RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 AGRNO00468 2067 aa14.32□□□□□ -0.12
CCDC40-206ENST00000572083 DEFB131BA0A096LNP1 70 aa14.32□□□□□ -0.12
CCDC40-206ENST00000572083 GNG7O60262 68 aa14.32□□□□□ -0.12
CCDC40-206ENST00000572083 MT-CO2P00403 227 aa14.32□□□□□ -0.12
CCDC40-206ENST00000572083 F2RP25116 425 aa14.32□□□□□ -0.12
CCDC40-206ENST00000572083 GNRHRP30968 328 aa14.32□□□□□ -0.12
CCDC40-206ENST00000572083 LPAR6P43657 344 aa14.32□□□□□ -0.12
CCDC40-206ENST00000572083 HERV-K104P61576 105 aa14.32□□□□□ -0.12
CCDC40-206ENST00000572083 TOMM20LQ6UXN7 152 aa14.32□□□□□ -0.12
CCDC40-206ENST00000572083 TXN2Q99757 166 aa14.32□□□□□ -0.12
CCDC40-206ENST00000572083 TRAV18A0A075B6X5 111 aa14.31□□□□□ -0.12
CCDC40-206ENST00000572083 KNCNA6PVL3 124 aa14.31□□□□□ -0.12
CCDC40-206ENST00000572083 C12orf74Q32Q52 190 aa14.31□□□□□ -0.12
CCDC40-206ENST00000572083 TMEM41BQ5BJD5 291 aa14.31□□□□□ -0.12
CCDC40-206ENST00000572083 PINX1Q96BK5 328 aaKnown RBP14.31□□□□□ -0.12
CCDC40-206ENST00000572083 PRNDQ9UKY0 176 aa14.31□□□□□ -0.12
CCDC40-206ENST00000572083 TBC1D24Q9ULP9 559 aa14.31□□□□□ -0.12
CCDC40-206ENST00000572083 RRP15Q9Y3B9 282 aaKnown RBP14.31□□□□□ -0.12
CCDC40-206ENST00000572083 TRAV2A0A0B4J234 112 aa14.3□□□□□ -0.12
CCDC40-206ENST00000572083 MEIS3P1A6NDR6 274 aa14.3□□□□□ -0.12
CCDC40-206ENST00000572083 SPP1P10451 314 aa14.3□□□□□ -0.12
CCDC40-206ENST00000572083 UBE2UQ5VVX9 321 aa14.3□□□□□ -0.12
CCDC40-206ENST00000572083 SFXN4Q6P4A7 337 aa14.3□□□□□ -0.12
CCDC40-206ENST00000572083 MORN3Q6PF18 240 aaPredicted RBP14.3□□□□□ -0.12
CCDC40-206ENST00000572083 DUSP18Q8NEJ0 188 aa14.3□□□□□ -0.12
CCDC40-206ENST00000572083 TSPAN14Q8NG11 270 aa14.3□□□□□ -0.12
CCDC40-206ENST00000572083 NDUFAF3Q9BU61 184 aa14.3□□□□□ -0.12
CCDC40-206ENST00000572083 ZFAND3Q9H8U3 227 aa14.3□□□□□ -0.12
CCDC40-206ENST00000572083 TMEM14BQ9NUH8 114 aa14.3□□□□□ -0.12
CCDC40-206ENST00000572083 IGLV2-18A0A075B6J9 118 aa14.29□□□□□ -0.12
CCDC40-206ENST00000572083 LGALS9BQ3B8N2 356 aa14.29□□□□□ -0.12
CCDC40-206ENST00000572083 TPRA1Q86W33 373 aa14.29□□□□□ -0.12
CCDC40-206ENST00000572083 STXBP6Q8NFX7 210 aa14.29□□□□□ -0.12
CCDC40-206ENST00000572083 OR5AP2Q8NGF4 316 aa14.29□□□□□ -0.12
CCDC40-206ENST00000572083 OR5H6Q8NGV6 325 aa14.29□□□□□ -0.12
CCDC40-206ENST00000572083 SLC25A38Q96DW6 304 aa14.29□□□□□ -0.12
CCDC40-206ENST00000572083 TXNL4BQ9NX01 149 aaKnown RBP14.29□□□□□ -0.12
CCDC40-206ENST00000572083 FKBP11Q9NYL4 201 aa14.29□□□□□ -0.12
CCDC40-206ENST00000572083 PLA2G2EQ9NZK7 142 aa14.29□□□□□ -0.12
CCDC40-206ENST00000572083 PUS1Q9Y606 427 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC40-206ENST00000572083 PGLYRP1O75594 196 aaPredicted RBP14.28□□□□□ -0.12
CCDC40-206ENST00000572083 ZNF688P0C7X2 276 aa14.28□□□□□ -0.12
CCDC40-206ENST00000572083 BORCS5Q969J3 196 aa14.28□□□□□ -0.12
CCDC40-206ENST00000572083 EHFQ9NZC4 300 aa14.28□□□□□ -0.12
CCDC40-206ENST00000572083 LRP1BQ9NZR2 4599 aa14.27□□□□□ -0.12
CCDC40-206ENST00000572083 ACTL10Q5JWF8 245 aa14.27□□□□□ -0.13
CCDC40-206ENST00000572083 CADM3Q8N126 398 aa14.27□□□□□ -0.13
CCDC40-206ENST00000572083 ZNF114Q8NC26 417 aa14.27□□□□□ -0.13
CCDC40-206ENST00000572083 CSNK1G2-AS1Q8NCQ2 148 aa14.27□□□□□ -0.13
CCDC40-206ENST00000572083 TMEM231Q9H6L2 316 aa14.27□□□□□ -0.13
CCDC40-206ENST00000572083 A0A1B0GU03 582 aa14.26□□□□□ -0.13
CCDC40-206ENST00000572083 K7EQG2 157 aa14.26□□□□□ -0.13
CCDC40-206ENST00000572083 ZNF600Q6ZNG1 722 aa14.26□□□□□ -0.13
CCDC40-206ENST00000572083 MOB3AQ96BX8 217 aa14.26□□□□□ -0.13
CCDC40-206ENST00000572083 TSC22D3Q99576 134 aa14.26□□□□□ -0.13
CCDC40-206ENST00000572083 ZNF2Q9BSG1 426 aaPredicted RBP14.26□□□□□ -0.13
CCDC40-206ENST00000572083 AUNIPQ9H7T9 357 aa14.26□□□□□ -0.13
CCDC40-206ENST00000572083 IFNA10P01566 189 aa14.25□□□□□ -0.13
CCDC40-206ENST00000572083 UBE2DNLQ8IWF7 75 aa14.25□□□□□ -0.13
CCDC40-206ENST00000572083 NRG4Q8WWG1 115 aa14.25□□□□□ -0.13
CCDC40-206ENST00000572083 GRAMD2BQ96HH9 432 aa14.25□□□□□ -0.13
CCDC40-206ENST00000572083 FXYD6Q9H0Q3 95 aa14.25□□□□□ -0.13
CCDC40-206ENST00000572083 FGF9P31371 208 aaPredicted RBP14.24□□□□□ -0.13
CCDC40-206ENST00000572083 NPBWR1P48145 328 aa14.24□□□□□ -0.13
CCDC40-206ENST00000572083 RFX2P48378 723 aa14.24□□□□□ -0.13
CCDC40-206ENST00000572083 PRCDQ00LT1 54 aa14.24□□□□□ -0.13
CCDC40-206ENST00000572083 MXD1Q05195 221 aa14.24□□□□□ -0.13
CCDC40-206ENST00000572083 Q6ZR54 194 aa14.24□□□□□ -0.13
CCDC40-206ENST00000572083 CMTM1Q8IZ96 169 aa14.24□□□□□ -0.13
CCDC40-206ENST00000572083 IFT46Q9NQC8 304 aa14.24□□□□□ -0.13
CCDC40-206ENST00000572083 CLEC2LP0C7M8 214 aa14.23□□□□□ -0.13
CCDC40-206ENST00000572083 NPPCP23582 126 aa14.23□□□□□ -0.13
CCDC40-206ENST00000572083 SDC2P34741 201 aa14.23□□□□□ -0.13
CCDC40-206ENST00000572083 CBX5P45973 191 aa14.23□□□□□ -0.13
CCDC40-206ENST00000572083 SPINK9Q5DT21 86 aa14.23□□□□□ -0.13
CCDC40-206ENST00000572083 OR4A16Q8NH70 328 aa14.23□□□□□ -0.13
CCDC40-206ENST00000572083 DCANP1Q8TF63 244 aa14.23□□□□□ -0.13
CCDC40-206ENST00000572083 A0A0A6YYH2 397 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 A6NJ64 397 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 IFNA21P01568 189 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 IFNA17P01571 189 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 PMP2P02689 132 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 P2RY1P47900 373 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 PPP5CP53041 499 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 IDNKQ5T6J7 187 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 DHRS11Q6UWP2 260 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 Q6ZRM9 215 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 SEC22AQ96IW7 307 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 CNBD2Q96M20 576 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 BLOC1S6Q9UL45 172 aa14.22□□□□□ -0.13
CCDC40-206ENST00000572083 A0A1W2PS18 150 aa14.21□□□□□ -0.13
CCDC40-206ENST00000572083 GPR31O00270 319 aa14.21□□□□□ -0.13
CCDC40-206ENST00000572083 CD74P04233 296 aa14.21□□□□□ -0.13
CCDC40-206ENST00000572083 NPY1RP25929 384 aa14.21□□□□□ -0.13
CCDC40-206ENST00000572083 PSMB9P28065 219 aa14.21□□□□□ -0.13
CCDC40-206ENST00000572083 PHLDA2Q53GA4 152 aa14.21□□□□□ -0.13
CCDC40-206ENST00000572083 H2BFWTQ7Z2G1 175 aa14.21□□□□□ -0.13
CCDC40-206ENST00000572083 METTL26Q96S19 204 aa14.21□□□□□ -0.13
CCDC40-206ENST00000572083 TMEM50AO95807 157 aa14.2□□□□□ -0.14
CCDC40-206ENST00000572083 IGKV1-39P01597 117 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms