RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ANXA3P12429 323 aa9.59□□□□□ -0.87
SNORD55-201ENST00000581525 CCR6P51684 374 aa9.59□□□□□ -0.87
SNORD55-201ENST00000581525 ELLP55199 621 aaPredicted RBP9.59□□□□□ -0.87
SNORD55-201ENST00000581525 FAM106AQ4KMX7 169 aa9.59□□□□□ -0.87
SNORD55-201ENST00000581525 TRIQKQ629K1 86 aa9.59□□□□□ -0.87
SNORD55-201ENST00000581525 LYZL2Q7Z4W2 148 aa9.59□□□□□ -0.87
SNORD55-201ENST00000581525 CCDC32Q9BV29 185 aa9.59□□□□□ -0.87
SNORD55-201ENST00000581525 C21orf62Q9NYP8 219 aa9.59□□□□□ -0.87
SNORD55-201ENST00000581525 COL7A1Q02388 2944 aa9.59□□□□□ -0.87
SNORD55-201ENST00000581525 SORL1Q92673 2214 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 A0A1B0GU03 582 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 IGHV3-23P01764 117 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 CTSGP08311 255 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 SULT1A3P0DMM9 295 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 SULT1A4P0DMN0 295 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 SPNP16150 400 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 ADMP35318 185 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 CENPSQ8N2Z9 138 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 S100ZQ8WXG8 99 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 GAR1Q9NY12 217 aaKnown RBP9.58□□□□□ -0.88
SNORD55-201ENST00000581525 HSPB7Q9UBY9 170 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 CACNG5Q9UF02 275 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 S4R3C0 116 aa9.58□□□□□ -0.88
SNORD55-201ENST00000581525 C2orf70A6NJV1 201 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 CENPXA8MT69 81 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 GP9P14770 177 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 SNCAP37840 140 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 HTR2BP41595 481 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 SUB1P53999 127 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNORD55-201ENST00000581525 MFAP4P55083 255 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 PPP1R1AQ13522 171 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 SMCO1Q147U7 214 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 DEFB114Q30KQ6 69 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 ANKRD55Q3KP44 614 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 C2orf83Q53S99 150 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 PLET1Q6UQ28 207 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 Q8N1Y9 231 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 CHRDL1Q9BU40 450 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 PDCD10Q9BUL8 212 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 ZC4H2Q9NQZ6 224 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 TECRQ9NZ01 308 aaKnown RBP9.57□□□□□ -0.88
SNORD55-201ENST00000581525 PTTG2Q9NZH5 202 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 TMED3Q9Y3Q3 217 aa9.57□□□□□ -0.88
SNORD55-201ENST00000581525 TMEM213A2RRL7 107 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 C9orf170A2RU37 121 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 A8MZ25 164 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 K7EMT4 169 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 CORTO00230 105 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 NDUFA4O00483 81 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 MT-CO2P00403 227 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 FOLR2P14207 255 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 CBLN1P23435 193 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 GPR183P32249 361 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 INPP1P49441 399 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 ATP5IP56385 69 aaPredicted RBP9.56□□□□□ -0.88
SNORD55-201ENST00000581525 TNFRSF9Q07011 255 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 TMED4Q7Z7H5 227 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 RNASE11Q8TAA1 199 aaKnown RBP9.56□□□□□ -0.88
SNORD55-201ENST00000581525 MARC2Q969Z3 335 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 PRR25Q96S07 402 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 B9D2Q9BPU9 175 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 PRR13Q9NZ81 148 aa9.56□□□□□ -0.88
SNORD55-201ENST00000581525 OR2T8A6NH00 312 aa9.55□□□□□ -0.88
SNORD55-201ENST00000581525 ZNF785A8K8V0 405 aa9.55□□□□□ -0.88
SNORD55-201ENST00000581525 FAM90A26D6RGX4 464 aa9.55□□□□□ -0.88
SNORD55-201ENST00000581525 LYRM1O43325 122 aa9.55□□□□□ -0.88
SNORD55-201ENST00000581525 SPINK9Q5DT21 86 aa9.55□□□□□ -0.88
SNORD55-201ENST00000581525 UNQ9165/PRO28630Q6UXU0 137 aa9.55□□□□□ -0.88
SNORD55-201ENST00000581525 TMEM170AQ8WVE7 144 aa9.55□□□□□ -0.88
SNORD55-201ENST00000581525 OR10C1Q96KK4 312 aa9.55□□□□□ -0.88
SNORD55-201ENST00000581525 FNDC4Q9H6D8 234 aaPredicted RBP9.55□□□□□ -0.88
SNORD55-201ENST00000581525 PALMDQ9NP74 551 aa9.55□□□□□ -0.88
SNORD55-201ENST00000581525 MRPL27Q9P0M9 148 aaKnown RBP9.55□□□□□ -0.88
SNORD55-201ENST00000581525 FLVCR2Q9UPI3 526 aa9.55□□□□□ -0.88
SNORD55-201ENST00000581525 TMEM50AO95807 157 aa9.54□□□□□ -0.88
SNORD55-201ENST00000581525 OR4E1P0C645 316 aa9.54□□□□□ -0.88
SNORD55-201ENST00000581525 HOXA1P49639 335 aaPredicted RBP9.54□□□□□ -0.88
SNORD55-201ENST00000581525 DEFB121Q5J5C9 76 aa9.54□□□□□ -0.88
SNORD55-201ENST00000581525 LCN12Q6JVE5 192 aa9.54□□□□□ -0.88
SNORD55-201ENST00000581525 OR4X1Q8NH49 305 aa9.54□□□□□ -0.88
SNORD55-201ENST00000581525 RNASEH2CQ8TDP1 164 aaKnown RBP9.54□□□□□ -0.88
SNORD55-201ENST00000581525 TMEM190Q8WZ59 177 aa9.54□□□□□ -0.88
SNORD55-201ENST00000581525 MISP3Q96FF7 219 aa9.54□□□□□ -0.88
SNORD55-201ENST00000581525 ENY2Q9NPA8 101 aa9.54□□□□□ -0.88
SNORD55-201ENST00000581525 UFC1Q9Y3C8 167 aa9.54□□□□□ -0.88
SNORD55-201ENST00000581525 U3KQ87 197 aa9.54□□□□□ -0.88
SNORD55-201ENST00000581525 HUWE1Q7Z6Z7 4374 aaKnown RBP9.54□□□□□ -0.88
SNORD55-201ENST00000581525 IGHV3-21A0A0B4J1V1 117 aa9.53□□□□□ -0.88
SNORD55-201ENST00000581525 IZUMO1RA6ND01 250 aa9.53□□□□□ -0.88
SNORD55-201ENST00000581525 C15orf62A8K5M9 175 aa9.53□□□□□ -0.88
SNORD55-201ENST00000581525 TCRBP04435 133 aa9.53□□□□□ -0.88
SNORD55-201ENST00000581525 VAMP1P23763 118 aa9.53□□□□□ -0.88
SNORD55-201ENST00000581525 NPBWR1P48145 328 aa9.53□□□□□ -0.88
SNORD55-201ENST00000581525 RELQ04864 619 aaPredicted RBP9.53□□□□□ -0.88
SNORD55-201ENST00000581525 DHRS2Q13268 280 aa9.53□□□□□ -0.88
SNORD55-201ENST00000581525 CD300EQ496F6 205 aaPredicted RBP9.53□□□□□ -0.88
SNORD55-201ENST00000581525 TM4SF20Q53R12 229 aa9.53□□□□□ -0.88
SNORD55-201ENST00000581525 LYG2Q86SG7 212 aa9.53□□□□□ -0.88
SNORD55-201ENST00000581525 NOXA1Q86UR1 476 aa9.53□□□□□ -0.88
SNORD55-201ENST00000581525 UXS1Q8NBZ7 420 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms