RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 ARL3P36405 182 aa19.75■□□□□ 0.75
TRIM28-204ENST00000594806 DEFA6Q01524 100 aa19.75■□□□□ 0.75
TRIM28-204ENST00000594806 PVRIGQ6DKI7 326 aa19.75■□□□□ 0.75
TRIM28-204ENST00000594806 REC114Q7Z4M0 266 aa19.75■□□□□ 0.75
TRIM28-204ENST00000594806 C21orf62Q9NYP8 219 aa19.75■□□□□ 0.75
TRIM28-204ENST00000594806 HSPB7Q9UBY9 170 aa19.75■□□□□ 0.75
TRIM28-204ENST00000594806 CEBPZOSA8MTT3 80 aa19.74■□□□□ 0.75
TRIM28-204ENST00000594806 K7EIM0 57 aa19.74■□□□□ 0.75
TRIM28-204ENST00000594806 CLEC3BP05452 202 aa19.74■□□□□ 0.75
TRIM28-204ENST00000594806 HTR2BP41595 481 aa19.74■□□□□ 0.75
TRIM28-204ENST00000594806 TNFRSF9Q07011 255 aa19.74■□□□□ 0.75
TRIM28-204ENST00000594806 GPHB5Q86YW7 130 aa19.74■□□□□ 0.75
TRIM28-204ENST00000594806 OR1S1Q8NH92 325 aa19.74■□□□□ 0.75
TRIM28-204ENST00000594806 SCARB1Q8WTV0 552 aa19.74■□□□□ 0.75
TRIM28-204ENST00000594806 HIPK2Q9H2X6 1198 aa19.74■□□□□ 0.75
TRIM28-204ENST00000594806 HEYLQ9NQ87 328 aaPredicted RBP19.74■□□□□ 0.75
TRIM28-204ENST00000594806 NUDT15Q9NV35 164 aa19.74■□□□□ 0.75
TRIM28-204ENST00000594806 FAM90A26D6RGX4 464 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 PITX3O75364 302 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 IGHV3-23P01764 117 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 RNASE2P10153 161 aaKnown RBP19.73■□□□□ 0.75
TRIM28-204ENST00000594806 BSXQ3C1V8 233 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 NOXA1Q86UR1 476 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 OR9G4Q8NGQ1 327 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 MISP3Q96FF7 219 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 OR4C12Q96R67 309 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 TXN2Q99757 166 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 PEMTQ9UBM1 199 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 S4R3C0 116 aa19.73■□□□□ 0.75
TRIM28-204ENST00000594806 PPP5D1E7EU14 171 aa19.72■□□□□ 0.75
TRIM28-204ENST00000594806 IFNA21P01568 189 aa19.72■□□□□ 0.75
TRIM28-204ENST00000594806 HOXB5P09067 269 aa19.72■□□□□ 0.75
TRIM28-204ENST00000594806 H2AFB2P0C5Z0 115 aa19.72■□□□□ 0.75
TRIM28-204ENST00000594806 FCGR2BP31994 310 aaPredicted RBP19.72■□□□□ 0.75
TRIM28-204ENST00000594806 SYNJ2BPP57105 145 aa19.72■□□□□ 0.75
TRIM28-204ENST00000594806 DEFA1P59665 94 aa19.72■□□□□ 0.75
TRIM28-204ENST00000594806 DEFA3P59666 94 aa19.72■□□□□ 0.75
TRIM28-204ENST00000594806 SPSB3Q6PJ21 355 aa19.72■□□□□ 0.75
TRIM28-204ENST00000594806 ENKURQ8TC29 256 aa19.72■□□□□ 0.75
TRIM28-204ENST00000594806 MITD1Q8WV92 249 aa19.72■□□□□ 0.75
TRIM28-204ENST00000594806 BSCL2Q96G97 398 aaPredicted RBP19.72■□□□□ 0.75
TRIM28-204ENST00000594806 TRAV6A0A075B6T7 132 aa19.71■□□□□ 0.75
TRIM28-204ENST00000594806 I3L2K1 104 aa19.71■□□□□ 0.75
TRIM28-204ENST00000594806 LGALS9O00182 355 aa19.71■□□□□ 0.75
TRIM28-204ENST00000594806 IFITM3Q01628 133 aa19.71■□□□□ 0.75
TRIM28-204ENST00000594806 GGNBP1Q5YKI7 109 aa19.71■□□□□ 0.75
TRIM28-204ENST00000594806 PLET1Q6UQ28 207 aa19.71■□□□□ 0.75
TRIM28-204ENST00000594806 SAP30O75446 220 aa19.7■□□□□ 0.74
TRIM28-204ENST00000594806 MED6O75586 246 aa19.7■□□□□ 0.74
TRIM28-204ENST00000594806 MT-CO2P00403 227 aa19.7■□□□□ 0.74
TRIM28-204ENST00000594806 GPR183P32249 361 aa19.7■□□□□ 0.74
TRIM28-204ENST00000594806 MFAP4P55083 255 aa19.7■□□□□ 0.74
TRIM28-204ENST00000594806 ATP5IP56385 69 aaPredicted RBP19.7■□□□□ 0.74
TRIM28-204ENST00000594806 FAM106AQ4KMX7 169 aa19.7■□□□□ 0.74
TRIM28-204ENST00000594806 C2orf83Q53S99 150 aa19.7■□□□□ 0.74
TRIM28-204ENST00000594806 SIGLEC8Q9NYZ4 499 aa19.7■□□□□ 0.74
TRIM28-204ENST00000594806 U3KQ87 197 aa19.7■□□□□ 0.74
TRIM28-204ENST00000594806 TGOLN2O43493 480 aa19.69■□□□□ 0.74
TRIM28-204ENST00000594806 OR2C1O95371 312 aa19.69■□□□□ 0.74
TRIM28-204ENST00000594806 DUSP18Q8NEJ0 188 aa19.69■□□□□ 0.74
TRIM28-204ENST00000594806 SLC24A4Q8NFF2 622 aa19.69■□□□□ 0.74
TRIM28-204ENST00000594806 LY86O95711 162 aa19.68■□□□□ 0.74
TRIM28-204ENST00000594806 DTD1Q8TEA8 209 aa19.68■□□□□ 0.74
TRIM28-204ENST00000594806 PINX1Q96BK5 328 aaKnown RBP19.68■□□□□ 0.74
TRIM28-204ENST00000594806 RBKSQ9H477 322 aa19.68■□□□□ 0.74
TRIM28-204ENST00000594806 Q56UQ5 140 aa19.67■□□□□ 0.74
TRIM28-204ENST00000594806 RNASEH2CQ8TDP1 164 aaKnown RBP19.67■□□□□ 0.74
TRIM28-204ENST00000594806 ZNF431Q8TF32 576 aaPredicted RBP19.67■□□□□ 0.74
TRIM28-204ENST00000594806 SORL1Q92673 2214 aa19.67■□□□□ 0.74
TRIM28-204ENST00000594806 IGHV3-21A0A0B4J1V1 117 aa19.66■□□□□ 0.74
TRIM28-204ENST00000594806 RPS10-NUDT3A0A1W2PQS6 291 aa19.66■□□□□ 0.74
TRIM28-204ENST00000594806 OR2T8A6NH00 312 aa19.66■□□□□ 0.74
TRIM28-204ENST00000594806 F8W735 103 aaPredicted RBP19.66■□□□□ 0.74
TRIM28-204ENST00000594806 NXPH3O95157 252 aa19.66■□□□□ 0.74
TRIM28-204ENST00000594806 NPBWR1P48145 328 aa19.66■□□□□ 0.74
TRIM28-204ENST00000594806 CIB3Q96Q77 187 aaPredicted RBP19.66■□□□□ 0.74
TRIM28-204ENST00000594806 ADAP1O75689 374 aa19.65■□□□□ 0.74
TRIM28-204ENST00000594806 IL5P05113 134 aa19.65■□□□□ 0.74
TRIM28-204ENST00000594806 NPY1RP25929 384 aa19.65■□□□□ 0.74
TRIM28-204ENST00000594806 KRTAP10-11P60412 298 aa19.65■□□□□ 0.74
TRIM28-204ENST00000594806 IL34Q6ZMJ4 242 aa19.65■□□□□ 0.74
TRIM28-204ENST00000594806 OR52B4Q8NGK2 314 aa19.65■□□□□ 0.74
TRIM28-204ENST00000594806 ZNF436Q9C0F3 470 aaPredicted RBP19.65■□□□□ 0.74
TRIM28-204ENST00000594806 PALMDQ9NP74 551 aa19.65■□□□□ 0.74
TRIM28-204ENST00000594806 NUPL2O15504 423 aaKnown RBP19.64■□□□□ 0.73
TRIM28-204ENST00000594806 IFNA10P01566 189 aa19.64■□□□□ 0.73
TRIM28-204ENST00000594806 CSN3P07498 182 aa19.64■□□□□ 0.73
TRIM28-204ENST00000594806 OPRK1P41145 380 aa19.64■□□□□ 0.73
TRIM28-204ENST00000594806 UBAC2Q8NBM4 344 aa19.64■□□□□ 0.73
TRIM28-204ENST00000594806 AURKAIP1Q9NWT8 199 aaPredicted RBP19.64■□□□□ 0.73
TRIM28-204ENST00000594806 A8MWP6 167 aa19.63■□□□□ 0.73
TRIM28-204ENST00000594806 GNG7O60262 68 aa19.63■□□□□ 0.73
TRIM28-204ENST00000594806 ELLP55199 621 aaPredicted RBP19.63■□□□□ 0.73
TRIM28-204ENST00000594806 RELQ04864 619 aaPredicted RBP19.63■□□□□ 0.73
TRIM28-204ENST00000594806 ETFRF1Q6IPR1 90 aa19.63■□□□□ 0.73
TRIM28-204ENST00000594806 NRARPQ7Z6K4 114 aa19.63■□□□□ 0.73
TRIM28-204ENST00000594806 NDUFA4O00483 81 aa19.62■□□□□ 0.73
TRIM28-204ENST00000594806 SYNGR2O43760 224 aa19.62■□□□□ 0.73
TRIM28-204ENST00000594806 SCGB2A1O75556 95 aa19.62■□□□□ 0.73
TRIM28-204ENST00000594806 IGLV1-51P01701 117 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms