RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 TMEM116Q8NCL8 245 aa7.53□□□□□ -1.2
VMP1-214ENST00000592106 SLC25A46Q96AG3 418 aa7.53□□□□□ -1.2
VMP1-214ENST00000592106 PDCD10Q9BUL8 212 aa7.53□□□□□ -1.2
VMP1-214ENST00000592106 SACSQ9NZJ4 4579 aa7.52□□□□□ -1.2
VMP1-214ENST00000592106 IGHV3OR16-8A0A075B7F1 116 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 LY6G6CO95867 125 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 APOA1P02647 267 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 PGAM2P15259 253 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 RPL35AP18077 110 aaKnown RBP7.52□□□□□ -1.21
VMP1-214ENST00000592106 NPBWR1P48145 328 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 MFAP2P55001 183 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 CEMP1Q6PRD7 247 aaPredicted RBP7.52□□□□□ -1.21
VMP1-214ENST00000592106 SLC35G3Q8N808 338 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 GPX8Q8TED1 209 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 MRGPRFQ96AM1 343 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 RNF183Q96D59 192 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 YIPF6Q96EC8 236 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 RHPN1-AS1Q9BWJ2 59 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 TMEM231Q9H6L2 316 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 COMMD3Q9UBI1 195 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 SMPXQ9UHP9 88 aa7.52□□□□□ -1.21
VMP1-214ENST00000592106 TRAV14DV4A0A0A6YYC5 116 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 CORTO00230 105 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 CHEK1O14757 476 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 MT-CO2P00403 227 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 CTSGP08311 255 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 ADMP35318 185 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 SNCAP37840 140 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 AKR1C2P52895 323 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 HSPE1P61604 102 aaKnown RBP7.51□□□□□ -1.21
VMP1-214ENST00000592106 RNASE10Q5GAN6 216 aaKnown RBP7.51□□□□□ -1.21
VMP1-214ENST00000592106 MZT2AQ6P582 158 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 SNX29P2Q8IUI4 249 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 DUSP18Q8NEJ0 188 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 GATAD1Q8WUU5 269 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 AP3S1Q92572 193 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 PINX1Q96BK5 328 aaKnown RBP7.51□□□□□ -1.21
VMP1-214ENST00000592106 ZNF486Q96H40 463 aaPredicted RBP7.51□□□□□ -1.21
VMP1-214ENST00000592106 SEC22AQ96IW7 307 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 OR10C1Q96KK4 312 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 RNF2Q99496 336 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 NXF2Q9GZY0 626 aaKnown RBP7.51□□□□□ -1.21
VMP1-214ENST00000592106 MFFQ9GZY8 342 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 MAP6D1Q9H9H5 199 aa7.51□□□□□ -1.21
VMP1-214ENST00000592106 IGKV3-7A0A075B6H7 116 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 MPTX1A8MV57 137 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 FAM25AB3EWG3 89 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 FAM25CB3EWG5 89 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 FAM25GB3EWG6 89 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 I3L2K1 104 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 TFPI2P48307 235 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 HOXA1P49639 335 aaPredicted RBP7.5□□□□□ -1.21
VMP1-214ENST00000592106 SUB1P53999 127 aaKnown RBP eCLIP7.5□□□□□ -1.21
VMP1-214ENST00000592106 RND3P61587 244 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 ZNF600Q6ZNG1 722 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 CCDC71LQ8N9Z2 235 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 RNASE11Q8TAA1 199 aaKnown RBP7.5□□□□□ -1.21
VMP1-214ENST00000592106 NARS2Q96I59 477 aaKnown RBP7.5□□□□□ -1.21
VMP1-214ENST00000592106 CSTL1Q9H114 145 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 ENY2Q9NPA8 101 aa7.5□□□□□ -1.21
VMP1-214ENST00000592106 SCO2A0A1W2PP80 73 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 DBX1A6NMT0 343 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 DNASE2O00115 360 aaPredicted RBP7.49□□□□□ -1.21
VMP1-214ENST00000592106 ST8SIA3O43173 380 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 DFFBO76075 338 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 IFNA17P01571 189 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 TBPP20226 339 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 RORCP51449 518 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 TRIM16LQ309B1 348 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 TCF24Q7RTU0 167 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 LYSMD2Q8IV50 215 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 APRG1Q8IVJ8 170 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 ARRDC1Q8N5I2 433 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 C15orf40Q8WUR7 153 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 COPZ2Q9P299 210 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 CSMD3Q7Z407 3707 aa7.49□□□□□ -1.21
VMP1-214ENST00000592106 IGHV3-49A0A0A0MS15 119 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 TRAV2A0A0B4J234 112 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 A0A1W2PS18 150 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 M0QYG6 137 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 B3GALNT1O75752 331 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 IGKV1-39P01597 117 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 IGKV1D-39P04432 117 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 IFNA4P05014 189 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 PIGPP57054 158 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 VBP1P61758 197 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 NCS1P62166 190 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 ZFAND1Q8TCF1 268 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 PHLDA1Q8WV24 401 aaPredicted RBP7.48□□□□□ -1.21
VMP1-214ENST00000592106 RRNAD1Q96FB5 475 aaKnown RBP7.48□□□□□ -1.21
VMP1-214ENST00000592106 RARRES2Q99969 163 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 FUNDC2Q9BWH2 189 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 C11orf68Q9H3H3 251 aaKnown RBP7.48□□□□□ -1.21
VMP1-214ENST00000592106 ALMS1Q8TCU4 4167 aa7.48□□□□□ -1.21
VMP1-214ENST00000592106 DNAH1Q9P2D7 4330 aa7.47□□□□□ -1.21
VMP1-214ENST00000592106 C3orf85A0A1B0GTC6 90 aa7.47□□□□□ -1.21
VMP1-214ENST00000592106 RPS10-NUDT3A0A1W2PQS6 291 aa7.47□□□□□ -1.21
VMP1-214ENST00000592106 INS-IGF2F8WCM5 200 aa7.47□□□□□ -1.21
VMP1-214ENST00000592106 HPGDSO60760 199 aa7.47□□□□□ -1.21
VMP1-214ENST00000592106 CA1P00915 261 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms