RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 FAM219AQ8IW50 185 aa16.87■□□□□ 0.29
MBD3-208ENST00000590830 UXS1Q8NBZ7 420 aa16.87■□□□□ 0.29
MBD3-208ENST00000590830 OR2K2Q8NGT1 345 aa16.87■□□□□ 0.29
MBD3-208ENST00000590830 RNASE11Q8TAA1 199 aaKnown RBP16.87■□□□□ 0.29
MBD3-208ENST00000590830 BSCL2Q96G97 398 aaPredicted RBP16.87■□□□□ 0.29
MBD3-208ENST00000590830 ATP6V0BQ99437 205 aa16.87■□□□□ 0.29
MBD3-208ENST00000590830 SDHCQ99643 169 aaPredicted RBP16.87■□□□□ 0.29
MBD3-208ENST00000590830 KCNIP3Q9Y2W7 256 aa16.87■□□□□ 0.29
MBD3-208ENST00000590830 MT-CO2P00403 227 aa16.86■□□□□ 0.29
MBD3-208ENST00000590830 CTSGP08311 255 aa16.86■□□□□ 0.29
MBD3-208ENST00000590830 FRMD6-AS1P0C7T7 363 aa16.86■□□□□ 0.29
MBD3-208ENST00000590830 NHLRC4P0CG21 123 aaPredicted RBP16.86■□□□□ 0.29
MBD3-208ENST00000590830 C8orf88P0DMB2 117 aa16.86■□□□□ 0.29
MBD3-208ENST00000590830 FAUP35544 74 aaKnown RBP16.86■□□□□ 0.29
MBD3-208ENST00000590830 SBSPONQ8IVN8 264 aa16.86■□□□□ 0.29
MBD3-208ENST00000590830 SLC35G3Q8N808 338 aa16.86■□□□□ 0.29
MBD3-208ENST00000590830 UBAC2Q8NBM4 344 aa16.86■□□□□ 0.29
MBD3-208ENST00000590830 DYNLRB2Q8TF09 96 aa16.86■□□□□ 0.29
MBD3-208ENST00000590830 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.86■□□□□ 0.29
MBD3-208ENST00000590830 NDUFA13Q9P0J0 144 aa16.86■□□□□ 0.29
MBD3-208ENST00000590830 MLXQ9UH92 298 aa16.86■□□□□ 0.29
MBD3-208ENST00000590830 IGHV4-30-4P0DP06 118 aa16.85■□□□□ 0.29
MBD3-208ENST00000590830 RNASE2P10153 161 aaKnown RBP16.85■□□□□ 0.29
MBD3-208ENST00000590830 Q56UQ5 140 aa16.85■□□□□ 0.29
MBD3-208ENST00000590830 SPSB3Q6PJ21 355 aa16.85■□□□□ 0.29
MBD3-208ENST00000590830 C19orf73Q9NVV2 129 aa16.85■□□□□ 0.29
MBD3-208ENST00000590830 TECRQ9NZ01 308 aaKnown RBP16.85■□□□□ 0.29
MBD3-208ENST00000590830 CACNG5Q9UF02 275 aa16.85■□□□□ 0.29
MBD3-208ENST00000590830 FCGR2BP31994 310 aaPredicted RBP16.84■□□□□ 0.29
MBD3-208ENST00000590830 SPCS3P61009 180 aa16.84■□□□□ 0.29
MBD3-208ENST00000590830 LYZL2Q7Z4W2 148 aa16.84■□□□□ 0.29
MBD3-208ENST00000590830 OR52E5Q8NH55 327 aa16.84■□□□□ 0.29
MBD3-208ENST00000590830 TMEM190Q8WZ59 177 aa16.84■□□□□ 0.29
MBD3-208ENST00000590830 IL22RA2Q969J5 263 aa16.84■□□□□ 0.29
MBD3-208ENST00000590830 PINX1Q96BK5 328 aaKnown RBP16.84■□□□□ 0.29
MBD3-208ENST00000590830 PDCD10Q9BUL8 212 aa16.84■□□□□ 0.29
MBD3-208ENST00000590830 SNCAP37840 140 aa16.83■□□□□ 0.28
MBD3-208ENST00000590830 HOXA1P49639 335 aaPredicted RBP16.83■□□□□ 0.28
MBD3-208ENST00000590830 MFAP4P55083 255 aa16.83■□□□□ 0.28
MBD3-208ENST00000590830 BSXQ3C1V8 233 aa16.83■□□□□ 0.28
MBD3-208ENST00000590830 ZNF57Q68EA5 555 aaPredicted RBP16.83■□□□□ 0.28
MBD3-208ENST00000590830 TMED4Q7Z7H5 227 aa16.83■□□□□ 0.28
MBD3-208ENST00000590830 DEDD2Q8WXF8 326 aa16.83■□□□□ 0.28
MBD3-208ENST00000590830 WDR89Q96FK6 387 aaPredicted RBP16.83■□□□□ 0.28
MBD3-208ENST00000590830 IGHV3OR16-8A0A075B7F1 116 aa16.82■□□□□ 0.28
MBD3-208ENST00000590830 A8MZ25 164 aa16.82■□□□□ 0.28
MBD3-208ENST00000590830 ELLP55199 621 aaPredicted RBP16.82■□□□□ 0.28
MBD3-208ENST00000590830 MLANAQ16655 118 aa16.82■□□□□ 0.28
MBD3-208ENST00000590830 NMSQ5H8A3 153 aa16.82■□□□□ 0.28
MBD3-208ENST00000590830 TXN2Q99757 166 aa16.82■□□□□ 0.28
MBD3-208ENST00000590830 PALMDQ9NP74 551 aa16.82■□□□□ 0.28
MBD3-208ENST00000590830 UFC1Q9Y3C8 167 aa16.82■□□□□ 0.28
MBD3-208ENST00000590830 NDUFA4O00483 81 aa16.81■□□□□ 0.28
MBD3-208ENST00000590830 BTNL8Q6UX41 500 aa16.81■□□□□ 0.28
MBD3-208ENST00000590830 TMEM61Q8N0U2 210 aa16.81■□□□□ 0.28
MBD3-208ENST00000590830 SLC25A21Q9BQT8 299 aaPredicted RBP16.81■□□□□ 0.28
MBD3-208ENST00000590830 MRPL27Q9P0M9 148 aaKnown RBP16.81■□□□□ 0.28
MBD3-208ENST00000590830 A0A0B4J2A0 478 aa16.8■□□□□ 0.28
MBD3-208ENST00000590830 CD7P09564 240 aa16.8■□□□□ 0.28
MBD3-208ENST00000590830 CCR6P51684 374 aa16.8■□□□□ 0.28
MBD3-208ENST00000590830 GUCA2BQ16661 112 aa16.8■□□□□ 0.28
MBD3-208ENST00000590830 TMEM128Q5BJH2 165 aa16.8■□□□□ 0.28
MBD3-208ENST00000590830 MARC2Q969Z3 335 aa16.8■□□□□ 0.28
MBD3-208ENST00000590830 FNDC4Q9H6D8 234 aaPredicted RBP16.8■□□□□ 0.28
MBD3-208ENST00000590830 ENY2Q9NPA8 101 aa16.8■□□□□ 0.28
MBD3-208ENST00000590830 MRPL36Q9P0J6 103 aaKnown RBP16.8■□□□□ 0.28
MBD3-208ENST00000590830 SHPKQ9UHJ6 478 aa16.8■□□□□ 0.28
MBD3-208ENST00000590830 ZNF207O43670 478 aaKnown RBP16.79■□□□□ 0.28
MBD3-208ENST00000590830 NXPH3O95157 252 aa16.79■□□□□ 0.28
MBD3-208ENST00000590830 SULT1A3P0DMM9 295 aa16.79■□□□□ 0.28
MBD3-208ENST00000590830 SULT1A4P0DMN0 295 aa16.79■□□□□ 0.28
MBD3-208ENST00000590830 SUB1P53999 127 aaKnown RBP eCLIP16.79■□□□□ 0.28
MBD3-208ENST00000590830 ANKRD55Q3KP44 614 aa16.79■□□□□ 0.28
MBD3-208ENST00000590830 GTSCR1Q86UQ5 136 aa16.79■□□□□ 0.28
MBD3-208ENST00000590830 LGI3Q8N145 548 aa16.79■□□□□ 0.28
MBD3-208ENST00000590830 TMEM170AQ8WVE7 144 aa16.79■□□□□ 0.28
MBD3-208ENST00000590830 NEURL2Q9BR09 285 aa16.79■□□□□ 0.28
MBD3-208ENST00000590830 GAR1Q9NY12 217 aaKnown RBP16.79■□□□□ 0.28
MBD3-208ENST00000590830 U3KQK5 164 aa16.79■□□□□ 0.28
MBD3-208ENST00000590830 LINC00854A0A1B0GVQ3 168 aa16.78■□□□□ 0.28
MBD3-208ENST00000590830 K7EMT4 169 aa16.78■□□□□ 0.28
MBD3-208ENST00000590830 NUPL2O15504 423 aaKnown RBP16.78■□□□□ 0.28
MBD3-208ENST00000590830 ANXA3P12429 323 aa16.78■□□□□ 0.28
MBD3-208ENST00000590830 CD81P60033 236 aa16.78■□□□□ 0.28
MBD3-208ENST00000590830 C20orf24Q9BUV8 137 aa16.78■□□□□ 0.28
MBD3-208ENST00000590830 HEYLQ9NQ87 328 aaPredicted RBP16.78■□□□□ 0.28
MBD3-208ENST00000590830 DAZ1Q9NQZ3 744 aaKnown RBP16.78■□□□□ 0.28
MBD3-208ENST00000590830 SCAF4O95104 1147 aaKnown RBP16.77■□□□□ 0.28
MBD3-208ENST00000590830 PPP1R1AQ13522 171 aa16.77■□□□□ 0.28
MBD3-208ENST00000590830 TRIQKQ629K1 86 aa16.77■□□□□ 0.28
MBD3-208ENST00000590830 DUSP18Q8NEJ0 188 aa16.77■□□□□ 0.28
MBD3-208ENST00000590830 WFDC10AQ9H1F0 79 aa16.77■□□□□ 0.28
MBD3-208ENST00000590830 CEBPZOSA8MTT3 80 aa16.76■□□□□ 0.27
MBD3-208ENST00000590830 GNG7O60262 68 aa16.76■□□□□ 0.27
MBD3-208ENST00000590830 SFT2D2O95562 160 aa16.76■□□□□ 0.27
MBD3-208ENST00000590830 TMEM50AO95807 157 aa16.76■□□□□ 0.27
MBD3-208ENST00000590830 HTR2BP41595 481 aa16.76■□□□□ 0.27
MBD3-208ENST00000590830 SRPXP78539 464 aa16.76■□□□□ 0.27
MBD3-208ENST00000590830 SMCO1Q147U7 214 aa16.76■□□□□ 0.27
MBD3-208ENST00000590830 LRTM2Q8N967 370 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms