RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 SRSF12Q8WXF0 261 aaKnown RBP8.09□□□□□ -1.11
APOC1-201ENST00000586638 FBXO7Q9Y3I1 522 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 NCBP2LA6PVI3 153 aaKnown RBP8.08□□□□□ -1.12
APOC1-201ENST00000586638 INS-IGF2F8WCM5 200 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 BRS3P32247 399 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 SNCAP37840 140 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 NDPQ00604 133 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 ZNF616Q08AN1 781 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 AANATQ16613 207 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 AKR1C8PQ5T2L2 129 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 BTNL8Q6UX41 500 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 IL17RELQ6ZVW7 336 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 P2RX4Q99571 388 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 PSMG3Q9BT73 122 aaPredicted RBP8.08□□□□□ -1.12
APOC1-201ENST00000586638 FAM103A1Q9BTL3 118 aaKnown RBP8.08□□□□□ -1.12
APOC1-201ENST00000586638 HRH4Q9H3N8 390 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 VSIRQ9H7M9 311 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 WDR83OSQ9Y284 106 aa8.08□□□□□ -1.12
APOC1-201ENST00000586638 A0A1B0GV50 99 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 MDFIC2A0A1B0GVS7 189 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 MFSD2BA6NFX1 497 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 CNIH1O95406 144 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 TGFAP01135 160 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 HNF1AP20823 631 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 GATA3P23771 443 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 BLOC1S1P78537 153 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 AKR1C1Q04828 323 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 ACSM6Q6P461 480 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 TREML4Q6UXN2 200 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 SLC16A13Q7RTY0 426 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 TMEM219Q86XT9 240 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 MRPL41Q8IXM3 137 aaKnown RBP8.07□□□□□ -1.12
APOC1-201ENST00000586638 Q8N9W7 124 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 SSMEM1Q8WWF3 244 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 SAT2Q96F10 170 aaPredicted RBP8.07□□□□□ -1.12
APOC1-201ENST00000586638 MGST2Q99735 147 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 NPCDR1Q9BY65 106 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 PARP11Q9NR21 331 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 MED9Q9NWA0 146 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 TIMM9Q9Y5J7 89 aa8.07□□□□□ -1.12
APOC1-201ENST00000586638 TGP01266 2768 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 ANKRD34BA5PLL1 514 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 SH2D7A6NKC9 451 aaPredicted RBP8.06□□□□□ -1.12
APOC1-201ENST00000586638 J3QLI3 93 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 WIPF1O43516 503 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 FAM106CPP0CH98 169 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 MDKP21741 143 aaPredicted RBP8.06□□□□□ -1.12
APOC1-201ENST00000586638 RAB5CP51148 216 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 MFAP2P55001 183 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 RAB2AP61019 212 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 CD69Q07108 199 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 FXYD3Q14802 87 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 FFAR4Q5NUL3 377 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 ARPC1AQ92747 370 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 MISP3Q96FF7 219 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 GGACTQ9BVM4 153 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 GGTLC1Q9BX51 225 aa8.06□□□□□ -1.12
APOC1-201ENST00000586638 NOTCH1P46531 2555 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 UMAD1C9J7I0 102 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 C17orf112F2Z3M2 114 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 TRIM77I1YAP6 450 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 I3L521 148 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 EIF3GO75821 320 aaKnown RBP eCLIP8.05□□□□□ -1.12
APOC1-201ENST00000586638 IGHV3-48P01763 117 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 OPRK1P41145 380 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 CX3CL1P78423 397 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 LY6EQ16553 131 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 MLANAQ16655 118 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 TMEM41BQ5BJD5 291 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 TOR2AQ5JU69 321 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 MIC13Q5XKP0 118 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 SSX7Q7RTT5 188 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 HSD17B13Q7Z5P4 300 aaPredicted RBP8.05□□□□□ -1.12
APOC1-201ENST00000586638 ZNF114Q8NC26 417 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 SLC35E1Q96K37 410 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 SSX3Q99909 188 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 RASL11BQ9BPW5 248 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 HSPB9Q9BQS6 159 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 SLC25A33Q9BSK2 321 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 FNDC4Q9H6D8 234 aaPredicted RBP8.05□□□□□ -1.12
APOC1-201ENST00000586638 SLC25A22Q9H936 323 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 FAM96BQ9Y3D0 163 aa8.05□□□□□ -1.12
APOC1-201ENST00000586638 F11RQ9Y624 299 aaKnown RBP8.05□□□□□ -1.12
APOC1-201ENST00000586638 IGHV3-21A0A0B4J1V1 117 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 IGHV7-81A0A0B4J1V7 117 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 FNDC10F2Z333 226 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 H3BUX3 64 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 AGPAT2O15120 278 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 FSHBP01225 129 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 HLA-DRB1P01911 266 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 FBP1P09467 338 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 DEFA4P12838 97 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 S100A1P23297 94 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 SUB1P53999 127 aaKnown RBP eCLIP8.04□□□□□ -1.12
APOC1-201ENST00000586638 ATP5IP56385 69 aaPredicted RBP8.04□□□□□ -1.12
APOC1-201ENST00000586638 GAMTQ14353 236 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 ZNF726P1Q15940 193 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 ASPHD1Q5U4P2 390 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 FAM122CQ6P4D5 195 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 DPPA3Q6W0C5 159 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms