RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CLEC5AQ9NY25 188 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 ANXA10Q9UJ72 324 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 CELA1Q9UNI1 258 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 F11RQ9Y624 299 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 X6R8D5 127 aa7.3□□□□□ -1.24
NPLOC4-220ENST00000576940 IGHV3-66A0A0C4DH42 116 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 LOC100506127A0A0U1RQW1 187 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 DNASE2O00115 360 aaPredicted RBP7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 SSX5O60225 188 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 DFFBO76075 338 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 IGHV3-48P01763 117 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 MIFP14174 115 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 FCGR2CP31995 323 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 RPS19P39019 145 aaKnown RBP7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 RANBP1P43487 201 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 ZNF846Q147U1 533 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 POU2AF1Q16633 256 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 STHQ8IWL8 128 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 CENPSQ8N2Z9 138 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 MCFD2Q8NI22 146 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 ST8SIA2Q92186 375 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 OR10C1Q96KK4 312 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 ATP6V0BQ99437 205 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 NDUFA4L2Q9NRX3 87 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 RABL2AQ9UBK7 228 aaPredicted RBP7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 RABL2BQ9UNT1 228 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 NSG2Q9Y328 171 aa7.29□□□□□ -1.24
NPLOC4-220ENST00000576940 TMEM235A6NFC5 223 aa7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 ZNF705EA8MWA4 302 aaPredicted RBP7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 PDCD5O14737 125 aa7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 RBFOX2O43251 390 aaKnown RBP eCLIP7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 RPL11P62913 178 aaKnown RBP7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 RELQ04864 619 aaPredicted RBP7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 ARL6IP1Q15041 203 aa7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 C22orf42Q6IC83 251 aa7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 CCDC190Q86UF4 302 aa7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 OR1L8Q8NGR8 309 aa7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 NDUFAF3Q9BU61 184 aa7.28□□□□□ -1.24
NPLOC4-220ENST00000576940 SMIM30A4D0T7 59 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 KNCNA6PVL3 124 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 ST8SIA3O43173 380 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 IFNA10P01566 189 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 AMBPP02760 352 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 FCER2P06734 321 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 C4BPBP20851 252 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 SDC2P34741 201 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 PPP5CP53041 499 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 FXYD4P59646 89 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 LSM3P62310 102 aaKnown RBP7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 TOMM20LQ6UXN7 152 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 Q6ZR54 194 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 HSD17B13Q7Z5P4 300 aaPredicted RBP7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 TRPT1Q86TN4 253 aaKnown RBP7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 MAPKAPK5-AS1Q8N8E1 139 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 ZBTB34Q8NCN2 500 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 CSNK1G2-AS1Q8NCQ2 148 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 OR51H1Q8NH63 302 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 LSM10Q969L4 123 aaKnown RBP7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 SLC5A7Q9GZV3 580 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 RABAC1Q9UI14 185 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 OR51B2Q9Y5P1 312 aa7.27□□□□□ -1.25
NPLOC4-220ENST00000576940 DBX1A6NMT0 343 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 NOTOA8MTQ0 251 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 I3L2K1 104 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 PPYP01298 95 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 RAB3BP20337 219 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 MYL9P24844 172 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 S100A5P33763 92 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 TGFBR1P36897 503 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 MFAP4P55083 255 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 GNG2P59768 71 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 CATR1Q13166 79 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 THOC7Q6I9Y2 204 aaKnown RBP7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 ZNF818PQ6ZRF7 136 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 Q6ZRM9 215 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 DUSP18Q8NEJ0 188 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 MISP3Q96FF7 219 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 SOSTQ9BQB4 213 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 CCDC32Q9BV29 185 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 RNF167Q9H6Y7 350 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 VSIRQ9H7M9 311 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 PLEKHA2Q9HB19 425 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 TBC1D24Q9ULP9 559 aa7.26□□□□□ -1.25
NPLOC4-220ENST00000576940 MT-CO2P00403 227 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 KRASP01116 189 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 IFNA21P01568 189 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 IFNA17P01571 189 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 EIF4EP06730 217 aaKnown RBP7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 FGF2P09038 288 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 ARPC4P59998 168 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 MSMO1Q15800 293 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 AADACL3Q5VUY0 350 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 MZT2AQ6P582 158 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 MORN3Q6PF18 240 aaPredicted RBP7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 UBE2DNLQ8IWF7 75 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 BEST4Q8NFU0 473 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 TMEM14BQ9NUH8 114 aa7.25□□□□□ -1.25
NPLOC4-220ENST00000576940 MARCH11A6NNE9 402 aa7.24□□□□□ -1.25
NPLOC4-220ENST00000576940 C16orf90A8MZG2 172 aa7.24□□□□□ -1.25
NPLOC4-220ENST00000576940 GNG7O60262 68 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms