RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FCGR2CP31995 323 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 SDC2P34741 201 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 S100A12P80511 92 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 UBE2UQ5VVX9 321 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 OR4A47Q6IF82 309 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 ZNF773Q6PK81 442 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 UNQ9165/PRO28630Q6UXU0 137 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 RBPMS2Q6ZRY4 209 aaKnown RBP4.65□□□□□ -1.67
NUP88-212ENST00000576708 SLC25A42Q86VD7 318 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 TMEM61Q8N0U2 210 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 UXS1Q8NBZ7 420 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 OR4S2Q8NH73 311 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 SLC25A38Q96DW6 304 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 HSD17B10Q99714 261 aaKnown RBP4.65□□□□□ -1.67
NUP88-212ENST00000576708 DCSTAMPQ9H295 470 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 SLC2A9Q9NRM0 540 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 RHBDL2Q9NX52 303 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 SLC2A8Q9NY64 477 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 ZNF257Q9Y2Q1 563 aa4.65□□□□□ -1.67
NUP88-212ENST00000576708 MRPS7Q9Y2R9 242 aaKnown RBP4.65□□□□□ -1.67
NUP88-212ENST00000576708 TNCP24821 2201 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 IGLV11-55A0A075B6I3 123 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 IGHV3-21A0A0B4J1V1 117 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 LGALS9O00182 355 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 WRBO00258 174 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 CREBL2O60519 120 aaPredicted RBP4.64□□□□□ -1.67
NUP88-212ENST00000576708 SLC22A5O76082 557 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 HLA-GP17693 338 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 TGFBR1P36897 503 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 FXYD4P59646 89 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 OR2B8PP59922 312 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 GABARAPL2P60520 117 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 RAB14P61106 215 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 RPL8P62917 257 aaKnown RBP4.64□□□□□ -1.67
NUP88-212ENST00000576708 ARL6IP1Q15041 203 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 TIMM50Q3ZCQ8 353 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 IDNKQ5T6J7 187 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 SFXN4Q6P4A7 337 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 BTNL8Q6UX41 500 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 SLC51BQ86UW2 128 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 HOGA1Q86XE5 327 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 GPHB5Q86YW7 130 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 LAX1Q8IWV1 398 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 SPAG16Q8N0X2 631 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 BEST4Q8NFU0 473 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 OR10W1Q8NGF6 305 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 OR13F1Q8NGS4 319 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 EEF1AKMT3Q96AZ1 226 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 TM2D2Q9BX73 214 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 HRASLSQ9HDD0 168 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 TECRQ9NZ01 308 aaKnown RBP4.64□□□□□ -1.67
NUP88-212ENST00000576708 RAB26Q9ULW5 256 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 SSR3Q9UNL2 185 aa4.64□□□□□ -1.67
NUP88-212ENST00000576708 IGHV3OR16-8A0A075B7F1 116 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 IGLC7A0M8Q6 106 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 UPK2O00526 184 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 S1PR2O95136 353 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 HRASP01112 189 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 PPYP01298 95 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 DEFA4P12838 97 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 GPR183P32249 361 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 MAS1LP35410 378 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 EWSR1Q01844 656 aaKnown RBP eCLIP4.63□□□□□ -1.67
NUP88-212ENST00000576708 KLK9Q2XQG4 91 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 FAM106AQ4KMX7 169 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 ZNF585BQ52M93 769 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 CST9LP1Q5W188 147 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 ZNF57Q68EA5 555 aaPredicted RBP4.63□□□□□ -1.67
NUP88-212ENST00000576708 ZNF818PQ6ZRF7 136 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 NHLRC2Q8NBF2 726 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 OR52B4Q8NGK2 314 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 OR51H1Q8NH63 302 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 VSTM2AQ8TAG5 236 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 ZNF479Q96JC4 524 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 OVOL2Q9BRP0 275 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 VCX2Q9H322 139 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 AUNIPQ9H7T9 357 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 BET1LQ9NYM9 111 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 UBQLN2Q9UHD9 624 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 KLK9Q9UKQ9 250 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 NSG2Q9Y328 171 aa4.63□□□□□ -1.67
NUP88-212ENST00000576708 TEX50A0A1B0GTY4 177 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 A8MWP6 167 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 ZNF207O43670 478 aaKnown RBP4.62□□□□□ -1.67
NUP88-212ENST00000576708 MRPS14O60783 128 aaKnown RBP4.62□□□□□ -1.67
NUP88-212ENST00000576708 ATP6V1G2O95670 118 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 HIST1H1BP16401 226 aaKnown RBP4.62□□□□□ -1.67
NUP88-212ENST00000576708 S100A1P23297 94 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 MFAP2P55001 183 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 NEDD8Q15843 81 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 SLC16A13Q7RTY0 426 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 TMEM17Q86X19 198 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 OR4A5Q8NH83 315 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 ZNF502Q8TBZ5 544 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 GGTLC1Q9BX51 225 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 HINT2Q9BX68 163 aa4.62□□□□□ -1.67
NUP88-212ENST00000576708 LOC102724200A0A096LPH7 203 aaPredicted RBP4.61□□□□□ -1.67
NUP88-212ENST00000576708 TRBV7-1A0A0A6YYK4 115 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 OR2T8A6NH00 312 aa4.61□□□□□ -1.67
NUP88-212ENST00000576708 CTDSP2O14595 271 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms