RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 OR2T10Q8NGZ9 312 aa9.55□□□□□ -0.88
NPC1-214ENST00000593280 EAF1Q96JC9 268 aaPredicted RBP9.55□□□□□ -0.88
NPC1-214ENST00000593280 LPAR2Q9HBW0 351 aa9.55□□□□□ -0.88
NPC1-214ENST00000593280 MANBALQ9NQG1 85 aa9.55□□□□□ -0.88
NPC1-214ENST00000593280 VAX2Q9UIW0 290 aa9.55□□□□□ -0.88
NPC1-214ENST00000593280 POLR3KQ9Y2Y1 108 aaPredicted RBP9.55□□□□□ -0.88
NPC1-214ENST00000593280 VPS13CQ709C8 3753 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 IGHV4-61A0A0C4DH41 118 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 FAM74A7A6NL05 159 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 NDUFA3O95167 84 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 AREGP15514 252 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 PAX6P26367 422 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 TAGLN2P37802 199 aaKnown RBP9.54□□□□□ -0.88
NPC1-214ENST00000593280 PRR20EP86478 221 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 PRR20CP86479 221 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 PRR20DP86480 221 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 PRR20BP86481 221 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 PRR20AP86496 221 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 FAM74A3Q4VXF1 159 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 DYNAPQ8N1N2 210 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 SRSF12Q8WXF0 261 aaKnown RBP9.54□□□□□ -0.88
NPC1-214ENST00000593280 PERPQ96FX8 193 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 ACY3Q96HD9 319 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 SLC45A2Q9UMX9 530 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 TACC2O95359 2948 aa9.54□□□□□ -0.88
NPC1-214ENST00000593280 A1L4Q6 167 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 TEX22C9J3V5 150 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 NUPL2O15504 423 aaKnown RBP9.53□□□□□ -0.88
NPC1-214ENST00000593280 CNIH1O95406 144 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 FBP1P09467 338 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 CD24P25063 80 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 OR10J1P30954 320 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 PSMB3P49720 205 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 RHOBP62745 196 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 MLANAQ16655 118 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 CRYBG3Q68DQ2 2970 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 C17orf50Q8WW18 174 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 SRSF8Q9BRL6 282 aaKnown RBP9.53□□□□□ -0.88
NPC1-214ENST00000593280 TMPRSS5Q9H3S3 457 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 IGKV1OR2-108A0A075B7D4 117 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 M0R036 132 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 CORTO00230 105 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 FCN1O00602 326 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 LINC00869P0C866 280 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 APELAP0DMC3 54 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 SSBP2P81877 361 aaPredicted RBP9.53□□□□□ -0.88
NPC1-214ENST00000593280 MEF2BQ02080 365 aaPredicted RBP9.53□□□□□ -0.88
NPC1-214ENST00000593280 TMEM249Q2WGJ8 235 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 AKIRIN2Q53H80 203 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 AWAT1Q58HT5 328 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 PVRIGQ6DKI7 326 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 ETFRF1Q6IPR1 90 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 SLC35E3Q7Z769 313 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 OR1P1Q8NH06 330 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 OR2T6Q8NHC8 308 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 MALSU1Q96EH3 234 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 MISP3Q96FF7 219 aa9.53□□□□□ -0.88
NPC1-214ENST00000593280 FNDC4Q9H6D8 234 aaPredicted RBP9.53□□□□□ -0.88
NPC1-214ENST00000593280 IGHV4-30-2A0A087WSY4 118 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 CXorf1O96002 111 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 PAX1P15863 534 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 SAA4P35542 130 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 DSCR9P59020 149 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 C5orf64Q2M2E5 130 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 TMEM88Q6PEY1 159 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 CBLN2Q8IUK8 224 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 Q8N6K4 173 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 ABHD5Q8WTS1 349 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 C22orf15Q8WYQ4 148 aa9.52□□□□□ -0.89
NPC1-214ENST00000593280 PUS1Q9Y606 427 aaKnown RBP eCLIP9.52□□□□□ -0.89
NPC1-214ENST00000593280 F11RQ9Y624 299 aaKnown RBP9.52□□□□□ -0.89
NPC1-214ENST00000593280 TSPAN4O14817 238 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 NPFFO15130 113 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 STAG3L2P0CL84 134 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 STAG3L3P0CL85 134 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 ARL14EPLP0DKL9 152 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 TMEM11P17152 192 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 MFAP2P55001 183 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 PAX8Q06710 450 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 EBI3Q14213 229 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 RHEBQ15382 184 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 FBLN7Q53RD9 439 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 CYP2G1PQ6ZSU1 146 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 NPIPB3Q92617 1050 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 NRGNQ92686 78 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 NIPSNAP3BQ9BS92 247 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 C20orf24Q9BUV8 137 aa9.51□□□□□ -0.89
NPC1-214ENST00000593280 SPTAN1Q13813 2472 aaKnown RBP9.5□□□□□ -0.89
NPC1-214ENST00000593280 NCBP2LA6PVI3 153 aaKnown RBP9.5□□□□□ -0.89
NPC1-214ENST00000593280 H3BQ15 152 aa9.5□□□□□ -0.89
NPC1-214ENST00000593280 TSPAN9O75954 239 aa9.5□□□□□ -0.89
NPC1-214ENST00000593280 MT-CO2P00403 227 aa9.5□□□□□ -0.89
NPC1-214ENST00000593280 FAM106CPP0CH98 169 aa9.5□□□□□ -0.89
NPC1-214ENST00000593280 BRS3P32247 399 aa9.5□□□□□ -0.89
NPC1-214ENST00000593280 RND2P52198 227 aa9.5□□□□□ -0.89
NPC1-214ENST00000593280 CD81P60033 236 aa9.5□□□□□ -0.89
NPC1-214ENST00000593280 FXYD3Q14802 87 aa9.5□□□□□ -0.89
NPC1-214ENST00000593280 FAM90A2PQ658T7 463 aa9.5□□□□□ -0.89
NPC1-214ENST00000593280 C19orf35Q6ZS72 473 aa9.5□□□□□ -0.89
NPC1-214ENST00000593280 THAP8Q8NA92 274 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms