RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 C1QAP02745 245 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 OR5G3P0C626 314 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 FAM228BP0C875 321 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 GLI2P10070 1586 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 HIST1H1EP10412 219 aaKnown RBP0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 NKX2-5P52952 324 aaPredicted RBP0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 RAB14P61106 215 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 CAV1Q03135 178 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 FABP9Q0Z7S8 132 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 ATMQ13315 3056 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 OR2F1Q13607 317 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 HIST3H3Q16695 136 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 IMPG1Q17R60 797 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 ARHGAP11BQ3KRB8 267 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 LPCAT4Q643R3 524 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 PTRHD1Q6GMV3 140 aaKnown RBP0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 TTC37Q6PGP7 1564 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 DNMBPQ6XZF7 1577 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 RPP25LQ8N5L8 163 aaKnown RBP0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 TMEM86BQ8N661 226 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 OR1M1Q8NGA1 313 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 ROPN1LQ96C74 230 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 ODF3Q96PU9 254 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 SPENQ96T58 3664 aaKnown RBP0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 PARD6GQ9BYG4 376 aaPredicted RBP0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 OR8D2Q9GZM6 311 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 CHST6Q9GZX3 395 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 CELSR2Q9HCU4 2923 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 CLTCQ00610 1675 aaKnown RBP0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 ZC3H13Q5T200 1668 aaKnown RBP0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 TOP2AP11388 1531 aaKnown RBP0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 CPS1P31327 1500 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 MAP3K1Q13233 1512 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 ZFYVE16Q7Z3T8 1539 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 KDM5DQ9BY66 1539 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 AKAP9Q99996 3911 aa0.68□□□□□ -2.3
HMGN1P30-201ENST00000589286 SHROOM2Q13796 1616 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 MYO3AQ8NEV4 1616 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 A2MP01023 1474 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 MAGI1Q96QZ7 1491 aaPredicted RBP0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 WDR7Q9Y4E6 1490 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 NBPF19A0A087WUL8 3843 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 CPAMD8Q8IZJ3 1885 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 POLR1AO95602 1720 aaPredicted RBP0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 PRDM2Q13029 1718 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 BOD1L1Q8NFC6 3051 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 TRAPPC8Q9Y2L5 1435 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 UBR5O95071 2799 aaPredicted RBP0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 SIPA1L1O43166 1804 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 TEP1Q99973 2627 aaKnown RBP0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 A0A0D9SEW6 157 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 A0A1B0GV50 99 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 OR51F1A6NGY5 319 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 I3L521 148 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 CALB1P05937 261 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 SRP19P09132 144 aaKnown RBP0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 PRB4P10163 310 aaPredicted RBP0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 FGF6P10767 208 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 CSN1S1P47710 185 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 RAB13P51153 203 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 TCL1AP56279 114 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 OR4D2P58180 307 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 PMAIP1Q13794 54 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 SYPL2Q5VXT5 272 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 C9orf163Q8N9P6 203 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 ANKRD7Q92527 254 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 SLC35B4Q969S0 331 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 CNBD2Q96M20 576 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 MRPS26Q9BYN8 205 aaKnown RBP0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 GUCA1BQ9UMX6 200 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 ZNF142P52746 1687 aaPredicted RBP0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 CACNA1BQ00975 2339 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 PTPRSQ13332 1948 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 ARHGEF12Q9NZN5 1544 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 AKAP13Q12802 2813 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 HECW1Q76N89 1606 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 NAV1Q8NEY1 1877 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 TGP01266 2768 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 MED12LQ86YW9 2145 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 DMXL2Q8TDJ6 3036 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 CFTRP13569 1480 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 CAMSAP2Q08AD1 1489 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 ZCCHC6Q5VYS8 1495 aaKnown RBP0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 RALGAPBQ86X10 1494 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 CDK12Q9NYV4 1490 aaPredicted RBP0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 NUP188Q5SRE5 1749 aa0.67□□□□□ -2.3
HMGN1P30-201ENST00000589286 GLI3P10071 1580 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 ADAMTS12P58397 1594 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 NWD1Q149M9 1564 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 CEP170BQ9Y4F5 1589 aaPredicted RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 ITPR3Q14573 2671 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 IQGAP1P46940 1657 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 FAM135BQ49AJ0 1406 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 FMN1Q68DA7 1419 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 UACAQ9BZF9 1416 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 LAMB4A4D0S4 1761 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 ABCC1P33527 1531 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 CDK13Q14004 1512 aaKnown RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 KCPQ6ZWJ8 1503 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 DLC1Q96QB1 1528 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms