RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	NANOS2	P60321	138 aa	Known RBP	8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	NCS1	P62166	190 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	PRCD	Q00LT1	54 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	LEMD1	Q68G75	181 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	LPCAT3	Q6P1A2	487 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	TCF24	Q7RTU0	167 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	LILRB2	Q8N423	598 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	TMEM217	Q8N7C4	229 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	ST8SIA2	Q92186	375 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	OR10C1	Q96KK4	312 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	CMTM3	Q96MX0	182 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	RARRES2	Q99969	163 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	NXF2	Q9GZY0	626 aa	Known RBP	8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	FBXL17	Q9UF56	701 aa		8.55	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	SMIM31	A0A1B0GVY4	71 aa		8.54	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	ST8SIA3	O43173	380 aa		8.54	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	HPGDS	O60760	199 aa		8.54	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	PGAM2	P15259	253 aa		8.54	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	RPL11	P62913	178 aa	Known RBP	8.54	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	ERH	P84090	104 aa	Known RBP	8.54	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	FAM90A2P	Q658T7	463 aa		8.54	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	TOMM20L	Q6UXN7	152 aa		8.54	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	CADM3	Q8N126	398 aa		8.54	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	OR11H2	Q8NH07	326 aa		8.54	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	DNASE2	O00115	360 aa	Predicted RBP	8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	DFFB	O76075	338 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	CA1	P00915	261 aa	Predicted RBP	8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	ATF4	P18848	351 aa	Predicted RBP	8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	ELK1	P19419	428 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	RCVRN	P35243	200 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	DEFB131A	P59861	70 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	HSPE1	P61604	102 aa	Known RBP	8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	VBP1	P61758	197 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	PAFAH1B2	P68402	229 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	FAM24B	Q8N5W8	94 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	SLC35G3	Q8N808	338 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	ZNF114	Q8NC26	417 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	TXN2	Q99757	166 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	MS4A6A	Q9H2W1	248 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	VCX3A	Q9NNX9	186 aa		8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114	PUS1	Q9Y606	427 aa	Known RBP eCLIP	8.53	□□□□□ -1.04
CDK5RAP3-223	ENST00000582114		A0A087WXM4	84 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	FAM25A	B3EWG3	89 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	FAM25C	B3EWG5	89 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	FAM25G	B3EWG6	89 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	IFNA17	P01571	189 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	IGKV1-5	P01602	117 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	APOA1	P02647	267 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	AKR1C2	P52895	323 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	UCP3	P55916	312 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	DUSP18	Q8NEJ0	188 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	C11orf45	Q8TAV5	145 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	GATAD1	Q8WUU5	269 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	TP53RK	Q96S44	253 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	GINS3	Q9BRX5	216 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	FUNDC2	Q9BWH2	189 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	ZFAND3	Q9H8U3	227 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	SCPEP1	Q9HB40	452 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	FAM212B	Q9NTI7	297 aa	Predicted RBP	8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	RABAC1	Q9UI14	185 aa		8.52	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114		A0A0B4J293	547 aa		8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114		A0A1B0GU03	582 aa		8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	SNCA	P37840	140 aa		8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	NPBWR1	P48145	328 aa		8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	HOXA1	P49639	335 aa	Predicted RBP	8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	PPP5C	P53041	499 aa		8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	CMC4	P56277	68 aa	Predicted RBP	8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	PIGP	P57054	158 aa		8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	RBMS2	Q15434	407 aa	Known RBP	8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	SP6	Q3SY56	376 aa		8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	ZNF600	Q6ZNG1	722 aa		8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	MRPL36	Q9P0J6	103 aa	Known RBP	8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	KLK11	Q9UBX7	282 aa		8.51	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	TMEM50A	O95807	157 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	CD3D	P04234	171 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	ETV6	P41212	452 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	TMEM187	Q14656	261 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	MLANA	Q16655	118 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	TRIM16L	Q309B1	348 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	RNASE10	Q5GAN6	216 aa	Known RBP	8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	STH	Q8IWL8	128 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	STXBP6	Q8NFX7	210 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	OR4D10	Q8NGI6	311 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	OR52I2	Q8NH67	350 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	PDCD10	Q9BUL8	212 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	VSIR	Q9H7M9	311 aa		8.5	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114		A0A0G2JRQ6	117 aa		8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	C3orf85	A0A1B0GTC6	90 aa		8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	TNFAIP8	O95379	198 aa		8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	IFNA4	P05014	189 aa		8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114		P0C879	139 aa		8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	RNASE2	P10153	161 aa	Known RBP	8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	OPRK1	P41145	380 aa		8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	RND3	P61587	244 aa		8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	LGALS9C	Q6DKI2	356 aa		8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	LHFPL1	Q86WI0	220 aa		8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	RNASE11	Q8TAA1	199 aa	Known RBP	8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	C11orf68	Q9H3H3	251 aa	Known RBP	8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	FNDC4	Q9H6D8	234 aa	Predicted RBP	8.49	□□□□□ -1.05
CDK5RAP3-223	ENST00000582114	ENY2	Q9NPA8	101 aa		8.49	□□□□□ -1.05

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms