RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 MRGPRFQ96AM1 343 aa10.85□□□□□ -0.67
NDE1-203ENST00000570727 COMMD3Q9UBI1 195 aa10.85□□□□□ -0.67
NDE1-203ENST00000570727 MPTX1A8MV57 137 aa10.84□□□□□ -0.67
NDE1-203ENST00000570727 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
NDE1-203ENST00000570727 S100GP29377 79 aa10.84□□□□□ -0.67
NDE1-203ENST00000570727 TOMM20LQ6UXN7 152 aa10.84□□□□□ -0.67
NDE1-203ENST00000570727 RPP25LQ8N5L8 163 aaKnown RBP10.84□□□□□ -0.67
NDE1-203ENST00000570727 TMEM217Q8N7C4 229 aa10.84□□□□□ -0.67
NDE1-203ENST00000570727 RARRES2Q99969 163 aa10.84□□□□□ -0.67
NDE1-203ENST00000570727 C6orf62Q9GZU0 229 aaPredicted RBP10.84□□□□□ -0.67
NDE1-203ENST00000570727 SCPEP1Q9HB40 452 aa10.84□□□□□ -0.67
NDE1-203ENST00000570727 AGRNO00468 2067 aa10.83□□□□□ -0.68
NDE1-203ENST00000570727 GNG7O60262 68 aa10.83□□□□□ -0.68
NDE1-203ENST00000570727 APOA1P02647 267 aa10.83□□□□□ -0.68
NDE1-203ENST00000570727 ERHP84090 104 aaKnown RBP10.83□□□□□ -0.68
NDE1-203ENST00000570727 SPINK9Q5DT21 86 aa10.83□□□□□ -0.68
NDE1-203ENST00000570727 TCF24Q7RTU0 167 aa10.83□□□□□ -0.68
NDE1-203ENST00000570727 SNX29P2Q8IUI4 249 aa10.83□□□□□ -0.68
NDE1-203ENST00000570727 GATAD1Q8WUU5 269 aa10.83□□□□□ -0.68
NDE1-203ENST00000570727 ST8SIA2Q92186 375 aa10.83□□□□□ -0.68
NDE1-203ENST00000570727 PINX1Q96BK5 328 aaKnown RBP10.83□□□□□ -0.68
NDE1-203ENST00000570727 CMTM3Q96MX0 182 aa10.83□□□□□ -0.68
NDE1-203ENST00000570727 VSIRQ9H7M9 311 aa10.83□□□□□ -0.68
NDE1-203ENST00000570727 A0A087WXM4 84 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 A0A0B4J293 547 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 SMIM31A0A1B0GVY4 71 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 M0QYG6 137 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 IGKV1-5P01602 117 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 P0C879 139 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 ELK1P19419 428 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 RCVRNP35243 200 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 NCS1P62166 190 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 PVRIGQ6DKI7 326 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 OR11H2Q8NH07 326 aa10.82□□□□□ -0.68
NDE1-203ENST00000570727 HPGDSO60760 199 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 DEDDO75618 318 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 DFFBO76075 338 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 TMEM50AO95807 157 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 PI3P19957 117 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 NANOS2P60321 138 aaKnown RBP10.81□□□□□ -0.68
NDE1-203ENST00000570727 RND3P61587 244 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 PAFAH1B2P68402 229 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 LGALS9CQ6DKI2 356 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 DUSP18Q8NEJ0 188 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 TP53RKQ96S44 253 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 MS4A6AQ9H2W1 248 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 ZFAND3Q9H8U3 227 aa10.81□□□□□ -0.68
NDE1-203ENST00000570727 IGHV3-66A0A0C4DH42 116 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 A0A1B0GU03 582 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 INS-IGF2F8WCM5 200 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 ST8SIA3O43173 380 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 CD5P06127 495 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 NPBWR1P48145 328 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 VBP1P61758 197 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 MLANAQ16655 118 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 ZNF600Q6ZNG1 722 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 LHFPL1Q86WI0 220 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 FAM24BQ8N5W8 94 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 GINS3Q9BRX5 216 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 FUNDC2Q9BWH2 189 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 MRPL36Q9P0J6 103 aaKnown RBP10.8□□□□□ -0.68
NDE1-203ENST00000570727 KLK11Q9UBX7 282 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 PUS1Q9Y606 427 aaKnown RBP eCLIP10.8□□□□□ -0.68
NDE1-203ENST00000570727 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
NDE1-203ENST00000570727 RNASE2P10153 161 aaKnown RBP10.79□□□□□ -0.68
NDE1-203ENST00000570727 DEFB131AP59861 70 aa10.79□□□□□ -0.68
NDE1-203ENST00000570727 LEMD1Q68G75 181 aa10.79□□□□□ -0.68
NDE1-203ENST00000570727 C11orf45Q8TAV5 145 aa10.79□□□□□ -0.68
NDE1-203ENST00000570727 ZNF486Q96H40 463 aaPredicted RBP10.79□□□□□ -0.68
NDE1-203ENST00000570727 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
NDE1-203ENST00000570727 HERC2O95714 4834 aa10.79□□□□□ -0.68
NDE1-203ENST00000570727 TRAV2A0A0B4J234 112 aa10.78□□□□□ -0.68
NDE1-203ENST00000570727 DNASE2O00115 360 aaPredicted RBP10.78□□□□□ -0.68
NDE1-203ENST00000570727 DEFB4AO15263 64 aa10.78□□□□□ -0.68
NDE1-203ENST00000570727 CA1P00915 261 aaPredicted RBP10.78□□□□□ -0.68
NDE1-203ENST00000570727 PGAM2P15259 253 aa10.78□□□□□ -0.68
NDE1-203ENST00000570727 SNCAP37840 140 aa10.78□□□□□ -0.68
NDE1-203ENST00000570727 ETV6P41212 452 aa10.78□□□□□ -0.68
NDE1-203ENST00000570727 PIGPP57054 158 aa10.78□□□□□ -0.68
NDE1-203ENST00000570727 FNDC4Q9H6D8 234 aaPredicted RBP10.78□□□□□ -0.68
NDE1-203ENST00000570727 VCX3AQ9NNX9 186 aa10.78□□□□□ -0.68
NDE1-203ENST00000570727 FBXL17Q9UF56 701 aa10.78□□□□□ -0.68
NDE1-203ENST00000570727 A0A0G2JRQ6 117 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 C3orf85A0A1B0GTC6 90 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 TNFAIP8O95379 198 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 IFNA17P01571 189 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 CD3DP04234 171 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 GIG44P09565 113 aaPredicted RBP10.77□□□□□ -0.69
NDE1-203ENST00000570727 NPPCP23582 126 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 RPL11P62913 178 aaKnown RBP10.77□□□□□ -0.69
NDE1-203ENST00000570727 TMEM187Q14656 261 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 RBMS2Q15434 407 aaKnown RBP10.77□□□□□ -0.69
NDE1-203ENST00000570727 SP6Q3SY56 376 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 RNASE12Q5GAN4 147 aaKnown RBP10.77□□□□□ -0.69
NDE1-203ENST00000570727 SLC35G3Q8N808 338 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 OR52I2Q8NH67 350 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 KRTAP17-1Q9BYP8 105 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 MFFQ9GZY8 342 aa10.77□□□□□ -0.69
NDE1-203ENST00000570727 CLN5O75503 358 aa10.76□□□□□ -0.69
NDE1-203ENST00000570727 IFNA4P05014 189 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms