RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 UCP3P55916 312 aa10.63□□□□□ -0.71
ITGB4-208ENST00000582629 LSM3P62310 102 aaKnown RBP10.63□□□□□ -0.71
ITGB4-208ENST00000582629 PAFAH1B2P68402 229 aa10.63□□□□□ -0.71
ITGB4-208ENST00000582629 TCF24Q7RTU0 167 aa10.63□□□□□ -0.71
ITGB4-208ENST00000582629 MRGPRFQ96AM1 343 aa10.63□□□□□ -0.71
ITGB4-208ENST00000582629 YIPF6Q96EC8 236 aa10.63□□□□□ -0.71
ITGB4-208ENST00000582629 RARRES2Q99969 163 aa10.63□□□□□ -0.71
ITGB4-208ENST00000582629 VCX3AQ9NNX9 186 aa10.63□□□□□ -0.71
ITGB4-208ENST00000582629 IGHV3OR16-13A0A075B7E8 117 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 IGHV3-74A0A0B4J1X5 117 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 SMIM31A0A1B0GVY4 71 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 IGHV3-48P01763 117 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 APOA1P02647 267 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 RCVRNP35243 200 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 LGALS9CQ6DKI2 356 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 GBGT1Q8N5D6 347 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 RPP25LQ8N5L8 163 aaKnown RBP10.62□□□□□ -0.71
ITGB4-208ENST00000582629 MFFQ9GZY8 342 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 C11orf68Q9H3H3 251 aaKnown RBP10.62□□□□□ -0.71
ITGB4-208ENST00000582629 VSIRQ9H7M9 311 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 DNAH10Q8IVF4 4471 aa10.62□□□□□ -0.71
ITGB4-208ENST00000582629 NPBWR1P48145 328 aa10.61□□□□□ -0.71
ITGB4-208ENST00000582629 TOMM20LQ6UXN7 152 aa10.61□□□□□ -0.71
ITGB4-208ENST00000582629 SNX29P2Q8IUI4 249 aa10.61□□□□□ -0.71
ITGB4-208ENST00000582629 DUSP18Q8NEJ0 188 aa10.61□□□□□ -0.71
ITGB4-208ENST00000582629 OR11H2Q8NH07 326 aa10.61□□□□□ -0.71
ITGB4-208ENST00000582629 C11orf45Q8TAV5 145 aa10.61□□□□□ -0.71
ITGB4-208ENST00000582629 ST8SIA2Q92186 375 aa10.61□□□□□ -0.71
ITGB4-208ENST00000582629 COMMD3Q9UBI1 195 aa10.61□□□□□ -0.71
ITGB4-208ENST00000582629 TRAV2A0A0B4J234 112 aa10.6□□□□□ -0.71
ITGB4-208ENST00000582629 DNASE2O00115 360 aaPredicted RBP10.6□□□□□ -0.71
ITGB4-208ENST00000582629 ST8SIA3O43173 380 aa10.6□□□□□ -0.71
ITGB4-208ENST00000582629 DFFBO76075 338 aa10.6□□□□□ -0.71
ITGB4-208ENST00000582629 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
ITGB4-208ENST00000582629 NANOS2P60321 138 aaKnown RBP10.6□□□□□ -0.71
ITGB4-208ENST00000582629 RND3P61587 244 aa10.6□□□□□ -0.71
ITGB4-208ENST00000582629 RBMS2Q15434 407 aaKnown RBP10.6□□□□□ -0.71
ITGB4-208ENST00000582629 ZNF600Q6ZNG1 722 aa10.6□□□□□ -0.71
ITGB4-208ENST00000582629 TMEM231Q9H6L2 316 aa10.6□□□□□ -0.71
ITGB4-208ENST00000582629 A0A087WXM4 84 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 INS-IGF2F8WCM5 200 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 DEDDO75618 318 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 IFNA4P05014 189 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 SNCAP37840 140 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 TMEM187Q14656 261 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 SPINK9Q5DT21 86 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 SLC35G3Q8N808 338 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 ZNF486Q96H40 463 aaPredicted RBP10.59□□□□□ -0.71
ITGB4-208ENST00000582629 MS4A6AQ9H2W1 248 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 ZFAND3Q9H8U3 227 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 FBXL17Q9UF56 701 aa10.59□□□□□ -0.71
ITGB4-208ENST00000582629 PUS1Q9Y606 427 aaKnown RBP eCLIP10.59□□□□□ -0.71
ITGB4-208ENST00000582629 CORTO00230 105 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 ATG12O94817 140 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 TMEM50AO95807 157 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 IGKV1-5P01602 117 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 APOHP02749 345 aaPredicted RBP10.58□□□□□ -0.72
ITGB4-208ENST00000582629 PGAM2P15259 253 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 ELK1P19419 428 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 AKR1C2P52895 323 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 SUB1P53999 127 aaKnown RBP eCLIP10.58□□□□□ -0.72
ITGB4-208ENST00000582629 DEFB131AP59861 70 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 RPL11P62913 178 aaKnown RBP10.58□□□□□ -0.72
ITGB4-208ENST00000582629 IZUMO4Q1ZYL8 232 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 PVRIGQ6DKI7 326 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 LILRB2Q8N423 598 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 PDCD10Q9BUL8 212 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 VPS13DQ5THJ4 4388 aa10.58□□□□□ -0.72
ITGB4-208ENST00000582629 A0A0B4J293 547 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 IGHV3-66A0A0C4DH42 116 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 A0A1W2PS18 150 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 M0QYG6 137 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 HPGDSO60760 199 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 IFNA17P01571 189 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 P0C879 139 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 PIGPP57054 158 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 TCTAP57738 103 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 NCS1P62166 190 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 LEMD1Q68G75 181 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 LHFPL1Q86WI0 220 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 STHQ8IWL8 128 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 C2CD4CQ8TF44 421 aa10.57□□□□□ -0.72
ITGB4-208ENST00000582629 A0A1B0GU03 582 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 SCGB2A1O75556 95 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 TNFAIP8O95379 198 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 RNASE2P10153 161 aaKnown RBP10.56□□□□□ -0.72
ITGB4-208ENST00000582629 PI3P19957 117 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 HOXA1P49639 335 aaPredicted RBP10.56□□□□□ -0.72
ITGB4-208ENST00000582629 VBP1P61758 197 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 RNASE10Q5GAN6 216 aaKnown RBP10.56□□□□□ -0.72
ITGB4-208ENST00000582629 ARRDC1Q8N5I2 433 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 FAM24BQ8N5W8 94 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 METTL26Q96S19 204 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 TP53RKQ96S44 253 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 ENY2Q9NPA8 101 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 RABAC1Q9UI14 185 aa10.56□□□□□ -0.72
ITGB4-208ENST00000582629 AGRNO00468 2067 aa10.55□□□□□ -0.72
ITGB4-208ENST00000582629 C3orf85A0A1B0GTC6 90 aa10.55□□□□□ -0.72
ITGB4-208ENST00000582629 DEFB4AO15263 64 aa10.55□□□□□ -0.72
ITGB4-208ENST00000582629 CLN5O75503 358 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms