11.71□□□□□ -0.53
LIM2-202ENST00000596399 PGAM2P15259 253 aa11.71□□□□□ -0.53
LIM2-202ENST00000596399 SNCAP37840 140 aa11.71□□□□□ -0.53
LIM2-202ENST00000596399 NPBWR1P48145 328 aa11.71□□□□□ -0.53
LIM2-202ENST00000596399 TMEM187Q14656 261 aa11.71□□□□□ -0.53
LIM2-202ENST00000596399 SP6Q3SY56 376 aa11.71□□□□□ -0.53
LIM2-202ENST00000596399 ZNF600Q6ZNG1 722 aa11.71□□□□□ -0.53
LIM2-202ENST00000596399 SLC35G3Q8N808 338 aa11.71□□□□□ -0.53
LIM2-202ENST00000596399 FNDC4Q9H6D8 234 aaPredicted RBP11.71□□□□□ -0.53
LIM2-202ENST00000596399 KLK11Q9UBX7 282 aa11.71□□□□□ -0.53
LIM2-202ENST00000596399 A0A0G2JRQ6 117 aa11.7□□□□□ -0.54
LIM2-202ENST00000596399 KNCNA6PVL3 124 aa11.7□□□□□ -0.54
LIM2-202ENST00000596399 IFNA17P01571 189 aa11.7□□□□□ -0.54
LIM2-202ENST00000596399 RNASE2P10153 161 aaKnown RBP11.7□□□□□ -0.54
LIM2-202ENST00000596399 PIGPP57054 158 aa11.7□□□□□ -0.54
LIM2-202ENST00000596399 Q8NAQ8 132 aa11.7□□□□□ -0.54
LIM2-202ENST00000596399 FUNDC2Q9BWH2 189 aa11.7□□□□□ -0.54
LIM2-202ENST00000596399 MFFQ9GZY8 342 aa11.7□□□□□ -0.54
LIM2-202ENST00000596399 DNAH6Q9C0G6 4158 aa11.69□□□□□ -0.54
LIM2-202ENST00000596399 A0A087WXM4 84 aa11.69□□□□□ -0.54
LIM2-202ENST00000596399 IGLL5B9A064 214 aa11.69□□□□□ -0.54
LIM2-202ENST00000596399 CD3DP04234 171 aa11.69□□□□□ -0.54
LIM2-202ENST00000596399 RBMY1A1P0DJD3 496 aaKnown RBP11.69□□□□□ -0.54
LIM2-202ENST00000596399 RBMY1CP0DJD4 496 aa11.69□□□□□ -0.54
LIM2-202ENST00000596399 AKR1C2P52895 323 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms