RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 GNG7O60262 68 aa14.2□□□□□ -0.14
TRAF4-216ENST00000586813 DEDDO75618 318 aa14.2□□□□□ -0.14
TRAF4-216ENST00000586813 EIF4EP06730 217 aaKnown RBP14.2□□□□□ -0.14
TRAF4-216ENST00000586813 TSPAN5P62079 268 aa14.2□□□□□ -0.14
TRAF4-216ENST00000586813 LSM3P62310 102 aaKnown RBP14.2□□□□□ -0.14
TRAF4-216ENST00000586813 LGALS9CQ6DKI2 356 aa14.2□□□□□ -0.14
TRAF4-216ENST00000586813 GINS3Q9BRX5 216 aa14.2□□□□□ -0.14
TRAF4-216ENST00000586813 C11orf68Q9H3H3 251 aaKnown RBP14.2□□□□□ -0.14
TRAF4-216ENST00000586813 PAFAH1B2P68402 229 aa14.19□□□□□ -0.14
TRAF4-216ENST00000586813 TCF24Q7RTU0 167 aa14.19□□□□□ -0.14
TRAF4-216ENST00000586813 OR11H2Q8NH07 326 aa14.19□□□□□ -0.14
TRAF4-216ENST00000586813 YIPF6Q96EC8 236 aa14.19□□□□□ -0.14
TRAF4-216ENST00000586813 MFFQ9GZY8 342 aa14.19□□□□□ -0.14
TRAF4-216ENST00000586813 CD5P06127 495 aa14.18□□□□□ -0.14
TRAF4-216ENST00000586813 UCP3P55916 312 aa14.18□□□□□ -0.14
TRAF4-216ENST00000586813 NANOS2P60321 138 aaKnown RBP14.18□□□□□ -0.14
TRAF4-216ENST00000586813 HSPE1P61604 102 aaKnown RBP14.18□□□□□ -0.14
TRAF4-216ENST00000586813 ERHP84090 104 aaKnown RBP14.18□□□□□ -0.14
TRAF4-216ENST00000586813 TOMM20LQ6UXN7 152 aa14.18□□□□□ -0.14
TRAF4-216ENST00000586813 C11orf45Q8TAV5 145 aa14.18□□□□□ -0.14
TRAF4-216ENST00000586813 ST8SIA2Q92186 375 aa14.18□□□□□ -0.14
TRAF4-216ENST00000586813 SCPEP1Q9HB40 452 aa14.18□□□□□ -0.14
TRAF4-216ENST00000586813 CA1P00915 261 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-216ENST00000586813 RCVRNP35243 200 aa14.17□□□□□ -0.14
TRAF4-216ENST00000586813 RBMS2Q15434 407 aaKnown RBP14.17□□□□□ -0.14
TRAF4-216ENST00000586813 SPINK9Q5DT21 86 aa14.17□□□□□ -0.14
TRAF4-216ENST00000586813 VSIRQ9H7M9 311 aa14.17□□□□□ -0.14
TRAF4-216ENST00000586813 ZFAND3Q9H8U3 227 aa14.17□□□□□ -0.14
TRAF4-216ENST00000586813 FBXL17Q9UF56 701 aa14.17□□□□□ -0.14
TRAF4-216ENST00000586813 VPS13DQ5THJ4 4388 aa14.16□□□□□ -0.14
TRAF4-216ENST00000586813 ST8SIA3O43173 380 aa14.16□□□□□ -0.14
TRAF4-216ENST00000586813 APOHP02749 345 aaPredicted RBP14.16□□□□□ -0.14
TRAF4-216ENST00000586813 NPBWR1P48145 328 aa14.16□□□□□ -0.14
TRAF4-216ENST00000586813 IZUMO4Q1ZYL8 232 aa14.16□□□□□ -0.14
TRAF4-216ENST00000586813 SNX29P2Q8IUI4 249 aa14.16□□□□□ -0.14
TRAF4-216ENST00000586813 LILRB2Q8N423 598 aa14.16□□□□□ -0.14
TRAF4-216ENST00000586813 MS4A6AQ9H2W1 248 aa14.16□□□□□ -0.14
TRAF4-216ENST00000586813 PUS1Q9Y606 427 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRAF4-216ENST00000586813 IGHV3-66A0A0C4DH42 116 aa14.15□□□□□ -0.14
TRAF4-216ENST00000586813 SMIM31A0A1B0GVY4 71 aa14.15□□□□□ -0.14
TRAF4-216ENST00000586813 DFFBO76075 338 aa14.15□□□□□ -0.14
TRAF4-216ENST00000586813 APOA1P02647 267 aa14.15□□□□□ -0.14
TRAF4-216ENST00000586813 LEMD1Q68G75 181 aa14.15□□□□□ -0.14
TRAF4-216ENST00000586813 ZNF600Q6ZNG1 722 aa14.15□□□□□ -0.14
TRAF4-216ENST00000586813 DUSP18Q8NEJ0 188 aa14.15□□□□□ -0.14
TRAF4-216ENST00000586813 COMMD3Q9UBI1 195 aa14.15□□□□□ -0.14
TRAF4-216ENST00000586813 TRAV2A0A0B4J234 112 aa14.14□□□□□ -0.15
TRAF4-216ENST00000586813 DNASE2O00115 360 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-216ENST00000586813 DEFB4AO15263 64 aa14.14□□□□□ -0.15
TRAF4-216ENST00000586813 IGKV1-5P01602 117 aa14.14□□□□□ -0.15
TRAF4-216ENST00000586813 IFNA4P05014 189 aa14.14□□□□□ -0.15
TRAF4-216ENST00000586813 DEFB131AP59861 70 aa14.14□□□□□ -0.15
TRAF4-216ENST00000586813 TMEM187Q14656 261 aa14.14□□□□□ -0.15
TRAF4-216ENST00000586813 FAM24BQ8N5W8 94 aa14.14□□□□□ -0.15
TRAF4-216ENST00000586813 SLC35G3Q8N808 338 aa14.14□□□□□ -0.15
TRAF4-216ENST00000586813 VCX3AQ9NNX9 186 aa14.14□□□□□ -0.15
TRAF4-216ENST00000586813 HECTD4Q9Y4D8 3996 aa14.14□□□□□ -0.15
TRAF4-216ENST00000586813 A0A1B0GU03 582 aa14.13□□□□□ -0.15
TRAF4-216ENST00000586813 INS-IGF2F8WCM5 200 aa14.13□□□□□ -0.15
TRAF4-216ENST00000586813 M0QYG6 137 aa14.13□□□□□ -0.15
TRAF4-216ENST00000586813 P0C879 139 aa14.13□□□□□ -0.15
TRAF4-216ENST00000586813 SNCAP37840 140 aa14.13□□□□□ -0.15
TRAF4-216ENST00000586813 RND3P61587 244 aa14.13□□□□□ -0.15
TRAF4-216ENST00000586813 RPL11P62913 178 aaKnown RBP14.13□□□□□ -0.15
TRAF4-216ENST00000586813 TMEM231Q9H6L2 316 aa14.13□□□□□ -0.15
TRAF4-216ENST00000586813 DNAH6Q9C0G6 4158 aa14.13□□□□□ -0.15
TRAF4-216ENST00000586813 AGRNO00468 2067 aa14.12□□□□□ -0.15
TRAF4-216ENST00000586813 CORTO00230 105 aa14.12□□□□□ -0.15
TRAF4-216ENST00000586813 PI3P19957 117 aa14.12□□□□□ -0.15
TRAF4-216ENST00000586813 AKR1C2P52895 323 aa14.12□□□□□ -0.15
TRAF4-216ENST00000586813 NCS1P62166 190 aa14.12□□□□□ -0.15
TRAF4-216ENST00000586813 PVRIGQ6DKI7 326 aa14.12□□□□□ -0.15
TRAF4-216ENST00000586813 C2CD4CQ8TF44 421 aa14.12□□□□□ -0.15
TRAF4-216ENST00000586813 ZNF486Q96H40 463 aaPredicted RBP14.12□□□□□ -0.15
TRAF4-216ENST00000586813 TP53RKQ96S44 253 aa14.12□□□□□ -0.15
TRAF4-216ENST00000586813 A0A087WXM4 84 aa14.11□□□□□ -0.15
TRAF4-216ENST00000586813 A0A0B4J293 547 aa14.11□□□□□ -0.15
TRAF4-216ENST00000586813 TMEM50AO95807 157 aa14.11□□□□□ -0.15
TRAF4-216ENST00000586813 PGAM2P15259 253 aa14.11□□□□□ -0.15
TRAF4-216ENST00000586813 ELK1P19419 428 aa14.11□□□□□ -0.15
TRAF4-216ENST00000586813 PIGPP57054 158 aa14.11□□□□□ -0.15
TRAF4-216ENST00000586813 STHQ8IWL8 128 aa14.11□□□□□ -0.15
TRAF4-216ENST00000586813 KRTAP17-1Q9BYP8 105 aa14.11□□□□□ -0.15
TRAF4-216ENST00000586813 RABAC1Q9UI14 185 aa14.11□□□□□ -0.15
TRAF4-216ENST00000586813 HPGDSO60760 199 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 IFNA17P01571 189 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 RNASE2P10153 161 aaKnown RBP14.1□□□□□ -0.15
TRAF4-216ENST00000586813 TCTAP57738 103 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 PRR20EP86478 221 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 PRR20CP86479 221 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 PRR20DP86480 221 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 PRR20BP86481 221 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 PRR20AP86496 221 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 LHFPL1Q86WI0 220 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 Q8NAQ8 132 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 PDCD10Q9BUL8 212 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 MRPL36Q9P0J6 103 aaKnown RBP14.1□□□□□ -0.15
TRAF4-216ENST00000586813 HERC2O95714 4834 aa14.1□□□□□ -0.15
TRAF4-216ENST00000586813 NPPCP23582 126 aa14.09□□□□□ -0.15
TRAF4-216ENST00000586813 HOXA1P49639 335 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms