RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 CTDSP1Q9GZU7 261 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 MANBALQ9NQG1 85 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 SRRM4A7MD48 611 aaKnown RBP13.29□□□□□ -0.28
RAB40B-206ENST00000571995 YPEL1O60688 119 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 SOD3P08294 240 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 TAS2R45P59539 299 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 RELBQ01201 579 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 PRSS8Q16651 343 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 YPEL2Q96QA6 119 aa13.29□□□□□ -0.28
RAB40B-206ENST00000571995 J3KRW8 73 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 TIMP3P35625 211 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 SRSF7Q16629 238 aaKnown RBP eCLIP13.28□□□□□ -0.28
RAB40B-206ENST00000571995 C10orf91Q5T1B1 145 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 Q8TCH9 128 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 ADTRPQ96IZ2 230 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 LINC00479Q96M42 142 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 TMUB1Q9BVT8 246 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 GGTLC1Q9BX51 225 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 SRD5A3Q9H8P0 318 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 ZNF137PP52743 207 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 LCN2P80188 198 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 MUC21A0A0G2JKD1 596 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 MUC21A0A140T8X8 626 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 E7EQL1 145 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 NDUFS7O75251 213 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 CXorf1O96002 111 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 CNTFRP26992 372 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 GCHFRP30047 84 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 MUC21Q5SSG8 566 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 ZNF114Q8NC26 417 aa13.28□□□□□ -0.28
RAB40B-206ENST00000571995 ASH1LQ9NR48 2969 aaKnown RBP13.28□□□□□ -0.28
RAB40B-206ENST00000571995 C5orf52A6NGY3 159 aa13.27□□□□□ -0.28
RAB40B-206ENST00000571995 ZNF729A6NN14 1252 aaPredicted RBP13.27□□□□□ -0.28
RAB40B-206ENST00000571995 LMO1P25800 156 aa13.27□□□□□ -0.28
RAB40B-206ENST00000571995 KRTDAPP60985 99 aa13.27□□□□□ -0.28
RAB40B-206ENST00000571995 RNASE7Q9H1E1 156 aaKnown RBP13.27□□□□□ -0.28
RAB40B-206ENST00000571995 TPSG1Q9NRR2 321 aa13.27□□□□□ -0.28
RAB40B-206ENST00000571995 COL5A1P20908 1838 aaPredicted RBP13.27□□□□□ -0.28
RAB40B-206ENST00000571995 SH2D7A6NKC9 451 aaPredicted RBP13.27□□□□□ -0.29
RAB40B-206ENST00000571995 IGLV1-44P01699 117 aa13.27□□□□□ -0.29
RAB40B-206ENST00000571995 AGAP20933 346 aa13.27□□□□□ -0.29
RAB40B-206ENST00000571995 C17orf58Q2M2W7 97 aa13.27□□□□□ -0.29
RAB40B-206ENST00000571995 Q56UQ5 140 aa13.27□□□□□ -0.29
RAB40B-206ENST00000571995 TUBG2Q9NRH3 451 aa13.27□□□□□ -0.29
RAB40B-206ENST00000571995 KCNIP2Q9NS61 270 aa13.27□□□□□ -0.29
RAB40B-206ENST00000571995 WDR83OSQ9Y284 106 aa13.27□□□□□ -0.29
RAB40B-206ENST00000571995 ECSCRQ19T08 205 aa13.27□□□□□ -0.29
RAB40B-206ENST00000571995 TUBA4BQ9H853 241 aa13.27□□□□□ -0.29
RAB40B-206ENST00000571995 GSN-AS1Q9NRJ2 163 aa13.27□□□□□ -0.29
RAB40B-206ENST00000571995 RPL27AP46776 148 aaKnown RBP13.26□□□□□ -0.29
RAB40B-206ENST00000571995 NUBP1P53384 320 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 DPPA3Q6W0C5 159 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 COL25A1Q9BXS0 654 aaPredicted RBP13.26□□□□□ -0.29
RAB40B-206ENST00000571995 CT45A6P0DMU7 189 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 CT45A5P0DMU8 189 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 CT45A7P0DMV0 189 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 RPL19P84098 196 aaKnown RBP13.26□□□□□ -0.29
RAB40B-206ENST00000571995 OR8B3Q8NGG8 313 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 CORO2AQ92828 525 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 OR8B2Q96RD0 313 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 RAB1BQ9H0U4 201 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 SLC45A2Q9UMX9 530 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 SNURFLB1AK76 121 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 TSTD3H0UI37 97 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 PRRX1P54821 245 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 TCTAP57738 103 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 EFNB3Q15768 340 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 C10orf113Q5VZT2 155 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 COA4Q9NYJ1 87 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 LINC00527Q9UJ94 153 aa13.26□□□□□ -0.29
RAB40B-206ENST00000571995 RPUSD1Q9UJJ7 312 aaKnown RBP13.26□□□□□ -0.29
RAB40B-206ENST00000571995 C15orf61A6NNL5 157 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 SEC14L6B5MCN3 397 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 CSN3P07498 182 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 CCKARP32238 428 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 KIR2DS2P43631 304 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 GNG5P63218 68 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 CYP2G1PQ6ZSU1 146 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 OR4C13Q8NGP0 309 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 OCC1Q8TAD7 63 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 MBD3L1Q8WWY6 194 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 RAB1CQ92928 201 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 TMPRSS3P57727 454 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 ZNF705AQ6ZN79 300 aaPredicted RBP13.25□□□□□ -0.29
RAB40B-206ENST00000571995 OR1L4Q8NGR5 311 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 TECRQ9NZ01 308 aaKnown RBP13.25□□□□□ -0.29
RAB40B-206ENST00000571995 IGHV3-66A0A0C4DH42 116 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 CGB1A6NKQ9 187 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 APOBEC3AP31941 199 aaPredicted RBP13.25□□□□□ -0.29
RAB40B-206ENST00000571995 LOXL3P58215 753 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 ZCCHC14Q8WYQ9 949 aaKnown RBP13.25□□□□□ -0.29
RAB40B-206ENST00000571995 MS4A10Q96PG2 267 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 SMDT1Q9H4I9 107 aa13.25□□□□□ -0.29
RAB40B-206ENST00000571995 NPIPB11E5RHQ5 1161 aa13.24□□□□□ -0.29
RAB40B-206ENST00000571995 OR5B3Q8NH48 314 aa13.24□□□□□ -0.29
RAB40B-206ENST00000571995 ZNF430Q9H8G1 570 aaPredicted RBP13.24□□□□□ -0.29
RAB40B-206ENST00000571995 ZNF331Q9NQX6 463 aaPredicted RBP13.24□□□□□ -0.29
RAB40B-206ENST00000571995 WASHC3Q9Y3C0 194 aa13.24□□□□□ -0.29
RAB40B-206ENST00000571995 LYPD6BQ8NI32 183 aa13.24□□□□□ -0.29
RAB40B-206ENST00000571995 C11orf1Q9H5F2 150 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 249.3 ms