RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 OR1P1Q8NH06 330 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 PINX1Q96BK5 328 aaKnown RBP11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 MOB3AQ96BX8 217 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 GRAMD2BQ96HH9 432 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 TMEM56Q96MV1 263 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 RAB40CQ96S21 281 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 SLC5A7Q9GZV3 580 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 TMEM231Q9H6L2 316 aa11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 PUS1Q9Y606 427 aaKnown RBP eCLIP11.57□□□□□ -0.56
CTDNEP1-211ENST00000575783 TMEM235A6NFC5 223 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 IFITM5A6NNB3 132 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 SNAPC5O75971 98 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 FXYD4P59646 89 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 ARPC4P59998 168 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 TRAM1Q15629 374 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 MSMO1Q15800 293 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 AADACL3Q5VUY0 350 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 C1QTNF4Q9BXJ3 329 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 AGRNO00468 2067 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 MYCBP2O75592 4640 aa11.56□□□□□ -0.56
CTDNEP1-211ENST00000575783 FAT1Q14517 4588 aa11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 MARCH11A6NNE9 402 aa11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 PDCD5O14737 125 aa11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 KRASP01116 189 aa11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 NPPCP23582 126 aa11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 PSMA1P25786 263 aaKnown RBP11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 GNG2P59768 71 aa11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 NUTF2P61970 127 aaKnown RBP11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 ATG101Q9BSB4 218 aa11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 YTHDF1Q9BYJ9 559 aaKnown RBP11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 COMMD9Q9P000 198 aa11.55□□□□□ -0.56
CTDNEP1-211ENST00000575783 SRRM2Q9UQ35 2752 aaKnown RBP11.54□□□□□ -0.56
CTDNEP1-211ENST00000575783 NBDYA0A0U1RRE5 68 aa11.54□□□□□ -0.56
CTDNEP1-211ENST00000575783 A0A1W2PS18 150 aa11.54□□□□□ -0.56
CTDNEP1-211ENST00000575783 SSX5O60225 188 aa11.54□□□□□ -0.56
CTDNEP1-211ENST00000575783 PPYP01298 95 aa11.54□□□□□ -0.56
CTDNEP1-211ENST00000575783 PSMG4Q5JS54 123 aa11.54□□□□□ -0.56
CTDNEP1-211ENST00000575783 TMEM88Q6PEY1 159 aa11.54□□□□□ -0.56
CTDNEP1-211ENST00000575783 ZNF818PQ6ZRF7 136 aa11.54□□□□□ -0.56
CTDNEP1-211ENST00000575783 NIPSNAP3BQ9BS92 247 aa11.54□□□□□ -0.56
CTDNEP1-211ENST00000575783 ZFAND3Q9H8U3 227 aa11.54□□□□□ -0.56
CTDNEP1-211ENST00000575783 IGHV3OR16-12A0A075B7B8 117 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 A0A1B0GU03 582 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 TMEM189A5PLL7 270 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 DBX1A6NMT0 343 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 G6PCP35575 357 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 FAM222AQ5U5X8 452 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 ZNF600Q6ZNG1 722 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 TPRA1Q86W33 373 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 DCANP1Q8TF63 244 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 CCDC90BQ9GZT6 254 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 DKK2Q9UBU2 259 aa11.53□□□□□ -0.56
CTDNEP1-211ENST00000575783 LPAR6P43657 344 aa11.52□□□□□ -0.57
CTDNEP1-211ENST00000575783 P2RY1P47900 373 aa11.52□□□□□ -0.57
CTDNEP1-211ENST00000575783 FAM3BP58499 235 aaPredicted RBP11.52□□□□□ -0.57
CTDNEP1-211ENST00000575783 DHRS2Q13268 280 aa11.52□□□□□ -0.57
CTDNEP1-211ENST00000575783 TMEM17Q86X19 198 aa11.52□□□□□ -0.57
CTDNEP1-211ENST00000575783 ACOT13Q9NPJ3 140 aa11.52□□□□□ -0.57
CTDNEP1-211ENST00000575783 PRNDQ9UKY0 176 aa11.52□□□□□ -0.57
CTDNEP1-211ENST00000575783 HELTA6NFD8 242 aa11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 CASQ2O14958 399 aaPredicted RBP11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 FCER2P06734 321 aa11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 FGF9P31371 208 aaPredicted RBP11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 NPBWR1P48145 328 aa11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 BEST4Q8NFU0 473 aa11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 TSPAN14Q8NG11 270 aa11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 METTL26Q96S19 204 aa11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 NEU1Q99519 415 aa11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 FKBP11Q9NYL4 201 aa11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 UBR4Q5T4S7 5183 aa11.51□□□□□ -0.57
CTDNEP1-211ENST00000575783 TRAV1-2A0A0B4J238 106 aa11.5□□□□□ -0.57
CTDNEP1-211ENST00000575783 RAB3BP20337 219 aa11.5□□□□□ -0.57
CTDNEP1-211ENST00000575783 F2RP25116 425 aa11.5□□□□□ -0.57
CTDNEP1-211ENST00000575783 PPP5CP53041 499 aa11.5□□□□□ -0.57
CTDNEP1-211ENST00000575783 ZNF705AQ6ZN79 300 aaPredicted RBP11.5□□□□□ -0.57
CTDNEP1-211ENST00000575783 FCAMRQ8WWV6 532 aa11.5□□□□□ -0.57
CTDNEP1-211ENST00000575783 RFNGQ9Y644 331 aa11.5□□□□□ -0.57
CTDNEP1-211ENST00000575783 TEX48A0A1B0GUV7 120 aa11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 SMIM30A4D0T7 59 aa11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 SMIM9A6NGZ8 99 aa11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 TMEM50AO95807 157 aa11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 RLN1P04808 185 aa11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 ZNF705DP0CH99 300 aaPredicted RBP11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 ZNF705BP0CI00 300 aaPredicted RBP11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 FXYD7P58549 80 aa11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 KRTAP10-2P60368 255 aa11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 MLLT11Q13015 90 aaPredicted RBP11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 PACRGLQ8N7B6 248 aa11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 NARS2Q96I59 477 aaKnown RBP11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 SCN3BQ9NY72 215 aa11.49□□□□□ -0.57
CTDNEP1-211ENST00000575783 NACAE9PAV3 2078 aa11.48□□□□□ -0.57
CTDNEP1-211ENST00000575783 H3BMM0 161 aa11.48□□□□□ -0.57
CTDNEP1-211ENST00000575783 MYL9P24844 172 aa11.48□□□□□ -0.57
CTDNEP1-211ENST00000575783 CRYBB3P26998 211 aa11.48□□□□□ -0.57
CTDNEP1-211ENST00000575783 GNRHRP30968 328 aa11.48□□□□□ -0.57
CTDNEP1-211ENST00000575783 ZNRF2Q8NHG8 242 aa11.48□□□□□ -0.57
CTDNEP1-211ENST00000575783 PGLYRP1O75594 196 aaPredicted RBP11.47□□□□□ -0.57
CTDNEP1-211ENST00000575783 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
CTDNEP1-211ENST00000575783 EIF2B2P49770 351 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms