RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ASB17Q8WXJ9 295 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 VCX3BQ9H321 246 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 UBAP1Q9NZ09 502 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 C5P01031 1676 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 RGPD5Q99666 1765 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 KMT2BQ9UMN6 2715 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 PRRC2BQ5JSZ5 2229 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 PTPRSQ13332 1948 aa1.66□□□□□ -2.14
SMCHD1-205ENST00000581383 MALRD1Q5VYJ5 2156 aa1.65□□□□□ -2.14
SMCHD1-205ENST00000581383 MRC1P22897 1456 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 A0A0J9YW62 118 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 A0A1B0GW54 56 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 A8MUN3 132 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 CREBL2O60519 120 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 NSA2O95478 260 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 LGALS1P09382 135 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 TFPTP0C1Z6 253 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 PSMB8P28062 276 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 RPL28P46779 137 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 RAB13P51153 203 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 NAA20P61599 178 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 EMX1Q04741 257 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 AKR1C1Q04828 323 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 FABP9Q0Z7S8 132 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 TNFAIP8L3Q5GJ75 292 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 ZNF550Q7Z398 422 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 KTN1-AS1Q86SY8 53 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 TBC1D19Q8N5T2 526 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 ARL5BQ96KC2 179 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 SPZ1Q9BXG8 430 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 OR51I1Q9H343 314 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 XPNPEP1Q9NQW7 623 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 AK3Q9UIJ7 227 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 C4AP0C0L4 1744 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 TJP1Q07157 1748 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 PKD1L3Q7Z443 1732 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 KIAA1551Q9HCM1 1747 aa1.65□□□□□ -2.15
SMCHD1-205ENST00000581383 RGPD2P0DJD1 1756 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 SBF2Q86WG5 1849 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 KIF20BQ96Q89 1820 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 LY75O60449 1722 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 TRAV38-1A0A0B4J264 116 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 ACOX3O15254 700 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 NIPSNAP2O75323 286 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 KRT75O95678 551 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 PRB1P04280 392 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 UCHL3P15374 230 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 EMP1P54849 157 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 TCL1AP56279 114 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 TNFAIP6P98066 277 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 TMEM155Q4W5P6 130 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 SSX8Q7RTT4 187 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 COA5Q86WW8 74 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 MNS1Q8NEH6 495 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 PARVGQ9HBI0 331 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 NAT8Q9UHE5 227 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 COL4A1P02462 1669 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 COL4A5P29400 1685 aa1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 TNRC6CQ9HCJ0 1690 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-205ENST00000581383 ANKRD26Q9UPS8 1709 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 SDK1Q7Z5N4 2213 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 RTTNQ86VV8 2226 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 CPAMD8Q8IZJ3 1885 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 TRAV7A0A075B6U4 112 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 IGHV1-18A0A0C4DH31 117 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 I3L521 148 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 TGOLN2O43493 480 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 PPBPP02775 128 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 KRT7P08729 469 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 HAAOP46952 286 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 CSN1S1P47710 185 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 MARCKSL1P49006 195 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 RAB14P61106 215 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 TMEM42Q69YG0 159 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 C10orf67Q8IYJ2 551 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 DEFB125Q8N687 156 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 GPR32P1Q8NGA4 272 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 OR51D1Q8NGF3 324 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 RNF133Q8WVZ7 376 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 PTH2Q96A98 100 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 DOHHQ9BU89 302 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 DOK5Q9P104 306 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 GREB1Q4ZG55 1949 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 SCN7AQ01118 1682 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 QSER1Q2KHR3 1735 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 TIAM2Q8IVF5 1701 aa1.63□□□□□ -2.15
SMCHD1-205ENST00000581383 N4BP2Q86UW6 1770 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 KIF24Q5T7B8 1368 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 MAP2P11137 1827 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 HMSDA8MTL9 139 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 H7C2G1 150 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 LEPROTO15243 131 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 C1QCP02747 245 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 ISG15P05161 165 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 CALB1P05937 261 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 CCL5P13501 91 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 ALDH3A1P30838 453 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 S100A7P31151 101 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 AQP4P55087 323 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 OR4D2P58180 307 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms