RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 IZUMO4Q1ZYL8 232 aa11.2□□□□□ -0.62
CTNS-209ENST00000574776 SPINK9Q5DT21 86 aa11.2□□□□□ -0.62
CTNS-209ENST00000574776 FAM90A2PQ658T7 463 aa11.2□□□□□ -0.62
CTNS-209ENST00000574776 MRGPRFQ96AM1 343 aa11.2□□□□□ -0.62
CTNS-209ENST00000574776 CMTM3Q96MX0 182 aa11.2□□□□□ -0.62
CTNS-209ENST00000574776 SCPEP1Q9HB40 452 aa11.2□□□□□ -0.62
CTNS-209ENST00000574776 A0A087WXM4 84 aa11.19□□□□□ -0.62
CTNS-209ENST00000574776 APOA1P02647 267 aa11.19□□□□□ -0.62
CTNS-209ENST00000574776 LILRB2Q8N423 598 aa11.19□□□□□ -0.62
CTNS-209ENST00000574776 ZNF114Q8NC26 417 aa11.19□□□□□ -0.62
CTNS-209ENST00000574776 PHLDA1Q8WV24 401 aaPredicted RBP11.19□□□□□ -0.62
CTNS-209ENST00000574776 RARRES2Q99969 163 aa11.19□□□□□ -0.62
CTNS-209ENST00000574776 M0QYG6 137 aa11.18□□□□□ -0.62
CTNS-209ENST00000574776 APOHP02749 345 aaPredicted RBP11.18□□□□□ -0.62
CTNS-209ENST00000574776 ELK1P19419 428 aa11.18□□□□□ -0.62
CTNS-209ENST00000574776 RCVRNP35243 200 aa11.18□□□□□ -0.62
CTNS-209ENST00000574776 NCS1P62166 190 aa11.18□□□□□ -0.62
CTNS-209ENST00000574776 PAFAH1B2P68402 229 aa11.18□□□□□ -0.62
CTNS-209ENST00000574776 TOMM20LQ6UXN7 152 aa11.18□□□□□ -0.62
CTNS-209ENST00000574776 TCF24Q7RTU0 167 aa11.18□□□□□ -0.62
CTNS-209ENST00000574776 VCX3AQ9NNX9 186 aa11.18□□□□□ -0.62
CTNS-209ENST00000574776 IGHV3-66A0A0C4DH42 116 aa11.17□□□□□ -0.62
CTNS-209ENST00000574776 HPGDSO60760 199 aa11.17□□□□□ -0.62
CTNS-209ENST00000574776 PI3P19957 117 aa11.17□□□□□ -0.62
CTNS-209ENST00000574776 VBP1P61758 197 aa11.17□□□□□ -0.62
CTNS-209ENST00000574776 RPP25LQ8N5L8 163 aaKnown RBP11.17□□□□□ -0.62
CTNS-209ENST00000574776 DUSP18Q8NEJ0 188 aa11.17□□□□□ -0.62
CTNS-209ENST00000574776 OR11H2Q8NH07 326 aa11.17□□□□□ -0.62
CTNS-209ENST00000574776 ST8SIA2Q92186 375 aa11.17□□□□□ -0.62
CTNS-209ENST00000574776 GINS3Q9BRX5 216 aa11.17□□□□□ -0.62
CTNS-209ENST00000574776 A0A0B4J293 547 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 ST8SIA3O43173 380 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 DFFBO76075 338 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 TMEM50AO95807 157 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 IGKV1-5P01602 117 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 PGAM2P15259 253 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 SNCAP37840 140 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 NPBWR1P48145 328 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 RPL11P62913 178 aaKnown RBP11.16□□□□□ -0.62
CTNS-209ENST00000574776 RNASE12Q5GAN4 147 aaKnown RBP11.16□□□□□ -0.62
CTNS-209ENST00000574776 GATAD1Q8WUU5 269 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 FUNDC2Q9BWH2 189 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 PUS1Q9Y606 427 aaKnown RBP eCLIP11.16□□□□□ -0.62
CTNS-209ENST00000574776 KMT2AQ03164 3969 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 FRAS1Q86XX4 4008 aa11.16□□□□□ -0.62
CTNS-209ENST00000574776 DNASE2O00115 360 aaPredicted RBP11.15□□□□□ -0.62
CTNS-209ENST00000574776 IFNA17P01571 189 aa11.15□□□□□ -0.62
CTNS-209ENST00000574776 ETV6P41212 452 aa11.15□□□□□ -0.62
CTNS-209ENST00000574776 PIGPP57054 158 aa11.15□□□□□ -0.62
CTNS-209ENST00000574776 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
CTNS-209ENST00000574776 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
CTNS-209ENST00000574776 C11orf45Q8TAV5 145 aa11.15□□□□□ -0.62
CTNS-209ENST00000574776 TP53RKQ96S44 253 aa11.15□□□□□ -0.62
CTNS-209ENST00000574776 MS4A6AQ9H2W1 248 aa11.15□□□□□ -0.62
CTNS-209ENST00000574776 VSIRQ9H7M9 311 aa11.15□□□□□ -0.62
CTNS-209ENST00000574776 KLK11Q9UBX7 282 aa11.15□□□□□ -0.62
CTNS-209ENST00000574776 FAM25AB3EWG3 89 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 FAM25CB3EWG5 89 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 FAM25GB3EWG6 89 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 DEFB4AO15263 64 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 DEDDO75618 318 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 TNFAIP8O95379 198 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 CD5P06127 495 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 DEFB131AP59861 70 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 RND3P61587 244 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 MLANAQ16655 118 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 LEMD1Q68G75 181 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 SLC35G3Q8N808 338 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 ZFAND3Q9H8U3 227 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 FBXL17Q9UF56 701 aa11.14□□□□□ -0.63
CTNS-209ENST00000574776 C3orf85A0A1B0GTC6 90 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 A0A1B0GU03 582 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 CA1P00915 261 aaPredicted RBP11.13□□□□□ -0.63
CTNS-209ENST00000574776 CD3DP04234 171 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 P0C879 139 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 RORCP51449 518 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 AKR1C2P52895 323 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 SUB1P53999 127 aaKnown RBP eCLIP11.13□□□□□ -0.63
CTNS-209ENST00000574776 SP6Q3SY56 376 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 RNASE10Q5GAN6 216 aaKnown RBP11.13□□□□□ -0.63
CTNS-209ENST00000574776 LGALS9CQ6DKI2 356 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 LHFPL1Q86WI0 220 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 FAM24BQ8N5W8 94 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 OR52I2Q8NH67 350 aa11.13□□□□□ -0.63
CTNS-209ENST00000574776 ZNF486Q96H40 463 aaPredicted RBP11.13□□□□□ -0.63
CTNS-209ENST00000574776 MRPL36Q9P0J6 103 aaKnown RBP11.13□□□□□ -0.63
CTNS-209ENST00000574776 INS-IGF2F8WCM5 200 aa11.12□□□□□ -0.63
CTNS-209ENST00000574776 IFNA4P05014 189 aa11.12□□□□□ -0.63
CTNS-209ENST00000574776 RNASE2P10153 161 aaKnown RBP11.12□□□□□ -0.63
CTNS-209ENST00000574776 NPPCP23582 126 aa11.12□□□□□ -0.63
CTNS-209ENST00000574776 TMEM187Q14656 261 aa11.12□□□□□ -0.63
CTNS-209ENST00000574776 RBMS2Q15434 407 aaKnown RBP11.12□□□□□ -0.63
CTNS-209ENST00000574776 PVRIGQ6DKI7 326 aa11.12□□□□□ -0.63
CTNS-209ENST00000574776 MZT2AQ6P582 158 aa11.12□□□□□ -0.63
CTNS-209ENST00000574776 PDCD10Q9BUL8 212 aa11.12□□□□□ -0.63
CTNS-209ENST00000574776 MFFQ9GZY8 342 aa11.12□□□□□ -0.63
CTNS-209ENST00000574776 RABAC1Q9UI14 185 aa11.12□□□□□ -0.63
CTNS-209ENST00000574776 AGRNO00468 2067 aa11.12□□□□□ -0.63
CTNS-209ENST00000574776 ATG12O94817 140 aa11.11□□□□□ -0.63
CTNS-209ENST00000574776 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms