RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 IGHV3-21A0A0B4J1V1 117 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 DUXBA0A1W2PPF3 345 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 TGOLN2O43493 480 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 SFT2D2O95562 160 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 SULT1A3P0DMM9 295 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 SULT1A4P0DMN0 295 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 VAMP1P23763 118 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 PPP1R1AQ13522 171 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 BSXQ3C1V8 233 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 ANKRD55Q3KP44 614 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 ADAMTSL5Q6ZMM2 481 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 S100ZQ8WXG8 99 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 CCDC32Q9BV29 185 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 CACFD1Q9UGQ2 172 aa14.69□□□□□ -0.06
SS18-208ENST00000577751 LSM4Q9Y4Z0 139 aaKnown RBP14.69□□□□□ -0.06
SS18-208ENST00000577751 RNASE2P10153 161 aaKnown RBP14.68□□□□□ -0.06
SS18-208ENST00000577751 FCGR2BP31994 310 aaPredicted RBP14.68□□□□□ -0.06
SS18-208ENST00000577751 SNCAP37840 140 aa14.68□□□□□ -0.06
SS18-208ENST00000577751 HOXA1P49639 335 aaPredicted RBP14.68□□□□□ -0.06
SS18-208ENST00000577751 FAM106AQ4KMX7 169 aa14.68□□□□□ -0.06
SS18-208ENST00000577751 PLET1Q6UQ28 207 aa14.68□□□□□ -0.06
SS18-208ENST00000577751 HAPLN4Q86UW8 402 aa14.68□□□□□ -0.06
SS18-208ENST00000577751 MISP3Q96FF7 219 aa14.68□□□□□ -0.06
SS18-208ENST00000577751 BSCL2Q96G97 398 aaPredicted RBP14.68□□□□□ -0.06
SS18-208ENST00000577751 ENY2Q9NPA8 101 aa14.68□□□□□ -0.06
SS18-208ENST00000577751 ZC4H2Q9NQZ6 224 aa14.68□□□□□ -0.06
SS18-208ENST00000577751 PTTG2Q9NZH5 202 aa14.68□□□□□ -0.06
SS18-208ENST00000577751 OR2T8A6NH00 312 aa14.67□□□□□ -0.06
SS18-208ENST00000577751 A8MWP6 167 aa14.67□□□□□ -0.06
SS18-208ENST00000577751 MT-CO2P00403 227 aa14.67□□□□□ -0.06
SS18-208ENST00000577751 SMCO1Q147U7 214 aa14.67□□□□□ -0.06
SS18-208ENST00000577751 DEFB121Q5J5C9 76 aa14.67□□□□□ -0.06
SS18-208ENST00000577751 SPSB3Q6PJ21 355 aa14.67□□□□□ -0.06
SS18-208ENST00000577751 TXN2Q99757 166 aa14.67□□□□□ -0.06
SS18-208ENST00000577751 ZNF436Q9C0F3 470 aaPredicted RBP14.67□□□□□ -0.06
SS18-208ENST00000577751 FLVCR2Q9UPI3 526 aa14.67□□□□□ -0.06
SS18-208ENST00000577751 C2orf70A6NJV1 201 aa14.66□□□□□ -0.06
SS18-208ENST00000577751 CORTO00230 105 aa14.66□□□□□ -0.06
SS18-208ENST00000577751 LYRM1O43325 122 aa14.66□□□□□ -0.06
SS18-208ENST00000577751 GP9P14770 177 aa14.66□□□□□ -0.06
SS18-208ENST00000577751 ADMP35318 185 aa14.66□□□□□ -0.06
SS18-208ENST00000577751 SUB1P53999 127 aaKnown RBP eCLIP14.66□□□□□ -0.06
SS18-208ENST00000577751 DCTN2Q13561 401 aaKnown RBP14.66□□□□□ -0.06
SS18-208ENST00000577751 UNQ9165/PRO28630Q6UXU0 137 aa14.66□□□□□ -0.06
SS18-208ENST00000577751 CHRDL1Q9BU40 450 aa14.66□□□□□ -0.06
SS18-208ENST00000577751 GAR1Q9NY12 217 aaKnown RBP14.66□□□□□ -0.06
SS18-208ENST00000577751 HSPB7Q9UBY9 170 aa14.66□□□□□ -0.06
SS18-208ENST00000577751 A0A1B0GU03 582 aa14.65□□□□□ -0.06
SS18-208ENST00000577751 C9orf170A2RU37 121 aa14.65□□□□□ -0.06
SS18-208ENST00000577751 PITX3O75364 302 aa14.65□□□□□ -0.06
SS18-208ENST00000577751 LY86O95711 162 aa14.65□□□□□ -0.06
SS18-208ENST00000577751 CTSGP08311 255 aa14.65□□□□□ -0.06
SS18-208ENST00000577751 FOLR2P14207 255 aa14.65□□□□□ -0.06
SS18-208ENST00000577751 EDN2P20800 178 aa14.65□□□□□ -0.06
SS18-208ENST00000577751 MFAP4P55083 255 aa14.65□□□□□ -0.06
SS18-208ENST00000577751 UBAC2Q8NBM4 344 aa14.65□□□□□ -0.06
SS18-208ENST00000577751 PINX1Q96BK5 328 aaKnown RBP14.65□□□□□ -0.06
SS18-208ENST00000577751 ZNF414Q96IQ9 312 aa14.65□□□□□ -0.06
SS18-208ENST00000577751 IGHV3-35A0A0C4DH35 117 aa14.64□□□□□ -0.07
SS18-208ENST00000577751 ZNF320A2RRD8 509 aa14.64□□□□□ -0.07
SS18-208ENST00000577751 TMEM213A2RRL7 107 aa14.64□□□□□ -0.07
SS18-208ENST00000577751 SLC25A6P12236 298 aa14.64□□□□□ -0.07
SS18-208ENST00000577751 HTR2BP41595 481 aa14.64□□□□□ -0.07
SS18-208ENST00000577751 TNFRSF9Q07011 255 aa14.64□□□□□ -0.07
SS18-208ENST00000577751 Q56UQ5 140 aa14.64□□□□□ -0.07
SS18-208ENST00000577751 OR2K2Q8NGT1 345 aa14.64□□□□□ -0.07
SS18-208ENST00000577751 HEYLQ9NQ87 328 aaPredicted RBP14.64□□□□□ -0.07
SS18-208ENST00000577751 TMED3Q9Y3Q3 217 aa14.64□□□□□ -0.07
SS18-208ENST00000577751 TGP01266 2768 aa14.63□□□□□ -0.07
SS18-208ENST00000577751 CEBPZOSA8MTT3 80 aa14.63□□□□□ -0.07
SS18-208ENST00000577751 IGHV3-48P01763 117 aa14.63□□□□□ -0.07
SS18-208ENST00000577751 OR4E1P0C645 316 aa14.63□□□□□ -0.07
SS18-208ENST00000577751 CBLN1P23435 193 aa14.63□□□□□ -0.07
SS18-208ENST00000577751 ELLP55199 621 aaPredicted RBP14.63□□□□□ -0.07
SS18-208ENST00000577751 DEFB114Q30KQ6 69 aa14.63□□□□□ -0.07
SS18-208ENST00000577751 C2orf83Q53S99 150 aa14.63□□□□□ -0.07
SS18-208ENST00000577751 FNDC4Q9H6D8 234 aaPredicted RBP14.63□□□□□ -0.07
SS18-208ENST00000577751 PALMDQ9NP74 551 aa14.63□□□□□ -0.07
SS18-208ENST00000577751 IZUMO1RA6ND01 250 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 NDUFA4O00483 81 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 NXPH3O95157 252 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 C8orf88P0DMB2 117 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 ANXA7P20073 488 aaKnown RBP14.62□□□□□ -0.07
SS18-208ENST00000577751 DHRS2Q13268 280 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 TM4SF20Q53R12 229 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 LCN12Q6JVE5 192 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 LYG2Q86SG7 212 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 SLC24A4Q8NFF2 622 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 TMEM170AQ8WVE7 144 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 TMEM190Q8WZ59 177 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 HIPK2Q9H2X6 1198 aa14.62□□□□□ -0.07
SS18-208ENST00000577751 TECRQ9NZ01 308 aaKnown RBP14.62□□□□□ -0.07
SS18-208ENST00000577751 NUPL2O15504 423 aaKnown RBP14.61□□□□□ -0.07
SS18-208ENST00000577751 MLANAQ16655 118 aa14.61□□□□□ -0.07
SS18-208ENST00000577751 CD300EQ496F6 205 aaPredicted RBP14.61□□□□□ -0.07
SS18-208ENST00000577751 C11orf87Q6NUJ2 197 aa14.61□□□□□ -0.07
SS18-208ENST00000577751 DUSP18Q8NEJ0 188 aa14.61□□□□□ -0.07
SS18-208ENST00000577751 OR1S1Q8NH92 325 aa14.61□□□□□ -0.07
SS18-208ENST00000577751 CACNG8Q8WXS5 425 aa14.61□□□□□ -0.07
SS18-208ENST00000577751 WDR12Q9GZL7 423 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms