RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 CGB1A6NKQ9 187 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 COQ2Q96H96 371 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 DNM1P46Q6ZS02 220 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 FGF11Q92914 225 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 CRIM1Q9NZV1 1036 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 CCL8P80075 99 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 WFDC3Q8IUB2 231 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 GTSF1LQ9H1H1 148 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 WNT9BO14905 357 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 IGHV3-48P01763 117 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 HTN1P15515 57 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 RSPO4Q2I0M5 234 aaPredicted RBP12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 PEAR1Q5VY43 1037 aaPredicted RBP12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 C15orf61A6NNL5 157 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 FOXI3A8MTJ6 420 aaPredicted RBP12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 OTOFQ9HC10 1997 aa12.25□□□□□ -0.45
SMARCA4-214ENST00000589677 TRAV8-4A0A0B4J246 113 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 LOXL3P58215 753 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 C1orf185Q5T7R7 199 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 EBLN2Q6P2I7 272 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 OR13A1Q8NGR1 328 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 TMEM171Q8WVE6 324 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 GEMIN7Q9H840 131 aaKnown RBP12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 PFN1P07737 140 aaKnown RBP12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 TDGF1P13385 188 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 GATA2P23769 480 aaPredicted RBP12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 SPANXA1Q9NS26 97 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 TDRD15B5MCY1 1934 aaKnown RBP12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 TFF2Q03403 129 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 BRWD1Q9NSI6 2320 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 C16orf97H3BN30 126 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 QRFPP83859 136 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 MEIG1Q5JSS6 88 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 TMEM14EPQ6UXP3 125 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 DUSP15Q9H1R2 295 aaPredicted RBP12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 A0A0G2JMM0 328 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 A0A1W2PPB8 328 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 KIR3DP1A8MWS1 328 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 SYS1-DBNDD2H3BUS1 97 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 LCN12Q6JVE5 192 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 ZNF497Q6ZNH5 498 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 ZNF319Q9P2F9 582 aa12.24□□□□□ -0.45
SMARCA4-214ENST00000589677 TM4SF5O14894 197 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 KBTBD11-OT1A0A1B0GTJ5 212 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 GNG5P63218 68 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 TREML4Q6UXN2 200 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 A0A087X0K7 114 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 MUC21A0A0G2JKD1 596 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 MUC21A0A140T8X8 626 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 GUSBP1Q15486 140 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 MUC21Q5SSG8 566 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 BCL6BQ8N143 479 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 FADS6Q8N9I5 356 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 NPIPB11E5RHQ5 1161 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 PCOLCEQ15113 449 aa12.23□□□□□ -0.45
SMARCA4-214ENST00000589677 PIKFYVEQ9Y2I7 2098 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 hDV102S1A0JD36 115 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 UPK2O00526 184 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 FAM106CPP0CH98 169 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 SRSF1Q07955 248 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 SLC25A48Q6ZT89 311 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 RAMP3O60896 148 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 HGFACQ04756 655 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 FAM90A1Q86YD7 464 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 C1orf210Q8IVY1 113 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 SIGLEC12Q96PQ1 595 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 RFNGQ9Y644 331 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 PRR33A8MZF0 331 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 TGFAP01135 160 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 COX6A1P12074 109 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 KIR3DS1Q14943 382 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 GGTLC1Q9BX51 225 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 YPEL1O60688 119 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 YPEL2Q96QA6 119 aa12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 CHCHD2Q9Y6H1 151 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-214ENST00000589677 PILRBQ9UKJ0 227 aa12.21□□□□□ -0.45
SMARCA4-214ENST00000589677 LTBP1Q14766 1721 aa12.21□□□□□ -0.45
SMARCA4-214ENST00000589677 WBP1Q96G27 269 aa12.21□□□□□ -0.46
SMARCA4-214ENST00000589677 MRAP2Q96G30 205 aa12.21□□□□□ -0.46
SMARCA4-214ENST00000589677 TCRBV4S1A1TA0A5B7 111 aa12.21□□□□□ -0.46
SMARCA4-214ENST00000589677 MMP23AO75900 390 aa12.21□□□□□ -0.46
SMARCA4-214ENST00000589677 CD33P20138 364 aa12.21□□□□□ -0.46
SMARCA4-214ENST00000589677 ASIPP42127 132 aa12.21□□□□□ -0.46
SMARCA4-214ENST00000589677 DMRTA2Q96SC8 542 aa12.21□□□□□ -0.46
SMARCA4-214ENST00000589677 GP6Q9HCN6 339 aa12.21□□□□□ -0.46
SMARCA4-214ENST00000589677 ZNF638Q14966 1978 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 SCN10AQ9Y5Y9 1956 aa12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 SCN8AQ9UQD0 1980 aa12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 AHRRA9YTQ3 701 aa12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 NPPCP23582 126 aa12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 CD69Q07108 199 aa12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 ZNF56Q15929 161 aa12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 RPRMLQ8N4K4 120 aa12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 ZNRF1Q8ND25 227 aa12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 DNASE2BQ8WZ79 361 aa12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 NAA38Q9BRA0 125 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-214ENST00000589677 TMEM95Q3KNT9 176 aa12.19□□□□□ -0.46
SMARCA4-214ENST00000589677 WDR90Q96KV7 1748 aa12.19□□□□□ -0.46
SMARCA4-214ENST00000589677 IGLC2P0DOY2 106 aa12.19□□□□□ -0.46
SMARCA4-214ENST00000589677 IGLC3P0DOY3 106 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms