RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 RNF5Q99942 180 aa7.5□□□□□ -1.21
NPLOC4-216ENST00000574344 TOLLIPQ9H0E2 274 aa7.5□□□□□ -1.21
NPLOC4-216ENST00000574344 ZNF355PQ9NSJ1 428 aa7.5□□□□□ -1.21
NPLOC4-216ENST00000574344 FAM212BQ9NTI7 297 aaPredicted RBP7.5□□□□□ -1.21
NPLOC4-216ENST00000574344 ZNF256Q9Y2P7 627 aaPredicted RBP7.5□□□□□ -1.21
NPLOC4-216ENST00000574344 MSGN1A6NI15 193 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 KRBOX1C9JBD0 128 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 LINC01619G3V211 115 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 SOX15O60248 233 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 PITX3O75364 302 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 SAP30O75446 220 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 MED6O75586 246 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 SCAF4O95104 1147 aaKnown RBP7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 CNIH1O95406 144 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 LGALS1P09382 135 aaKnown RBP7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 KIR2DS2P43631 304 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 SLURP1P55000 103 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 LINC00205P59089 165 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 RTL8BQ17RB0 113 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 NMSQ5H8A3 153 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 ZNF66Q6ZN08 573 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 OR2C3Q8N628 320 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 UBAC2Q8NBM4 344 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 CD300LFQ8TDQ1 290 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 PCNPQ8WW12 178 aaKnown RBP7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 TCTEX1D2Q8WW35 142 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 TMED6Q8WW62 240 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 CXorf58Q96LI9 332 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 RAB40CQ96S21 281 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 HSD17B10Q99714 261 aaKnown RBP7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 TPSG1Q9NRR2 321 aa7.49□□□□□ -1.21
NPLOC4-216ENST00000574344 IGHV4OR15-8A0A075B7B6 117 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 A0A087WW49 117 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 MFSD2BA6NFX1 497 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 ZNF705EA8MWA4 302 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 FAM90A26D6RGX4 464 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 TEX46H3BTG2 121 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 SHOXO15266 292 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 PROP1O75360 226 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 DFFBO76075 338 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 TRGV3P03979 118 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 INSL3P51460 131 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 BLOC1S1P78537 153 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 EWSR1Q01844 656 aaKnown RBP eCLIP7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 KIAA0141Q14154 515 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 FXYD3Q14802 87 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 AKIRIN2Q53H80 203 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 C19orf54Q5BKX5 351 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 FAM74A1Q5RGS3 127 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 ASPHD1Q5U4P2 390 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 UQCC3Q6UW78 93 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 ZNF562Q6V9R5 426 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 SAT2Q96F10 170 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 SMIM3Q9BZL3 60 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 LYRM2Q9NU23 88 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 CACFD1Q9UGQ2 172 aa7.48□□□□□ -1.21
NPLOC4-216ENST00000574344 EGR2P11161 476 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 LGALS7P47929 136 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 RAB5CP51148 216 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 ERVK-16P61578 105 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 HBG1P69891 147 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 HBG2P69892 147 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 TAGLNQ01995 201 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 VMA21Q3ZAQ7 101 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 RPL7L1Q6DKI1 246 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 SLC25A24Q6NUK1 477 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 IL34Q6ZMJ4 242 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 ZNF429Q86V71 674 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 EIF4E3Q8N5X7 224 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 OR5T1Q8NG75 326 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 DLX4Q92988 240 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 CYTL1Q9NRR1 136 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 COA4Q9NYJ1 87 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 CACNG5Q9UF02 275 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 PRELID3BQ9Y3B1 194 aa7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 STRAPQ9Y3F4 350 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-216ENST00000574344 TNCP24821 2201 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 RAB19A4D1S5 217 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 CRYZL1O95825 349 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 HSPB1P04792 205 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 SEC11BP0C7V7 166 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 APELAP0DMC3 54 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 POLR2GP62487 172 aaKnown RBP eCLIP7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 PJVKQ0ZLH3 352 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 TNXAQ16473 311 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 SPAG16Q8N0X2 631 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 OR1S2Q8NGQ3 325 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 GNPNAT1Q96EK6 184 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 C5orf30Q96GV9 206 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 NARS2Q96I59 477 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 ADTRPQ96IZ2 230 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 WWC2-AS2Q96NR7 200 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 OR4C12Q96R67 309 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 ASCL2Q99929 193 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 MAGT1Q9H0U3 335 aa7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 LSM4Q9Y4Z0 139 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-216ENST00000574344 A0A0G2JLM5 398 aa7.45□□□□□ -1.22
NPLOC4-216ENST00000574344 H3BUA1 57 aa7.45□□□□□ -1.22
NPLOC4-216ENST00000574344 SYNGR2O43760 224 aa7.45□□□□□ -1.22
NPLOC4-216ENST00000574344 RBMXL2O75526 392 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms