RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 DCKP27707 260 aa9.57□□□□□ -0.88
CSNK1D-213ENST00000580446 ATP5G3P48201 142 aa9.57□□□□□ -0.88
CSNK1D-213ENST00000580446 ALDH3B2P48448 385 aa9.57□□□□□ -0.88
CSNK1D-213ENST00000580446 C1orf100Q5SVJ3 147 aa9.57□□□□□ -0.88
CSNK1D-213ENST00000580446 PQLC1Q8N2U9 271 aa9.57□□□□□ -0.88
CSNK1D-213ENST00000580446 FAM89BQ8N5H3 189 aa9.57□□□□□ -0.88
CSNK1D-213ENST00000580446 OAZ3Q9UMX2 235 aa9.57□□□□□ -0.88
CSNK1D-213ENST00000580446 HLA-DRB4X5D2U9 266 aa9.57□□□□□ -0.88
CSNK1D-213ENST00000580446 TRAV26-1A0A087WT03 109 aa9.56□□□□□ -0.88
CSNK1D-213ENST00000580446 NPPCP23582 126 aa9.56□□□□□ -0.88
CSNK1D-213ENST00000580446 MRPS15P82914 257 aaKnown RBP9.56□□□□□ -0.88
CSNK1D-213ENST00000580446 OR5I1Q13606 314 aa9.56□□□□□ -0.88
CSNK1D-213ENST00000580446 SMN1Q16637 294 aaKnown RBP9.56□□□□□ -0.88
CSNK1D-213ENST00000580446 TMPRSS11AQ6ZMR5 421 aa9.56□□□□□ -0.88
CSNK1D-213ENST00000580446 SPAG16Q8N0X2 631 aa9.56□□□□□ -0.88
CSNK1D-213ENST00000580446 OR4B1Q8NGF8 309 aa9.56□□□□□ -0.88
CSNK1D-213ENST00000580446 URM1Q9BTM9 101 aaKnown RBP9.56□□□□□ -0.88
CSNK1D-213ENST00000580446 FAM212BQ9NTI7 297 aaPredicted RBP9.56□□□□□ -0.88
CSNK1D-213ENST00000580446 HOXB6P17509 224 aaKnown RBP9.55□□□□□ -0.88
CSNK1D-213ENST00000580446 CLDN12P56749 244 aa9.55□□□□□ -0.88
CSNK1D-213ENST00000580446 ACSM3Q53FZ2 586 aa9.55□□□□□ -0.88
CSNK1D-213ENST00000580446 LSM10Q969L4 123 aaKnown RBP9.55□□□□□ -0.88
CSNK1D-213ENST00000580446 GNPNAT1Q96EK6 184 aaPredicted RBP9.55□□□□□ -0.88
CSNK1D-213ENST00000580446 HSD17B10Q99714 261 aaKnown RBP9.55□□□□□ -0.88
CSNK1D-213ENST00000580446 MAGT1Q9H0U3 335 aa9.55□□□□□ -0.88
CSNK1D-213ENST00000580446 SULT1C2O00338 296 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 BPNT1O95861 308 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 CDK1P06493 297 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 RBM48Q5RL73 367 aaKnown RBP9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 TTC23Q5W5X9 447 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 ZNF600Q6ZNG1 722 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 DMBX1Q8NFW5 382 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 OR1L8Q8NGR8 309 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 METTL26Q96S19 204 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 TMEM208Q9BTX3 173 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 NDUFA4L2Q9NRX3 87 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 OR2W1Q9Y3N9 320 aa9.54□□□□□ -0.88
CSNK1D-213ENST00000580446 A0A1W2PS18 150 aa9.53□□□□□ -0.88
CSNK1D-213ENST00000580446 LYRM9A8MSI8 78 aa9.53□□□□□ -0.88
CSNK1D-213ENST00000580446 F6UB75 175 aa9.53□□□□□ -0.88
CSNK1D-213ENST00000580446 HLA-DQB1P01920 261 aa9.53□□□□□ -0.88
CSNK1D-213ENST00000580446 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
CSNK1D-213ENST00000580446 OR4C16Q8NGL9 310 aa9.53□□□□□ -0.88
CSNK1D-213ENST00000580446 APH1BQ8WW43 257 aa9.53□□□□□ -0.88
CSNK1D-213ENST00000580446 DCSTAMPQ9H295 470 aa9.53□□□□□ -0.88
CSNK1D-213ENST00000580446 ELF5Q9UKW6 265 aaPredicted RBP9.53□□□□□ -0.88
CSNK1D-213ENST00000580446 AZU1P20160 251 aa9.52□□□□□ -0.89
CSNK1D-213ENST00000580446 SNRPD3P62318 126 aaKnown RBP9.52□□□□□ -0.89
CSNK1D-213ENST00000580446 ODF1Q14990 250 aa9.52□□□□□ -0.89
CSNK1D-213ENST00000580446 LINC00052Q96N35 136 aa9.52□□□□□ -0.89
CSNK1D-213ENST00000580446 TXN2Q99757 166 aa9.52□□□□□ -0.89
CSNK1D-213ENST00000580446 FGF20Q9NP95 211 aaPredicted RBP9.52□□□□□ -0.89
CSNK1D-213ENST00000580446 ZNF446Q9NWS9 450 aa9.52□□□□□ -0.89
CSNK1D-213ENST00000580446 POMPQ9Y244 141 aa9.52□□□□□ -0.89
CSNK1D-213ENST00000580446 OR51B2Q9Y5P1 312 aa9.52□□□□□ -0.89
CSNK1D-213ENST00000580446 DBX1A6NMT0 343 aa9.51□□□□□ -0.89
CSNK1D-213ENST00000580446 EBAG9O00559 213 aa9.51□□□□□ -0.89
CSNK1D-213ENST00000580446 CRYBB3P26998 211 aa9.51□□□□□ -0.89
CSNK1D-213ENST00000580446 OR1P1Q8NH06 330 aa9.51□□□□□ -0.89
CSNK1D-213ENST00000580446 GFI1Q99684 422 aa9.51□□□□□ -0.89
CSNK1D-213ENST00000580446 CCL28Q9NRJ3 127 aa9.51□□□□□ -0.89
CSNK1D-213ENST00000580446 MRPS18AQ9NVS2 196 aaKnown RBP9.51□□□□□ -0.89
CSNK1D-213ENST00000580446 PLAC8L1A1L4L8 177 aa9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 CBY3A6NI87 242 aa9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 SIVA1O15304 175 aa9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 DIRAS3O95661 229 aa9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 NQO2P16083 231 aa9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 HNRNPA3P51991 378 aaKnown RBP9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 TAS2R31P59538 309 aa9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 HSD17B13Q7Z5P4 300 aaPredicted RBP9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 RHOXF1Q8NHV9 184 aa9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 RXFP4Q8TDU9 374 aa9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 RAB3CQ96E17 227 aa9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 PLGRKTQ9HBL7 147 aa9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 MRPL36Q9P0J6 103 aaKnown RBP9.5□□□□□ -0.89
CSNK1D-213ENST00000580446 TNXBP22105 4242 aa9.49□□□□□ -0.89
CSNK1D-213ENST00000580446 FAT4Q6V0I7 4981 aa9.49□□□□□ -0.89
CSNK1D-213ENST00000580446 HOXA5P20719 270 aa9.49□□□□□ -0.89
CSNK1D-213ENST00000580446 RORCP51449 518 aa9.49□□□□□ -0.89
CSNK1D-213ENST00000580446 THOC7Q6I9Y2 204 aaKnown RBP9.49□□□□□ -0.89
CSNK1D-213ENST00000580446 ZNF485Q8NCK3 441 aa9.49□□□□□ -0.89
CSNK1D-213ENST00000580446 OR56B1Q8NGI3 324 aa9.49□□□□□ -0.89
CSNK1D-213ENST00000580446 OR51H1Q8NH63 302 aa9.49□□□□□ -0.89
CSNK1D-213ENST00000580446 SECTM1Q8WVN6 248 aa9.49□□□□□ -0.89
CSNK1D-213ENST00000580446 SAV1Q9H4B6 383 aaPredicted RBP9.49□□□□□ -0.89
CSNK1D-213ENST00000580446 EI24O14681 340 aa9.48□□□□□ -0.89
CSNK1D-213ENST00000580446 DENRO43583 198 aaKnown RBP9.48□□□□□ -0.89
CSNK1D-213ENST00000580446 NXPH4O95158 308 aa9.48□□□□□ -0.89
CSNK1D-213ENST00000580446 TMEM50AO95807 157 aa9.48□□□□□ -0.89
CSNK1D-213ENST00000580446 PTHLHP12272 177 aa9.48□□□□□ -0.89
CSNK1D-213ENST00000580446 PSG9Q00887 426 aa9.48□□□□□ -0.89
CSNK1D-213ENST00000580446 POU2AF1Q16633 256 aa9.48□□□□□ -0.89
CSNK1D-213ENST00000580446 C16orf54Q6UWD8 224 aa9.48□□□□□ -0.89
CSNK1D-213ENST00000580446 CADM3Q8N126 398 aa9.48□□□□□ -0.89
CSNK1D-213ENST00000580446 ZNF701M0R085 212 aaPredicted RBP9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 HPRT1P00492 218 aa9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 ALPLP05186 524 aa9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 MYL12AP19105 171 aa9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 M6PRP20645 277 aa9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 TALDO1P37837 337 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms