RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ATF4P18848 351 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-211ENST00000590098 NCS1P62166 190 aa13.26□□□□□ -0.29
PRKCSH-211ENST00000590098 KLK5Q9Y337 293 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-211ENST00000590098 HPGDSO60760 199 aa13.25□□□□□ -0.29
PRKCSH-211ENST00000590098 PGAM2P15259 253 aa13.25□□□□□ -0.29
PRKCSH-211ENST00000590098 ELK1P19419 428 aa13.25□□□□□ -0.29
PRKCSH-211ENST00000590098 SNCAP37840 140 aa13.25□□□□□ -0.29
PRKCSH-211ENST00000590098 VBP1P61758 197 aa13.25□□□□□ -0.29
PRKCSH-211ENST00000590098 PAFAH1B2P68402 229 aa13.25□□□□□ -0.29
PRKCSH-211ENST00000590098 GINS3Q9BRX5 216 aa13.25□□□□□ -0.29
PRKCSH-211ENST00000590098 FUNDC2Q9BWH2 189 aa13.25□□□□□ -0.29
PRKCSH-211ENST00000590098 MPTX1A8MV57 137 aa13.24□□□□□ -0.29
PRKCSH-211ENST00000590098 M0QYG6 137 aa13.24□□□□□ -0.29
PRKCSH-211ENST00000590098 NPBWR1P48145 328 aa13.24□□□□□ -0.29
PRKCSH-211ENST00000590098 RORCP51449 518 aa13.24□□□□□ -0.29
PRKCSH-211ENST00000590098 GBGT1Q8N5D6 347 aa13.24□□□□□ -0.29
PRKCSH-211ENST00000590098 DUSP18Q8NEJ0 188 aa13.24□□□□□ -0.29
PRKCSH-211ENST00000590098 ZNF414Q96IQ9 312 aa13.24□□□□□ -0.29
PRKCSH-211ENST00000590098 CSTL1Q9H114 145 aa13.24□□□□□ -0.29
PRKCSH-211ENST00000590098 IGHV3OR16-13A0A075B7E8 117 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 IGHV3-74A0A0B4J1X5 117 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 FAM25AB3EWG3 89 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 FAM25CB3EWG5 89 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 FAM25GB3EWG6 89 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 ATG12O94817 140 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 CD5P06127 495 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 RND3P61587 244 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 ZNF124Q15973 351 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 SPINK9Q5DT21 86 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 MZT2AQ6P582 158 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 ZNF486Q96H40 463 aaPredicted RBP13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 PDCD10Q9BUL8 212 aa13.23□□□□□ -0.29
PRKCSH-211ENST00000590098 IFNA17P01571 189 aa13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 PI3P19957 117 aa13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 AKR1C2P52895 323 aa13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 PIGPP57054 158 aa13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 IZUMO4Q1ZYL8 232 aa13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 RNASE12Q5GAN4 147 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 RNASE10Q5GAN6 216 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 FAM90A2PQ658T7 463 aa13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 TOMM20LQ6UXN7 152 aa13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 TCF24Q7RTU0 167 aa13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 SLC35G3Q8N808 338 aa13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 GATAD1Q8WUU5 269 aa13.22□□□□□ -0.29
PRKCSH-211ENST00000590098 DNASE2O00115 360 aaPredicted RBP13.21□□□□□ -0.29
PRKCSH-211ENST00000590098 ST8SIA3O43173 380 aa13.21□□□□□ -0.29
PRKCSH-211ENST00000590098 SUB1P53999 127 aaKnown RBP eCLIP13.21□□□□□ -0.29
PRKCSH-211ENST00000590098 ZNF600Q6ZNG1 722 aa13.21□□□□□ -0.29
PRKCSH-211ENST00000590098 AP3S1Q92572 193 aa13.21□□□□□ -0.29
PRKCSH-211ENST00000590098 RARRES2Q99969 163 aa13.21□□□□□ -0.29
PRKCSH-211ENST00000590098 IGKV1-5P01602 117 aa13.2□□□□□ -0.3
PRKCSH-211ENST00000590098 RPL11P62913 178 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-211ENST00000590098 TRIM16LQ309B1 348 aa13.2□□□□□ -0.3
PRKCSH-211ENST00000590098 LHFPL1Q86WI0 220 aa13.2□□□□□ -0.3
PRKCSH-211ENST00000590098 ARRDC1Q8N5I2 433 aa13.2□□□□□ -0.3
PRKCSH-211ENST00000590098 PHLDA1Q8WV24 401 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-211ENST00000590098 ST8SIA2Q92186 375 aa13.2□□□□□ -0.3
PRKCSH-211ENST00000590098 TP53RKQ96S44 253 aa13.2□□□□□ -0.3
PRKCSH-211ENST00000590098 KLK11Q9UBX7 282 aa13.2□□□□□ -0.3
PRKCSH-211ENST00000590098 PUS1Q9Y606 427 aaKnown RBP eCLIP13.2□□□□□ -0.3
PRKCSH-211ENST00000590098 A0A0B4J293 547 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 C3orf85A0A1B0GTC6 90 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 INS-IGF2F8WCM5 200 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 CORTO00230 105 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 CD3DP04234 171 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 TBPP20226 339 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 CCDC71LQ8N9Z2 235 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 ZFAND1Q8TCF1 268 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 MS4A6AQ9H2W1 248 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 TMEM231Q9H6L2 316 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 VSIRQ9H7M9 311 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 ENY2Q9NPA8 101 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 COPZ2Q9P299 210 aa13.19□□□□□ -0.3
PRKCSH-211ENST00000590098 FRAS1Q86XX4 4008 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 KMT2AQ03164 3969 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 IGHV3-66A0A0C4DH42 116 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 SCGB2A1O75556 95 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 DFFBO76075 338 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 TMEM50AO95807 157 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 APOHP02749 345 aaPredicted RBP13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 P0C879 139 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 HOXA1P49639 335 aaPredicted RBP13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 OR11H2Q8NH07 326 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 OR52I2Q8NH67 350 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 RNASE11Q8TAA1 199 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 RRNAD1Q96FB5 475 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 ZFAND3Q9H8U3 227 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 EXTL2Q9UBQ6 330 aa13.18□□□□□ -0.3
PRKCSH-211ENST00000590098 ZNF182P17025 639 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-211ENST00000590098 NPPCP23582 126 aa13.17□□□□□ -0.3
PRKCSH-211ENST00000590098 ETV6P41212 452 aa13.17□□□□□ -0.3
PRKCSH-211ENST00000590098 PPP5CP53041 499 aa13.17□□□□□ -0.3
PRKCSH-211ENST00000590098 SP6Q3SY56 376 aa13.17□□□□□ -0.3
PRKCSH-211ENST00000590098 LILRB2Q8N423 598 aa13.17□□□□□ -0.3
PRKCSH-211ENST00000590098 TERB2Q8NHR7 220 aa13.17□□□□□ -0.3
PRKCSH-211ENST00000590098 C15orf40Q8WUR7 153 aa13.17□□□□□ -0.3
PRKCSH-211ENST00000590098 MFFQ9GZY8 342 aa13.17□□□□□ -0.3
PRKCSH-211ENST00000590098 MTFP1Q9UDX5 166 aa13.17□□□□□ -0.3
PRKCSH-211ENST00000590098 TRAV2A0A0B4J234 112 aa13.16□□□□□ -0.3
PRKCSH-211ENST00000590098 A0A1W2PS18 150 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms