RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 TGOLN2O43493 480 aa12.35□□□□□ -0.43
ERBB2-222ENST00000584908 NDUFB6O95139 128 aa12.35□□□□□ -0.43
ERBB2-222ENST00000584908 SPNP16150 400 aa12.35□□□□□ -0.43
ERBB2-222ENST00000584908 BTCP35070 178 aa12.35□□□□□ -0.43
ERBB2-222ENST00000584908 CCR6P51684 374 aa12.35□□□□□ -0.43
ERBB2-222ENST00000584908 FAM106AQ4KMX7 169 aa12.35□□□□□ -0.43
ERBB2-222ENST00000584908 SPINK9Q5DT21 86 aa12.35□□□□□ -0.43
ERBB2-222ENST00000584908 LYZL2Q7Z4W2 148 aa12.35□□□□□ -0.43
ERBB2-222ENST00000584908 CENPSQ8N2Z9 138 aa12.35□□□□□ -0.43
ERBB2-222ENST00000584908 ZNF436Q9C0F3 470 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-222ENST00000584908 PRR13Q9NZ81 148 aa12.35□□□□□ -0.43
ERBB2-222ENST00000584908 CENPXA8MT69 81 aa12.34□□□□□ -0.43
ERBB2-222ENST00000584908 SULT1A3P0DMM9 295 aa12.34□□□□□ -0.43
ERBB2-222ENST00000584908 SULT1A4P0DMN0 295 aa12.34□□□□□ -0.43
ERBB2-222ENST00000584908 RNASE2P10153 161 aaKnown RBP12.34□□□□□ -0.43
ERBB2-222ENST00000584908 GP9P14770 177 aa12.34□□□□□ -0.43
ERBB2-222ENST00000584908 SNCAP37840 140 aa12.34□□□□□ -0.43
ERBB2-222ENST00000584908 PLET1Q6UQ28 207 aa12.34□□□□□ -0.43
ERBB2-222ENST00000584908 OR2K2Q8NGT1 345 aa12.34□□□□□ -0.43
ERBB2-222ENST00000584908 TXN2Q99757 166 aa12.34□□□□□ -0.43
ERBB2-222ENST00000584908 GAR1Q9NY12 217 aaKnown RBP12.34□□□□□ -0.43
ERBB2-222ENST00000584908 OR2T8A6NH00 312 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 C2orf70A6NJV1 201 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 SFT2D2O95562 160 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 ADMP35318 185 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 HOXA1P49639 335 aaPredicted RBP12.33□□□□□ -0.44
ERBB2-222ENST00000584908 SUB1P53999 127 aaKnown RBP eCLIP12.33□□□□□ -0.44
ERBB2-222ENST00000584908 PPP1R1AQ13522 171 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 ANKRD55Q3KP44 614 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 DEFB121Q5J5C9 76 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 HAPLN4Q86UW8 402 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 MISP3Q96FF7 219 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 CCDC32Q9BV29 185 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 ENY2Q9NPA8 101 aa12.33□□□□□ -0.44
ERBB2-222ENST00000584908 IGHV3-21A0A0B4J1V1 117 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 A0A1B0GU03 582 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 TMEM213A2RRL7 107 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 CORTO00230 105 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 PLA2G10O15496 165 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 MT-CO2P00403 227 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 CTSGP08311 255 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 FOLR2P14207 255 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 VAMP1P23763 118 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 ELLP55199 621 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-222ENST00000584908 SMCO1Q147U7 214 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 S100ZQ8WXG8 99 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 CHRDL1Q9BU40 450 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 BATF3Q9NR55 127 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 PTTG2Q9NZH5 202 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 HSPB7Q9UBY9 170 aa12.32□□□□□ -0.44
ERBB2-222ENST00000584908 NDUFA4O00483 81 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 LY86O95711 162 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 C8orf88P0DMB2 117 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 SLC25A6P12236 298 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 CBLN1P23435 193 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 HTR2BP41595 481 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 MFAP4P55083 255 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 TNFRSF9Q07011 255 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 UNQ9165/PRO28630Q6UXU0 137 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 TMEM190Q8WZ59 177 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 ZNF414Q96IQ9 312 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 B9D2Q9BPU9 175 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 PALMDQ9NP74 551 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 ZC4H2Q9NQZ6 224 aa12.31□□□□□ -0.44
ERBB2-222ENST00000584908 TECRQ9NZ01 308 aaKnown RBP12.31□□□□□ -0.44
ERBB2-222ENST00000584908 LINC00854A0A1B0GVQ3 168 aa12.3□□□□□ -0.44
ERBB2-222ENST00000584908 PITX3O75364 302 aa12.3□□□□□ -0.44
ERBB2-222ENST00000584908 DEFB114Q30KQ6 69 aa12.3□□□□□ -0.44
ERBB2-222ENST00000584908 C2orf83Q53S99 150 aa12.3□□□□□ -0.44
ERBB2-222ENST00000584908 Q56UQ5 140 aa12.3□□□□□ -0.44
ERBB2-222ENST00000584908 MARC2Q969Z3 335 aa12.3□□□□□ -0.44
ERBB2-222ENST00000584908 FLVCR2Q9UPI3 526 aa12.3□□□□□ -0.44
ERBB2-222ENST00000584908 UFC1Q9Y3C8 167 aa12.3□□□□□ -0.44
ERBB2-222ENST00000584908 TMED3Q9Y3Q3 217 aa12.3□□□□□ -0.44
ERBB2-222ENST00000584908 DNAH9Q9NYC9 4486 aa12.3□□□□□ -0.44
ERBB2-222ENST00000584908 ZNF320A2RRD8 509 aa12.29□□□□□ -0.44
ERBB2-222ENST00000584908 CEBPZOSA8MTT3 80 aa12.29□□□□□ -0.44
ERBB2-222ENST00000584908 LYRM1O43325 122 aa12.29□□□□□ -0.44
ERBB2-222ENST00000584908 EDN2P20800 178 aa12.29□□□□□ -0.44
ERBB2-222ENST00000584908 Q8N1Y9 231 aa12.29□□□□□ -0.44
ERBB2-222ENST00000584908 PINX1Q96BK5 328 aaKnown RBP12.29□□□□□ -0.44
ERBB2-222ENST00000584908 FNDC4Q9H6D8 234 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-222ENST00000584908 HEYLQ9NQ87 328 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-222ENST00000584908 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
ERBB2-222ENST00000584908 IGHV3-35A0A0C4DH35 117 aa12.28□□□□□ -0.44
ERBB2-222ENST00000584908 C9orf170A2RU37 121 aa12.28□□□□□ -0.44
ERBB2-222ENST00000584908 IZUMO1RA6ND01 250 aa12.28□□□□□ -0.44
ERBB2-222ENST00000584908 K7EMT4 169 aa12.28□□□□□ -0.44
ERBB2-222ENST00000584908 NPBWR1P48145 328 aa12.28□□□□□ -0.44
ERBB2-222ENST00000584908 RELQ04864 619 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-222ENST00000584908 CD300EQ496F6 205 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-222ENST00000584908 TM4SF20Q53R12 229 aa12.28□□□□□ -0.44
ERBB2-222ENST00000584908 UBAC2Q8NBM4 344 aa12.28□□□□□ -0.44
ERBB2-222ENST00000584908 TMEM170AQ8WVE7 144 aa12.28□□□□□ -0.44
ERBB2-222ENST00000584908 MRPL27Q9P0M9 148 aaKnown RBP12.28□□□□□ -0.44
ERBB2-222ENST00000584908 FAM90A26D6RGX4 464 aa12.27□□□□□ -0.45
ERBB2-222ENST00000584908 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
ERBB2-222ENST00000584908 OR4E1P0C645 316 aa12.27□□□□□ -0.45
ERBB2-222ENST00000584908 DHRS2Q13268 280 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms