RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	TMEM56	Q96MV1	263 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	FXYD6	Q9H0Q3	95 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	MS4A6A	Q9H2W1	248 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	HRH4	Q9H3N8	390 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	VSIR	Q9H7M9	311 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	EHF	Q9NZC4	300 aa		13.27	□□□□□ -0.29
CIRBP-238	ENST00000592412	IGHV4-28	A0A0C4DH34	117 aa		13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	MT-CO2	P00403	227 aa		13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	SMIM18	P0DKX4	95 aa		13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	MFAP4	P55083	255 aa		13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	TOMM20L	Q6UXN7	152 aa		13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	MISP3	Q96FF7	219 aa		13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	TXN2	Q99757	166 aa		13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	ZFAND3	Q9H8U3	227 aa		13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	PRND	Q9UKY0	176 aa		13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	ANAPC10	Q9UM13	185 aa		13.26	□□□□□ -0.29
CIRBP-238	ENST00000592412	C11orf94	C9JXX5	98 aa		13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412	SNAPC5	O75971	98 aa		13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412	DFFB	O76075	338 aa		13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412	CBX5	P45973	191 aa		13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412	LSM3	P62310	102 aa	Known RBP	13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412	IDNK	Q5T6J7	187 aa		13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412		Q6ZTC4	211 aa		13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412	ZNF114	Q8NC26	417 aa		13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412	BORCS5	Q969J3	196 aa		13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412	CMTM3	Q96MX0	182 aa		13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412	AGRN	O00468	2067 aa		13.25	□□□□□ -0.29
CIRBP-238	ENST00000592412	HSPG2	P98160	4391 aa		13.24	□□□□□ -0.29
CIRBP-238	ENST00000592412	IGHV3-66	A0A0C4DH42	116 aa		13.24	□□□□□ -0.29
CIRBP-238	ENST00000592412	XRCC3	O43542	346 aa		13.24	□□□□□ -0.29
CIRBP-238	ENST00000592412	IGKV1-39	P01597	117 aa		13.24	□□□□□ -0.29
CIRBP-238	ENST00000592412	IGKV1D-39	P04432	117 aa		13.24	□□□□□ -0.29
CIRBP-238	ENST00000592412	HLA-DMB	P28068	263 aa		13.24	□□□□□ -0.29
CIRBP-238	ENST00000592412	TGFBR1	P36897	503 aa		13.24	□□□□□ -0.29
CIRBP-238	ENST00000592412	FUNDC2	Q9BWH2	189 aa		13.24	□□□□□ -0.29
CIRBP-238	ENST00000592412	MRPS26	Q9BYN8	205 aa	Known RBP	13.24	□□□□□ -0.29
CIRBP-238	ENST00000592412		X6R8D5	127 aa		13.24	□□□□□ -0.29
CIRBP-238	ENST00000592412	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.23	□□□□□ -0.29
CIRBP-238	ENST00000592412	ST8SIA3	O43173	380 aa		13.23	□□□□□ -0.29
CIRBP-238	ENST00000592412	PMP2	P02689	132 aa		13.23	□□□□□ -0.29
CIRBP-238	ENST00000592412	C4BPB	P20851	252 aa		13.23	□□□□□ -0.29
CIRBP-238	ENST00000592412	PAFAH1B2	P68402	229 aa		13.23	□□□□□ -0.29
CIRBP-238	ENST00000592412	LINC00336	Q6ZUF6	198 aa		13.23	□□□□□ -0.29
CIRBP-238	ENST00000592412	TRPT1	Q86TN4	253 aa	Known RBP	13.23	□□□□□ -0.29
CIRBP-238	ENST00000592412	SEC22A	Q96IW7	307 aa		13.23	□□□□□ -0.29
CIRBP-238	ENST00000592412	DIABLO	Q9NR28	239 aa		13.23	□□□□□ -0.29
CIRBP-238	ENST00000592412	FKBP11	Q9NYL4	201 aa		13.23	□□□□□ -0.29
CIRBP-238	ENST00000592412	IGHV4-4	A0A075B6R2	117 aa		13.22	□□□□□ -0.29
CIRBP-238	ENST00000592412	TRAV2	A0A0B4J234	112 aa		13.22	□□□□□ -0.29
CIRBP-238	ENST00000592412		A0A1B0GU03	582 aa		13.22	□□□□□ -0.29
CIRBP-238	ENST00000592412	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.22	□□□□□ -0.29
CIRBP-238	ENST00000592412	GNG7	O60262	68 aa		13.22	□□□□□ -0.29
CIRBP-238	ENST00000592412	PRCD	Q00LT1	54 aa		13.22	□□□□□ -0.29
CIRBP-238	ENST00000592412	PINX1	Q96BK5	328 aa	Known RBP	13.22	□□□□□ -0.29
CIRBP-238	ENST00000592412	TSC22D3	Q99576	134 aa		13.22	□□□□□ -0.29
CIRBP-238	ENST00000592412	IFT46	Q9NQC8	304 aa		13.22	□□□□□ -0.29
CIRBP-238	ENST00000592412	DNASE2	O00115	360 aa	Predicted RBP	13.21	□□□□□ -0.29
CIRBP-238	ENST00000592412	GPR31	O00270	319 aa		13.21	□□□□□ -0.29
CIRBP-238	ENST00000592412	CD5	P06127	495 aa		13.21	□□□□□ -0.29
CIRBP-238	ENST00000592412	NAT1	P18440	290 aa		13.21	□□□□□ -0.29
CIRBP-238	ENST00000592412	CROCCP3	Q8IVE0	287 aa		13.21	□□□□□ -0.29
CIRBP-238	ENST00000592412	STH	Q8IWL8	128 aa		13.21	□□□□□ -0.29
CIRBP-238	ENST00000592412	GINS3	Q9BRX5	216 aa		13.21	□□□□□ -0.29
CIRBP-238	ENST00000592412	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
CIRBP-238	ENST00000592412	TRAV10	A0A0B4J240	114 aa		13.2	□□□□□ -0.3
CIRBP-238	ENST00000592412	RTL8C	O15255	209 aa		13.2	□□□□□ -0.3
CIRBP-238	ENST00000592412	MIF	P14174	115 aa		13.2	□□□□□ -0.3
CIRBP-238	ENST00000592412	RPS19	P39019	145 aa	Known RBP	13.2	□□□□□ -0.3
CIRBP-238	ENST00000592412	NCS1	P62166	190 aa		13.2	□□□□□ -0.3
CIRBP-238	ENST00000592412	PHLDA2	Q53GA4	152 aa		13.2	□□□□□ -0.3
CIRBP-238	ENST00000592412	CMTM1	Q8IZ96	169 aa		13.2	□□□□□ -0.3
CIRBP-238	ENST00000592412	CSNK1G2-AS1	Q8NCQ2	148 aa		13.2	□□□□□ -0.3
CIRBP-238	ENST00000592412	CELA1	Q9UNI1	258 aa		13.2	□□□□□ -0.3
CIRBP-238	ENST00000592412		K7EQG2	157 aa		13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	TMEM127	O75204	238 aa		13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	EIF4E	P06730	217 aa	Known RBP	13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	MED14OS	P0DP75	135 aa		13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	SPINK9	Q5DT21	86 aa		13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	ZNF600	Q6ZNG1	722 aa		13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	LYSMD2	Q8IV50	215 aa		13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	DUSP18	Q8NEJ0	188 aa		13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	SCRT1	Q9BWW7	348 aa		13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	RABAC1	Q9UI14	185 aa		13.19	□□□□□ -0.3
CIRBP-238	ENST00000592412	KNCN	A6PVL3	124 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	HSPE1	P61604	102 aa	Known RBP	13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	VBP1	P61758	197 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	RPL11	P62913	178 aa	Known RBP	13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	IZUMO4	Q1ZYL8	232 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	PVRIG	Q6DKI7	326 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	GPR141	Q7Z602	305 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	TBC1D26	Q86UD7	250 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	OR5H2	Q8NGV7	314 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	MRGPRF	Q96AM1	343 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	RNF126	Q9BV68	326 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	CLEC5A	Q9NY25	188 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	MRPL36	Q9P0J6	103 aa	Known RBP	13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	MUC4	Q99102	2169 aa		13.18	□□□□□ -0.3
CIRBP-238	ENST00000592412	TMEM50A	O95807	157 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms