RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 PARP12Q9H0J9 701 aaKnown RBP2.33□□□□□ -2.04
CCDC178-213ENST00000583930 VSIRQ9H7M9 311 aa2.33□□□□□ -2.04
CCDC178-213ENST00000583930 BEX1Q9HBH7 125 aa2.33□□□□□ -2.04
CCDC178-213ENST00000583930 CELSR2Q9HCU4 2923 aa2.33□□□□□ -2.04
CCDC178-213ENST00000583930 LYRM2Q9NU23 88 aaPredicted RBP2.33□□□□□ -2.04
CCDC178-213ENST00000583930 TMEM14CQ9P0S9 112 aa2.33□□□□□ -2.04
CCDC178-213ENST00000583930 OR14J1Q9UGF5 321 aa2.33□□□□□ -2.04
CCDC178-213ENST00000583930 CACNA1BQ00975 2339 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 NSD1Q96L73 2696 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 TRAV34A0A0B4J273 112 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 A0A0G2JLM5 398 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 A6NIN4 97 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 SRRM4A7MD48 611 aaKnown RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 USP17L23D6RBM5 183 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 CCSO14618 274 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 TAAR5O14804 337 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 LY6HO94772 140 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 RAB9AP51151 201 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 CMC4P56277 68 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 PIGPP57054 158 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 RPL8P62917 257 aaKnown RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 BAMBIQ13145 260 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 KLF5Q13887 457 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 ANKRD55Q3KP44 614 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 PYDC2Q56P42 97 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 ZNF57Q68EA5 555 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 PRSS54Q6PEW0 395 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 IL34Q6ZMJ4 242 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 APRG1Q8IVJ8 170 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 DMBX1Q8NFW5 382 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 OR51H1Q8NH63 302 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 TMEM170AQ8WVE7 144 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 ARPC1AQ92747 370 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 NDUFAF3Q9BU61 184 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 C6orf62Q9GZU0 229 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 CCL28Q9NRJ3 127 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 KCNIP3Q9Y2W7 256 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 ABCA12Q86UK0 2595 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 TRAV1-1A0A0B4J248 108 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 FBLL1A6NHQ2 334 aaKnown RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 SEC14L6B5MCN3 397 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 NDUFA4O00483 81 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 PET100P0DJ07 73 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 RRAS2P62070 204 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 ARF6P62330 175 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 TMEM267Q0VDI3 215 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 UBE2V1Q13404 147 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 RGS21Q2M5E4 152 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 FBLN7Q53RD9 439 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 LINC00322Q6ZN03 302 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 C19orf18Q8NEA5 215 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 LINC01006Q8NI28 216 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 DPF1Q92782 380 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 PHYHIPLQ96FC7 376 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 RNF2Q99496 336 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 GINS4Q9BRT9 223 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 ZNF430Q9H8G1 570 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 MAP6D1Q9H9H5 199 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 CHMP1AQ9HD42 196 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 KCNIP2Q9NS61 270 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 GNG12Q9UBI6 72 aa2.32□□□□□ -2.04
CCDC178-213ENST00000583930 RCL1Q9Y2P8 373 aaKnown RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 TSSC4Q9Y5U2 329 aaPredicted RBP2.32□□□□□ -2.04
CCDC178-213ENST00000583930 RPS10-NUDT3A0A1W2PQS6 291 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 K7EIM0 57 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 DHFRP00374 187 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 PMP2P02689 132 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 EDDM3BP56851 147 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 CD81P60033 236 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 PPP1R1AQ13522 171 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 TMEM41BQ5BJD5 291 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 LHFPL4Q7Z7J7 247 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 OR8U1Q8NH10 309 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 MARCH1Q8TCQ1 289 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 TMED6Q8WW62 240 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 GPR146Q96CH1 333 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 MED9Q9NWA0 146 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 ZFHX3Q15911 3703 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 TRAV41A0A0B4J266 112 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 SMIM30A4D0T7 59 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 BTBD17A6NE02 478 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 C15orf62A8K5M9 175 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 MRPS12O15235 138 aaKnown RBP2.31□□□□□ -2.04
CCDC178-213ENST00000583930 S1PR2O95136 353 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 IGKV1-16P04430 117 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 HSPB1P04792 205 aaKnown RBP2.31□□□□□ -2.04
CCDC178-213ENST00000583930 IFNA6P05013 189 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 NMBP08949 121 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 NFYAP23511 347 aaPredicted RBP2.31□□□□□ -2.04
CCDC178-213ENST00000583930 LPAR6P43657 344 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 FHITP49789 147 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 KRTAP10-3P60369 221 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 SELENOTP62341 195 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 SLC35B1P78383 322 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 KLRD1Q13241 179 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 OPCMLQ14982 345 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 RPL39P5Q59GN2 51 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 TCTEX1D4Q5JR98 221 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 DNLZQ5SXM8 178 aa2.31□□□□□ -2.04
CCDC178-213ENST00000583930 PQLC2Q6ZP29 291 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms