RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 C15orf40Q8WUR7 153 aa13.94□□□□□ -0.18
CCDC43-205ENST00000592333 MISP3Q96FF7 219 aa13.94□□□□□ -0.18
CCDC43-205ENST00000592333 ZNF414Q96IQ9 312 aa13.94□□□□□ -0.18
CCDC43-205ENST00000592333 TRAV2A0A0B4J234 112 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 CORTO00230 105 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 GNG7O60262 68 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 B3GALNT1O75752 331 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 YIF1AO95070 293 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 RORCP51449 518 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 PVRIGQ6DKI7 326 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 MZT2AQ6P582 158 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 SNX29P2Q8IUI4 249 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 MRGPRFQ96AM1 343 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 FUNDC2Q9BWH2 189 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 CSTL1Q9H114 145 aa13.93□□□□□ -0.18
CCDC43-205ENST00000592333 ZNF207O43670 478 aaKnown RBP13.92□□□□□ -0.18
CCDC43-205ENST00000592333 ELK1P19419 428 aa13.92□□□□□ -0.18
CCDC43-205ENST00000592333 LHFPL1Q86WI0 220 aa13.92□□□□□ -0.18
CCDC43-205ENST00000592333 DUSP18Q8NEJ0 188 aa13.92□□□□□ -0.18
CCDC43-205ENST00000592333 AP3S1Q92572 193 aa13.92□□□□□ -0.18
CCDC43-205ENST00000592333 IGHV3OR16-8A0A075B7F1 116 aa13.91□□□□□ -0.18
CCDC43-205ENST00000592333 MPTX1A8MV57 137 aa13.91□□□□□ -0.18
CCDC43-205ENST00000592333 DFFBO76075 338 aa13.91□□□□□ -0.18
CCDC43-205ENST00000592333 SNCAP37840 140 aa13.91□□□□□ -0.18
CCDC43-205ENST00000592333 SUB1P53999 127 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCDC43-205ENST00000592333 NCS1P62166 190 aa13.91□□□□□ -0.18
CCDC43-205ENST00000592333 RNASE10Q5GAN6 216 aaKnown RBP13.91□□□□□ -0.18
CCDC43-205ENST00000592333 DMRTA1Q5VZB9 504 aa13.91□□□□□ -0.18
CCDC43-205ENST00000592333 VSIRQ9H7M9 311 aa13.91□□□□□ -0.18
CCDC43-205ENST00000592333 P0C879 139 aa13.9□□□□□ -0.18
CCDC43-205ENST00000592333 RPL35AP18077 110 aaKnown RBP13.9□□□□□ -0.18
CCDC43-205ENST00000592333 VBP1P61758 197 aa13.9□□□□□ -0.18
CCDC43-205ENST00000592333 PMS2P11Q13670 270 aa13.9□□□□□ -0.18
CCDC43-205ENST00000592333 ZNF600Q6ZNG1 722 aa13.9□□□□□ -0.18
CCDC43-205ENST00000592333 TMEM231Q9H6L2 316 aa13.9□□□□□ -0.18
CCDC43-205ENST00000592333 ALMS1Q8TCU4 4167 aa13.9□□□□□ -0.18
CCDC43-205ENST00000592333 HPGDSO60760 199 aa13.89□□□□□ -0.19
CCDC43-205ENST00000592333 SCGB2A1O75556 95 aa13.89□□□□□ -0.19
CCDC43-205ENST00000592333 LY6G6CO95867 125 aa13.89□□□□□ -0.19
CCDC43-205ENST00000592333 PIGPP57054 158 aa13.89□□□□□ -0.19
CCDC43-205ENST00000592333 EWSR1Q01844 656 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCDC43-205ENST00000592333 TOMM20LQ6UXN7 152 aa13.89□□□□□ -0.19
CCDC43-205ENST00000592333 APRG1Q8IVJ8 170 aa13.89□□□□□ -0.19
CCDC43-205ENST00000592333 ZFAND1Q8TCF1 268 aa13.89□□□□□ -0.19
CCDC43-205ENST00000592333 PINX1Q96BK5 328 aaKnown RBP13.89□□□□□ -0.19
CCDC43-205ENST00000592333 PDCD10Q9BUL8 212 aa13.89□□□□□ -0.19
CCDC43-205ENST00000592333 MTFP1Q9UDX5 166 aa13.89□□□□□ -0.19
CCDC43-205ENST00000592333 C3orf85A0A1B0GTC6 90 aa13.88□□□□□ -0.19
CCDC43-205ENST00000592333 PGAM2P15259 253 aa13.88□□□□□ -0.19
CCDC43-205ENST00000592333 RPL5P46777 297 aaKnown RBP13.88□□□□□ -0.19
CCDC43-205ENST00000592333 TCF24Q7RTU0 167 aa13.88□□□□□ -0.19
CCDC43-205ENST00000592333 SLC35G3Q8N808 338 aa13.88□□□□□ -0.19
CCDC43-205ENST00000592333 CCDC71LQ8N9Z2 235 aa13.88□□□□□ -0.19
CCDC43-205ENST00000592333 RARRES2Q99969 163 aa13.88□□□□□ -0.19
CCDC43-205ENST00000592333 MFFQ9GZY8 342 aa13.88□□□□□ -0.19
CCDC43-205ENST00000592333 C11orf68Q9H3H3 251 aaKnown RBP13.88□□□□□ -0.19
CCDC43-205ENST00000592333 KLK11Q9UBX7 282 aa13.88□□□□□ -0.19
CCDC43-205ENST00000592333 A0A0B4J293 547 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 A0A1W2PS18 150 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 FAM25AB3EWG3 89 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 FAM25CB3EWG5 89 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 FAM25GB3EWG6 89 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 M0QYG6 137 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 TMEM50AO95807 157 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 IGKV1-5P01602 117 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 ZNF182P17025 639 aaPredicted RBP13.87□□□□□ -0.19
CCDC43-205ENST00000592333 AKR1C2P52895 323 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 SSBP1Q04837 148 aaKnown RBP13.87□□□□□ -0.19
CCDC43-205ENST00000592333 FAM219AQ8IW50 185 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 TERB2Q8NHR7 220 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 TP53RKQ96S44 253 aa13.87□□□□□ -0.19
CCDC43-205ENST00000592333 ST8SIA3O43173 380 aa13.86□□□□□ -0.19
CCDC43-205ENST00000592333 IFNA17P01571 189 aa13.86□□□□□ -0.19
CCDC43-205ENST00000592333 CD74P04233 296 aa13.86□□□□□ -0.19
CCDC43-205ENST00000592333 CD3DP04234 171 aa13.86□□□□□ -0.19
CCDC43-205ENST00000592333 AARDQ4LEZ3 155 aa13.86□□□□□ -0.19
CCDC43-205ENST00000592333 RRNAD1Q96FB5 475 aaKnown RBP13.86□□□□□ -0.19
CCDC43-205ENST00000592333 ZFAND3Q9H8U3 227 aa13.86□□□□□ -0.19
CCDC43-205ENST00000592333 COPZ2Q9P299 210 aa13.86□□□□□ -0.19
CCDC43-205ENST00000592333 PUS1Q9Y606 427 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCDC43-205ENST00000592333 TRAV30A0A087WSZ9 112 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 DNASE2O00115 360 aaPredicted RBP13.85□□□□□ -0.19
CCDC43-205ENST00000592333 GABARAPO95166 117 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 RNASE2P10153 161 aaKnown RBP13.85□□□□□ -0.19
CCDC43-205ENST00000592333 NPPCP23582 126 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 UCP1P25874 307 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 TFPI2P48307 235 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 TAS2R19P59542 299 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 TMEM41BQ5BJD5 291 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 LGALS9CQ6DKI2 356 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 TMEM229BQ8NBD8 167 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 OR4X1Q8NH49 305 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 OR52E5Q8NH55 327 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 PHLDA1Q8WV24 401 aaPredicted RBP13.85□□□□□ -0.19
CCDC43-205ENST00000592333 ST8SIA2Q92186 375 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 MS4A6AQ9H2W1 248 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 ENY2Q9NPA8 101 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 CACFD1Q9UGQ2 172 aa13.85□□□□□ -0.19
CCDC43-205ENST00000592333 IGHV3-49A0A0A0MS15 119 aa13.84□□□□□ -0.19
CCDC43-205ENST00000592333 CLN5O75503 358 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms