RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 CLINT1Q14677 625 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 BSXQ3C1V8 233 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 ETFRF1Q6IPR1 90 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 Q6ZSV7 163 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 ARL6Q9H0F7 186 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 ZNF580Q9UK33 172 aa12.96□□□□□ -0.33
ERCC4-208ENST00000576348 NSD1Q96L73 2696 aaPredicted RBP12.95□□□□□ -0.34
ERCC4-208ENST00000576348 PRH1P02810 166 aa12.95□□□□□ -0.34
ERCC4-208ENST00000576348 CXCL2P19875 107 aa12.95□□□□□ -0.34
ERCC4-208ENST00000576348 EXOSC2Q13868 293 aaKnown RBP12.95□□□□□ -0.34
ERCC4-208ENST00000576348 TMUB2Q71RG4 321 aa12.95□□□□□ -0.34
ERCC4-208ENST00000576348 Q8N2B8 174 aa12.95□□□□□ -0.34
ERCC4-208ENST00000576348 C9orf62Q8N4C0 152 aa12.95□□□□□ -0.34
ERCC4-208ENST00000576348 KCNRGQ8N5I3 272 aa12.95□□□□□ -0.34
ERCC4-208ENST00000576348 OR5C1Q8NGR4 320 aa12.95□□□□□ -0.34
ERCC4-208ENST00000576348 SLC35E1Q96K37 410 aa12.95□□□□□ -0.34
ERCC4-208ENST00000576348 FBXL17Q9UF56 701 aa12.95□□□□□ -0.34
ERCC4-208ENST00000576348 PSMB11A5LHX3 300 aa12.94□□□□□ -0.34
ERCC4-208ENST00000576348 DFFBO76075 338 aa12.94□□□□□ -0.34
ERCC4-208ENST00000576348 PF4V1P10720 104 aa12.94□□□□□ -0.34
ERCC4-208ENST00000576348 ATP6V1FQ16864 119 aa12.94□□□□□ -0.34
ERCC4-208ENST00000576348 LGALSLQ3ZCW2 172 aaPredicted RBP12.94□□□□□ -0.34
ERCC4-208ENST00000576348 CENPVQ7Z7K6 275 aaPredicted RBP12.94□□□□□ -0.34
ERCC4-208ENST00000576348 OR4F5Q8NH21 305 aa12.94□□□□□ -0.34
ERCC4-208ENST00000576348 TMEM170AQ8WVE7 144 aa12.94□□□□□ -0.34
ERCC4-208ENST00000576348 MS4A10Q96PG2 267 aa12.94□□□□□ -0.34
ERCC4-208ENST00000576348 ARPC5LQ9BPX5 153 aa12.94□□□□□ -0.34
ERCC4-208ENST00000576348 TMEM147Q9BVK8 224 aa12.94□□□□□ -0.34
ERCC4-208ENST00000576348 FBXL7Q9UJT9 491 aa12.94□□□□□ -0.34
ERCC4-208ENST00000576348 BORCS7-ASMTA0A0B4J1R7 106 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 H3BUA1 57 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 TAAR5O14804 337 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 BCL2L11O43521 198 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 OR2J3O76001 311 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 IFNA5P01569 189 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 TRGV3P03979 118 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 GPX4P36969 197 aaPredicted RBP12.93□□□□□ -0.34
ERCC4-208ENST00000576348 DLK1P80370 383 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 AKR1C1Q04828 323 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 SLC16A13Q7RTY0 426 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 ATP5SQ99766 215 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 UQCC1Q9NVA1 299 aa12.93□□□□□ -0.34
ERCC4-208ENST00000576348 FN1P02751 2386 aaKnown RBP12.93□□□□□ -0.34
ERCC4-208ENST00000576348 ZNF469Q96JG9 3925 aaPredicted RBP12.92□□□□□ -0.34
ERCC4-208ENST00000576348 IGLV11-55A0A075B6I3 123 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 IGHV3-21A0A0B4J1V1 117 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 NDUFA7O95182 113 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 MFAP2P55001 183 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 TPPP2P59282 170 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 RHOGP84095 191 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 CD69Q07108 199 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 ARL16Q0P5N6 197 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 C19orf54Q5BKX5 351 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 ZNF329Q86UD4 541 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 HAPLN4Q86UW8 402 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 NECAP1Q8NC96 275 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 CACNG8Q8WXS5 425 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 BSCL2Q96G97 398 aaPredicted RBP12.92□□□□□ -0.34
ERCC4-208ENST00000576348 GGACTQ9BVM4 153 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 SLA2Q9H6Q3 261 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 TNCP24821 2201 aa12.92□□□□□ -0.34
ERCC4-208ENST00000576348 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 PMS2P5A8MQ11 134 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 MT-CO2P00403 227 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 SRSF2Q01130 221 aaKnown RBP12.91□□□□□ -0.34
ERCC4-208ENST00000576348 ATP5G2Q06055 141 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 ZNF266Q14584 549 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 OPCMLQ14982 345 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 ACSM6Q6P461 480 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 TEX38Q6PEX7 206 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 SCGB1C1Q8TD33 95 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 TAF15Q92804 592 aaKnown RBP eCLIP12.91□□□□□ -0.34
ERCC4-208ENST00000576348 ACY3Q96HD9 319 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 ZNF471Q9BX82 626 aaPredicted RBP12.91□□□□□ -0.34
ERCC4-208ENST00000576348 C16orf95Q9H693 158 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 SERTAD4Q9NUC0 356 aa12.91□□□□□ -0.34
ERCC4-208ENST00000576348 TMEM89A2RUT3 159 aa12.9□□□□□ -0.34
ERCC4-208ENST00000576348 FAM223BA6NKX1 122 aa12.9□□□□□ -0.34
ERCC4-208ENST00000576348 SOX15O60248 233 aa12.9□□□□□ -0.34
ERCC4-208ENST00000576348 SCGB2A1O75556 95 aa12.9□□□□□ -0.34
ERCC4-208ENST00000576348 NDUFB8O95169 186 aa12.9□□□□□ -0.34
ERCC4-208ENST00000576348 PPIFP30405 207 aaKnown RBP12.9□□□□□ -0.34
ERCC4-208ENST00000576348 EIF5AP63241 154 aaKnown RBP12.9□□□□□ -0.34
ERCC4-208ENST00000576348 PVRIGQ6DKI7 326 aa12.9□□□□□ -0.34
ERCC4-208ENST00000576348 LAMTOR1Q6IAA8 161 aa12.9□□□□□ -0.34
ERCC4-208ENST00000576348 FAM223AQ8IWN6 122 aa12.9□□□□□ -0.34
ERCC4-208ENST00000576348 FANCD2OSQ96PS1 177 aa12.9□□□□□ -0.34
ERCC4-208ENST00000576348 DMRT1Q9Y5R6 373 aa12.9□□□□□ -0.34
ERCC4-208ENST00000576348 A0A0G2JLM5 398 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 IGHV3-48P01763 117 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 IGHG4P01861 327 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 DEFA5Q01523 94 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 CFHR3Q02985 330 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 FOXE3Q13461 319 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 C15orf32Q32M92 178 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 Q56UQ5 140 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 COMMD1Q8N668 190 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 UBAC2Q8NBM4 344 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 OR4X2Q8NGF9 303 aa12.89□□□□□ -0.35
ERCC4-208ENST00000576348 EEF1AKMT3Q96AZ1 226 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms