RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CMTM3Q96MX0 182 aa16.02■□□□□ 0.16
DDX39A-215ENST00000590696 MPTX1A8MV57 137 aa16.01■□□□□ 0.15
DDX39A-215ENST00000590696 GNG7O60262 68 aa16.01■□□□□ 0.15
DDX39A-215ENST00000590696 ERHP84090 104 aaKnown RBP16.01■□□□□ 0.15
DDX39A-215ENST00000590696 PHLDA1Q8WV24 401 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-215ENST00000590696 SCPEP1Q9HB40 452 aa16.01■□□□□ 0.15
DDX39A-215ENST00000590696 VCX3AQ9NNX9 186 aa16.01■□□□□ 0.15
DDX39A-215ENST00000590696 APOA1P02647 267 aa16■□□□□ 0.15
DDX39A-215ENST00000590696 RCVRNP35243 200 aa16■□□□□ 0.15
DDX39A-215ENST00000590696 RARRES2Q99969 163 aa16■□□□□ 0.15
DDX39A-215ENST00000590696 A0A087WXM4 84 aa15.99■□□□□ 0.15
DDX39A-215ENST00000590696 PAFAH1B2P68402 229 aa15.99■□□□□ 0.15
DDX39A-215ENST00000590696 IZUMO4Q1ZYL8 232 aa15.99■□□□□ 0.15
DDX39A-215ENST00000590696 SPINK9Q5DT21 86 aa15.99■□□□□ 0.15
DDX39A-215ENST00000590696 TOMM20LQ6UXN7 152 aa15.99■□□□□ 0.15
DDX39A-215ENST00000590696 TCF24Q7RTU0 167 aa15.99■□□□□ 0.15
DDX39A-215ENST00000590696 GATAD1Q8WUU5 269 aa15.99■□□□□ 0.15
DDX39A-215ENST00000590696 GINS3Q9BRX5 216 aa15.99■□□□□ 0.15
DDX39A-215ENST00000590696 KMT2AQ03164 3969 aa15.98■□□□□ 0.15
DDX39A-215ENST00000590696 M0QYG6 137 aa15.98■□□□□ 0.15
DDX39A-215ENST00000590696 APOHP02749 345 aaPredicted RBP15.97■□□□□ 0.15
DDX39A-215ENST00000590696 ELK1P19419 428 aa15.97■□□□□ 0.15
DDX39A-215ENST00000590696 NCS1P62166 190 aa15.97■□□□□ 0.15
DDX39A-215ENST00000590696 RPP25LQ8N5L8 163 aaKnown RBP15.97■□□□□ 0.15
DDX39A-215ENST00000590696 DUSP18Q8NEJ0 188 aa15.97■□□□□ 0.15
DDX39A-215ENST00000590696 ST8SIA2Q92186 375 aa15.97■□□□□ 0.15
DDX39A-215ENST00000590696 FRAS1Q86XX4 4008 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 ST8SIA3O43173 380 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 HPGDSO60760 199 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 CD5P06127 495 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 PGAM2P15259 253 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 SNCAP37840 140 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 NPBWR1P48145 328 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 VBP1P61758 197 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 LILRB2Q8N423 598 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 OR11H2Q8NH07 326 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 VSIRQ9H7M9 311 aa15.96■□□□□ 0.15
DDX39A-215ENST00000590696 IGHV3-66A0A0C4DH42 116 aa15.95■□□□□ 0.14
DDX39A-215ENST00000590696 DNASE2O00115 360 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-215ENST00000590696 IGKV1-5P01602 117 aa15.95■□□□□ 0.14
DDX39A-215ENST00000590696 PI3P19957 117 aa15.95■□□□□ 0.14
DDX39A-215ENST00000590696 RND3P61587 244 aa15.95■□□□□ 0.14
DDX39A-215ENST00000590696 ZNF600Q6ZNG1 722 aa15.95■□□□□ 0.14
DDX39A-215ENST00000590696 SLC35G3Q8N808 338 aa15.95■□□□□ 0.14
DDX39A-215ENST00000590696 FUNDC2Q9BWH2 189 aa15.95■□□□□ 0.14
DDX39A-215ENST00000590696 MS4A6AQ9H2W1 248 aa15.95■□□□□ 0.14
DDX39A-215ENST00000590696 PUS1Q9Y606 427 aaKnown RBP eCLIP15.95■□□□□ 0.14
DDX39A-215ENST00000590696 A0A0B4J293 547 aa15.94■□□□□ 0.14
DDX39A-215ENST00000590696 DFFBO76075 338 aa15.94■□□□□ 0.14
DDX39A-215ENST00000590696 TNFAIP8O95379 198 aa15.94■□□□□ 0.14
DDX39A-215ENST00000590696 TMEM50AO95807 157 aa15.94■□□□□ 0.14
DDX39A-215ENST00000590696 CA1P00915 261 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-215ENST00000590696 NANOS2P60321 138 aaKnown RBP15.94■□□□□ 0.14
DDX39A-215ENST00000590696 RPL11P62913 178 aaKnown RBP15.94■□□□□ 0.14
DDX39A-215ENST00000590696 RNASE12Q5GAN4 147 aaKnown RBP15.94■□□□□ 0.14
DDX39A-215ENST00000590696 C11orf45Q8TAV5 145 aa15.94■□□□□ 0.14
DDX39A-215ENST00000590696 ZNF486Q96H40 463 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-215ENST00000590696 TP53RKQ96S44 253 aa15.94■□□□□ 0.14
DDX39A-215ENST00000590696 ZFAND3Q9H8U3 227 aa15.94■□□□□ 0.14
DDX39A-215ENST00000590696 KLK11Q9UBX7 282 aa15.94■□□□□ 0.14
DDX39A-215ENST00000590696 DEDDO75618 318 aa15.93■□□□□ 0.14
DDX39A-215ENST00000590696 IFNA17P01571 189 aa15.93■□□□□ 0.14
DDX39A-215ENST00000590696 P0C879 139 aa15.93■□□□□ 0.14
DDX39A-215ENST00000590696 AKR1C2P52895 323 aa15.93■□□□□ 0.14
DDX39A-215ENST00000590696 PIGPP57054 158 aa15.93■□□□□ 0.14
DDX39A-215ENST00000590696 DEFB131AP59861 70 aa15.93■□□□□ 0.14
DDX39A-215ENST00000590696 LEMD1Q68G75 181 aa15.93■□□□□ 0.14
DDX39A-215ENST00000590696 LGALS9CQ6DKI2 356 aa15.93■□□□□ 0.14
DDX39A-215ENST00000590696 C11orf68Q9H3H3 251 aaKnown RBP15.93■□□□□ 0.14
DDX39A-215ENST00000590696 FBXL17Q9UF56 701 aa15.93■□□□□ 0.14
DDX39A-215ENST00000590696 A0A1B0GU03 582 aa15.92■□□□□ 0.14
DDX39A-215ENST00000590696 FAM25AB3EWG3 89 aa15.92■□□□□ 0.14
DDX39A-215ENST00000590696 FAM25CB3EWG5 89 aa15.92■□□□□ 0.14
DDX39A-215ENST00000590696 FAM25GB3EWG6 89 aa15.92■□□□□ 0.14
DDX39A-215ENST00000590696 INS-IGF2F8WCM5 200 aa15.92■□□□□ 0.14
DDX39A-215ENST00000590696 RBMS2Q15434 407 aaKnown RBP15.92■□□□□ 0.14
DDX39A-215ENST00000590696 RNASE10Q5GAN6 216 aaKnown RBP15.92■□□□□ 0.14
DDX39A-215ENST00000590696 PVRIGQ6DKI7 326 aa15.92■□□□□ 0.14
DDX39A-215ENST00000590696 LHFPL1Q86WI0 220 aa15.92■□□□□ 0.14
DDX39A-215ENST00000590696 FAM24BQ8N5W8 94 aa15.92■□□□□ 0.14
DDX39A-215ENST00000590696 PDCD10Q9BUL8 212 aa15.92■□□□□ 0.14
DDX39A-215ENST00000590696 MFFQ9GZY8 342 aa15.92■□□□□ 0.14
DDX39A-215ENST00000590696 C3orf85A0A1B0GTC6 90 aa15.91■□□□□ 0.14
DDX39A-215ENST00000590696 DEFB4AO15263 64 aa15.91■□□□□ 0.14
DDX39A-215ENST00000590696 ATG12O94817 140 aa15.91■□□□□ 0.14
DDX39A-215ENST00000590696 CD3DP04234 171 aa15.91■□□□□ 0.14
DDX39A-215ENST00000590696 RNASE2P10153 161 aaKnown RBP15.91■□□□□ 0.14
DDX39A-215ENST00000590696 ETV6P41212 452 aa15.91■□□□□ 0.14
DDX39A-215ENST00000590696 RORCP51449 518 aa15.91■□□□□ 0.14
DDX39A-215ENST00000590696 SUB1P53999 127 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDX39A-215ENST00000590696 TMEM187Q14656 261 aa15.91■□□□□ 0.14
DDX39A-215ENST00000590696 RABAC1Q9UI14 185 aa15.91■□□□□ 0.14
DDX39A-215ENST00000590696 TRAV2A0A0B4J234 112 aa15.9■□□□□ 0.14
DDX39A-215ENST00000590696 CORTO00230 105 aa15.9■□□□□ 0.14
DDX39A-215ENST00000590696 IFNA4P05014 189 aa15.9■□□□□ 0.14
DDX39A-215ENST00000590696 NPPCP23582 126 aa15.9■□□□□ 0.14
DDX39A-215ENST00000590696 HOXA1P49639 335 aaPredicted RBP15.9■□□□□ 0.14
DDX39A-215ENST00000590696 MZT2AQ6P582 158 aa15.9■□□□□ 0.14
DDX39A-215ENST00000590696 ARRDC1Q8N5I2 433 aa15.9■□□□□ 0.14
DDX39A-215ENST00000590696 TMEM231Q9H6L2 316 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms