RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 SPCS3P61009 180 aa10.35□□□□□ -0.75
CIITA-210ENST00000575513 IZUMO4Q1ZYL8 232 aa10.35□□□□□ -0.75
CIITA-210ENST00000575513 ANKRD55Q3KP44 614 aa10.35□□□□□ -0.75
CIITA-210ENST00000575513 DEFB121Q5J5C9 76 aa10.35□□□□□ -0.75
CIITA-210ENST00000575513 SPSB3Q6PJ21 355 aa10.35□□□□□ -0.75
CIITA-210ENST00000575513 Q6ZRM9 215 aa10.35□□□□□ -0.75
CIITA-210ENST00000575513 SLC35G3Q8N808 338 aa10.35□□□□□ -0.75
CIITA-210ENST00000575513 GPR146Q96CH1 333 aa10.35□□□□□ -0.75
CIITA-210ENST00000575513 C20orf85Q9H1P6 137 aa10.35□□□□□ -0.75
CIITA-210ENST00000575513 GAR1Q9NY12 217 aaKnown RBP10.35□□□□□ -0.75
CIITA-210ENST00000575513 LSM4Q9Y4Z0 139 aaKnown RBP10.35□□□□□ -0.75
CIITA-210ENST00000575513 K7EIM0 57 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 IGHV3-23P01764 117 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 OR4E1P0C645 316 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 ANXA7P20073 488 aaKnown RBP10.34□□□□□ -0.75
CIITA-210ENST00000575513 FCGR2BP31994 310 aaPredicted RBP10.34□□□□□ -0.75
CIITA-210ENST00000575513 SUB1P53999 127 aaKnown RBP eCLIP10.34□□□□□ -0.75
CIITA-210ENST00000575513 NMSQ5H8A3 153 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 PVRIGQ6DKI7 326 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 LYZL2Q7Z4W2 148 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 LYG2Q86SG7 212 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 OR2K2Q8NGT1 345 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 SCARB1Q8WTV0 552 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 BSCL2Q96G97 398 aaPredicted RBP10.34□□□□□ -0.75
CIITA-210ENST00000575513 TXN2Q99757 166 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 C21orf62Q9NYP8 219 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 PRR13Q9NZ81 148 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 CACNG5Q9UF02 275 aa10.34□□□□□ -0.75
CIITA-210ENST00000575513 SORL1Q92673 2214 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 A8MWP6 167 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 TGOLN2O43493 480 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 HLA-AP01891 365 aaKnown RBP10.33□□□□□ -0.76
CIITA-210ENST00000575513 SULT1A3P0DMM9 295 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 SULT1A4P0DMN0 295 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 SLC25A6P12236 298 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 SPNP16150 400 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 SNCAP37840 140 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 DEFA1P59665 94 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 DEFA3P59666 94 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 DHRS2Q13268 280 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 PLET1Q6UQ28 207 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 DUSP18Q8NEJ0 188 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 PRR25Q96S07 402 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 ENY2Q9NPA8 101 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 NUDT15Q9NV35 164 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 S4R3C0 116 aa10.33□□□□□ -0.76
CIITA-210ENST00000575513 A0A1B0GU03 582 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 I3L2K1 104 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 CORTO00230 105 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 H2AFB2P0C5Z0 115 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 GP9P14770 177 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 GPR183P32249 361 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 ELLP55199 621 aaPredicted RBP10.32□□□□□ -0.76
CIITA-210ENST00000575513 C4orf46Q504U0 113 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 COQ8AQ8NI60 647 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 ENKURQ8TC29 256 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 ZNF436Q9C0F3 470 aaPredicted RBP10.32□□□□□ -0.76
CIITA-210ENST00000575513 PALMDQ9NP74 551 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 TECRQ9NZ01 308 aaKnown RBP10.32□□□□□ -0.76
CIITA-210ENST00000575513 TMED3Q9Y3Q3 217 aa10.32□□□□□ -0.76
CIITA-210ENST00000575513 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
CIITA-210ENST00000575513 F8W735 103 aaPredicted RBP10.31□□□□□ -0.76
CIITA-210ENST00000575513 LY86O95711 162 aa10.31□□□□□ -0.76
CIITA-210ENST00000575513 HOXA1P49639 335 aaPredicted RBP10.31□□□□□ -0.76
CIITA-210ENST00000575513 MFAP4P55083 255 aa10.31□□□□□ -0.76
CIITA-210ENST00000575513 SMCO1Q147U7 214 aa10.31□□□□□ -0.76
CIITA-210ENST00000575513 BSXQ3C1V8 233 aa10.31□□□□□ -0.76
CIITA-210ENST00000575513 LCN12Q6JVE5 192 aa10.31□□□□□ -0.76
CIITA-210ENST00000575513 MITD1Q8WV92 249 aa10.31□□□□□ -0.76
CIITA-210ENST00000575513 MARC2Q969Z3 335 aa10.31□□□□□ -0.76
CIITA-210ENST00000575513 B9D2Q9BPU9 175 aa10.31□□□□□ -0.76
CIITA-210ENST00000575513 TRAV6A0A075B6T7 132 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 ZNF320A2RRD8 509 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 OR2T8A6NH00 312 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 NDUFA4O00483 81 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 PITX3O75364 302 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 MT-CO2P00403 227 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 IL5P05113 134 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 CTSGP08311 255 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 C8orf88P0DMB2 117 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 RNASE2P10153 161 aaKnown RBP10.3□□□□□ -0.76
CIITA-210ENST00000575513 FOLR2P14207 255 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 CBLN1P23435 193 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 HTR2BP41595 481 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 SPINK9Q5DT21 86 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 ADAMTSL5Q6ZMM2 481 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 NRARPQ7Z6K4 114 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 MISP3Q96FF7 219 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 UFC1Q9Y3C8 167 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 SMAD5-AS1Q9Y6J3 95 aa10.3□□□□□ -0.76
CIITA-210ENST00000575513 TMEM213A2RRL7 107 aa10.29□□□□□ -0.76
CIITA-210ENST00000575513 ADMP35318 185 aa10.29□□□□□ -0.76
CIITA-210ENST00000575513 ATP5IP56385 69 aaPredicted RBP10.29□□□□□ -0.76
CIITA-210ENST00000575513 RELQ04864 619 aaPredicted RBP10.29□□□□□ -0.76
CIITA-210ENST00000575513 DEFB114Q30KQ6 69 aa10.29□□□□□ -0.76
CIITA-210ENST00000575513 Q56UQ5 140 aa10.29□□□□□ -0.76
CIITA-210ENST00000575513 GGNBP1Q5YKI7 109 aa10.29□□□□□ -0.76
CIITA-210ENST00000575513 NOXA1Q86UR1 476 aa10.29□□□□□ -0.76
CIITA-210ENST00000575513 ZNF431Q8TF32 576 aaPredicted RBP10.29□□□□□ -0.76
CIITA-210ENST00000575513 HIPK2Q9H2X6 1198 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms