RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 GATA2P23769 480 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 RAG2P55895 527 aa13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 RPP21Q9H633 154 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 MAST2Q6P0Q8 1798 aa13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 H0Y980 276 aa13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 HIGD1CA8MV81 97 aa13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 MSGN1A6NI15 193 aa13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 C2orf82Q6UX34 121 aa13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 DMRTC2Q8IXT2 367 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 OSR1Q8TAX0 266 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 KCNE1BA0A087WTH5 132 aa13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 TRAV13-1A0A0B4J241 112 aa13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 TRAV40A0A0B4J280 105 aa13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 DUSP15Q9H1R2 295 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-202ENST00000573710 HOXD4P09016 255 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 TBR1Q16650 682 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 ORMDL3Q8N138 153 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 NBEAP1P0C6P0 100 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 TMEM174Q8WUU8 243 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 A0A1B0GUT8 65 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 NPIPB13A6NJU9 1138 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 NPIPB5A8MRT5 1133 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 GATA4P43694 442 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 FOXL1Q12952 345 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 ZNF345Q14585 488 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 DTX4Q9Y2E6 619 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 CXorf51AA0A1B0GTR3 108 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 DEFB130BP0DP73 79 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 DEFB130AP0DP74 79 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 GGACTQ9BVM4 153 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 RNASE7Q9H1E1 156 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 DDX60LQ5H9U9 1706 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 PTPRDP23468 1912 aa13.42□□□□□ -0.26
CACNA1A-202ENST00000573710 HSPE1P61604 102 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 CLPSL2Q6UWE3 100 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 A8MXK9 166 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 C22orf46C9J442 243 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 GCM2O75603 506 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 DRAM1Q8N682 238 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 DLL3Q9NYJ7 618 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 F8VVB4 439 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 F8VWA3 439 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 VN1R4Q7Z5H5 301 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 RCHY1Q96PM5 261 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 PRDM6Q9NQX0 595 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 TRAV9-2A0A087WT02 112 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 LYNX1G3V0Z9 82 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 LYNX1P0DP58 116 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 SERF2P84101 59 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 ACTL10Q5JWF8 245 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 EFEMP2O95967 443 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 Q9H3A6 140 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 NRAPQ86VF7 1730 aa13.41□□□□□ -0.26
CACNA1A-202ENST00000573710 NKAPP1Q8N9T2 125 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 IGFBP2P18065 325 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 MPTX1A8MV57 137 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 TMEM54Q969K7 222 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 C1orf159Q96HA4 380 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 XAF1Q6GPH4 301 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 TRBV5-4A0A0C4DH59 114 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 PTP4A3O75365 173 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 HAMPP81172 84 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 SLC50A1Q9BRV3 221 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 TRAV14DV4A0A0A6YYC5 116 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 DPM2O94777 84 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 PAX1P15863 534 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 ZNF721Q8TF20 911 aa13.4□□□□□ -0.26
CACNA1A-202ENST00000573710 SHANK1Q9Y566 2161 aa13.4□□□□□ -0.27
CACNA1A-202ENST00000573710 SLIRPQ9GZT3 109 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 CD5P06127 495 aa13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 NDUFAF3Q9BU61 184 aa13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 RSPO3Q9BXY4 272 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 IMMP1LQ96LU5 166 aa13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 SAMD5Q5TGI4 173 aa13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 PRR14LQ5THK1 2151 aa13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 EML6Q6ZMW3 1958 aa13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 IGHV4-4A0A075B6R2 117 aa13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 ZCCHC24Q8N2G6 241 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 IFNL4K9M1U5 179 aa13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 CA11O75493 328 aa13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 GAGE13Q4V321 117 aa13.39□□□□□ -0.27
CACNA1A-202ENST00000573710 IGHV4-28A0A0C4DH34 117 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 GCHFRP30047 84 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 ERCC8Q13216 396 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 ZNF146Q15072 292 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 TCF19Q9Y242 345 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 CISD3P0C7P0 127 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 MYOD1P15172 320 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 ZNF561-AS1K7EIQ3 104 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 LEPROTO15243 131 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 IGHG3P01860 377 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 C1QTNF12Q5T7M4 302 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 MORN3Q6PF18 240 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 ABHD17AQ96GS6 310 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 MGST2Q99735 147 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 ATAD5Q96QE3 1844 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 SP9P0CG40 484 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 FGF9P31371 208 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 NR2C2APQ86WQ0 139 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 FAM110DQ8TAY7 271 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms