RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 PRSS3P35030 304 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 RPS19P39019 145 aaKnown RBP14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 TAS2R46P59540 309 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 TSPAN5P62079 268 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 PAFAH1B2P68402 229 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 TOMM20LQ6UXN7 152 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 H2BFWTQ7Z2G1 175 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 TBC1D26Q86UD7 250 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 SAMD12Q8N8I0 201 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 ST8SIA2Q92186 375 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 Q9H521 79 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 ANAPC10Q9UM13 185 aa14.72□□□□□ -0.05
CLPTM1-204ENST00000585961 ST8SIA3O43173 380 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 GNG7O60262 68 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 DFFBO76075 338 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 IGKV1-39P01597 117 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 IGKV1D-39P04432 117 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 DEFB131AP59861 70 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 UBE2NLQ5JXB2 153 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 CADM3Q8N126 398 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 SEC22AQ96IW7 307 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 TSC22D3Q99576 134 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 TXN2Q99757 166 aa14.71□□□□□ -0.05
CLPTM1-204ENST00000585961 VPS13DQ5THJ4 4388 aa14.7□□□□□ -0.06
CLPTM1-204ENST00000585961 ATP6V1G2O95670 118 aa14.7□□□□□ -0.06
CLPTM1-204ENST00000585961 ERHP84090 104 aaKnown RBP14.7□□□□□ -0.06
CLPTM1-204ENST00000585961 FAM24BQ8N5W8 94 aa14.7□□□□□ -0.06
CLPTM1-204ENST00000585961 MS4A6AQ9H2W1 248 aa14.7□□□□□ -0.06
CLPTM1-204ENST00000585961 IGLL5B9A064 214 aa14.69□□□□□ -0.06
CLPTM1-204ENST00000585961 EIF4EP06730 217 aaKnown RBP14.69□□□□□ -0.06
CLPTM1-204ENST00000585961 HSPE1P61604 102 aaKnown RBP14.69□□□□□ -0.06
CLPTM1-204ENST00000585961 TMEM187Q14656 261 aa14.69□□□□□ -0.06
CLPTM1-204ENST00000585961 C2CD4CQ8TF44 421 aa14.69□□□□□ -0.06
CLPTM1-204ENST00000585961 MRGPRFQ96AM1 343 aa14.69□□□□□ -0.06
CLPTM1-204ENST00000585961 MFFQ9GZY8 342 aa14.69□□□□□ -0.06
CLPTM1-204ENST00000585961 S100GP29377 79 aa14.68□□□□□ -0.06
CLPTM1-204ENST00000585961 PRCDQ00LT1 54 aa14.68□□□□□ -0.06
CLPTM1-204ENST00000585961 LPCAT3Q6P1A2 487 aa14.68□□□□□ -0.06
CLPTM1-204ENST00000585961 PUS1Q9Y606 427 aaKnown RBP eCLIP14.68□□□□□ -0.06
CLPTM1-204ENST00000585961 MLANAQ16655 118 aa14.67□□□□□ -0.06
CLPTM1-204ENST00000585961 SNX29P2Q8IUI4 249 aa14.67□□□□□ -0.06
CLPTM1-204ENST00000585961 DUSP18Q8NEJ0 188 aa14.67□□□□□ -0.06
CLPTM1-204ENST00000585961 RABAC1Q9UI14 185 aa14.67□□□□□ -0.06
CLPTM1-204ENST00000585961 TMEM50AO95807 157 aa14.66□□□□□ -0.06
CLPTM1-204ENST00000585961 CROCCP3Q8IVE0 287 aa14.66□□□□□ -0.06
CLPTM1-204ENST00000585961 STHQ8IWL8 128 aa14.66□□□□□ -0.06
CLPTM1-204ENST00000585961 GINS3Q9BRX5 216 aa14.66□□□□□ -0.06
CLPTM1-204ENST00000585961 C11orf68Q9H3H3 251 aaKnown RBP14.66□□□□□ -0.06
CLPTM1-204ENST00000585961 VSIRQ9H7M9 311 aa14.66□□□□□ -0.06
CLPTM1-204ENST00000585961 COMMD3Q9UBI1 195 aa14.66□□□□□ -0.06
CLPTM1-204ENST00000585961 A0A1B0GU03 582 aa14.65□□□□□ -0.06
CLPTM1-204ENST00000585961 TMEM127O75204 238 aa14.65□□□□□ -0.06
CLPTM1-204ENST00000585961 PI3P19957 117 aa14.65□□□□□ -0.06
CLPTM1-204ENST00000585961 NPBWR1P48145 328 aa14.65□□□□□ -0.06
CLPTM1-204ENST00000585961 GPX8Q8TED1 209 aa14.65□□□□□ -0.06
CLPTM1-204ENST00000585961 KNCNA6PVL3 124 aa14.64□□□□□ -0.07
CLPTM1-204ENST00000585961 M0QYG6 137 aa14.64□□□□□ -0.07
CLPTM1-204ENST00000585961 RBMY1A1P0DJD3 496 aaKnown RBP14.64□□□□□ -0.07
CLPTM1-204ENST00000585961 RBMY1CP0DJD4 496 aa14.64□□□□□ -0.07
CLPTM1-204ENST00000585961 SNCAP37840 140 aa14.64□□□□□ -0.07
CLPTM1-204ENST00000585961 ETV6P41212 452 aa14.64□□□□□ -0.07
CLPTM1-204ENST00000585961 RBMY1FQ15415 496 aaKnown RBP14.64□□□□□ -0.07
CLPTM1-204ENST00000585961 ZNF600Q6ZNG1 722 aa14.64□□□□□ -0.07
CLPTM1-204ENST00000585961 ZNF114Q8NC26 417 aa14.64□□□□□ -0.07
CLPTM1-204ENST00000585961 APLNQ9ULZ1 77 aa14.64□□□□□ -0.07
CLPTM1-204ENST00000585961 A0A0B4J293 547 aa14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 SMIM31A0A1B0GVY4 71 aa14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 IFNA17P01571 189 aa14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 GIG44P09565 113 aaPredicted RBP14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 PGAM2P15259 253 aa14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 NPPCP23582 126 aa14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 PPP5CP53041 499 aa14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 RNASE12Q5GAN4 147 aaKnown RBP14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 YIPF6Q96EC8 236 aa14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 ZFAND3Q9H8U3 227 aa14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 FAM212BQ9NTI7 297 aaPredicted RBP14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 MRPL36Q9P0J6 103 aaKnown RBP14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 HERC2O95714 4834 aa14.63□□□□□ -0.07
CLPTM1-204ENST00000585961 IGKV1-5P01602 117 aa14.62□□□□□ -0.07
CLPTM1-204ENST00000585961 CD5P06127 495 aa14.62□□□□□ -0.07
CLPTM1-204ENST00000585961 UCP3P55916 312 aa14.62□□□□□ -0.07
CLPTM1-204ENST00000585961 STXBP6Q8NFX7 210 aa14.62□□□□□ -0.07
CLPTM1-204ENST00000585961 CLEC5AQ9NY25 188 aa14.62□□□□□ -0.07
CLPTM1-204ENST00000585961 IGHV4-28A0A0C4DH34 117 aa14.61□□□□□ -0.07
CLPTM1-204ENST00000585961 SP6Q3SY56 376 aa14.61□□□□□ -0.07
CLPTM1-204ENST00000585961 SLC35G3Q8N808 338 aa14.61□□□□□ -0.07
CLPTM1-204ENST00000585961 Q8NAQ8 132 aa14.61□□□□□ -0.07
CLPTM1-204ENST00000585961 TMEM230Q96A57 120 aa14.61□□□□□ -0.07
CLPTM1-204ENST00000585961 ZNF688P0C7X2 276 aa14.6□□□□□ -0.07
CLPTM1-204ENST00000585961 HLA-DMBP28068 263 aa14.6□□□□□ -0.07
CLPTM1-204ENST00000585961 KCTD21Q4G0X4 260 aa14.6□□□□□ -0.07
CLPTM1-204ENST00000585961 TP53RKQ96S44 253 aa14.6□□□□□ -0.07
CLPTM1-204ENST00000585961 HPGDSO60760 199 aa14.59□□□□□ -0.07
CLPTM1-204ENST00000585961 RNASE2P10153 161 aaKnown RBP14.59□□□□□ -0.07
CLPTM1-204ENST00000585961 ELK1P19419 428 aa14.59□□□□□ -0.07
CLPTM1-204ENST00000585961 FNDC4Q9H6D8 234 aaPredicted RBP14.59□□□□□ -0.07
CLPTM1-204ENST00000585961 TMEM231Q9H6L2 316 aa14.59□□□□□ -0.07
CLPTM1-204ENST00000585961 AGRNO00468 2067 aa14.59□□□□□ -0.07
CLPTM1-204ENST00000585961 HECTD4Q9Y4D8 3996 aa14.58□□□□□ -0.07
CLPTM1-204ENST00000585961 ELOA3CA0A087WX78 387 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms