RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TMEM268Q5VZI3 342 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 SPSB3Q6PJ21 355 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 GTSCR1Q86UQ5 136 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 SGPP2Q8IWX5 399 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 TOMM5Q8N4H5 51 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 UBAC2Q8NBM4 344 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 GALNT14Q96FL9 552 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 ZNF414Q96IQ9 312 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 SCGB3A2Q96PL1 93 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 PDCD10Q9BUL8 212 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 C19orf73Q9NVV2 129 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 SELENOKQ9Y6D0 94 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 TMEM56-RWDD3S4R434 201 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 U3KQK5 164 aa9.83□□□□□ -0.84
CNOT1-220ENST00000569916 C8orf88P0DMB2 117 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 FCGR2BP31994 310 aaPredicted RBP9.82□□□□□ -0.84
CNOT1-220ENST00000569916 HOXA1P49639 335 aaPredicted RBP9.82□□□□□ -0.84
CNOT1-220ENST00000569916 ELLP55199 621 aaPredicted RBP9.82□□□□□ -0.84
CNOT1-220ENST00000569916 AP3S2P59780 193 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 SUPT4H1P63272 117 aaKnown RBP9.82□□□□□ -0.84
CNOT1-220ENST00000569916 TMEM187Q14656 261 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 PVRIGQ6DKI7 326 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 TMEM61Q8N0U2 210 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 UXS1Q8NBZ7 420 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 MARC2Q969Z3 335 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 WDR89Q96FK6 387 aaPredicted RBP9.82□□□□□ -0.84
CNOT1-220ENST00000569916 SRRQ9GZT4 340 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 PALMDQ9NP74 551 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 PRR13Q9NZ81 148 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 CACNG5Q9UF02 275 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 UFC1Q9Y3C8 167 aa9.82□□□□□ -0.84
CNOT1-220ENST00000569916 NDUFA4O00483 81 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 CTSGP08311 255 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 RNASE2P10153 161 aaKnown RBP9.81□□□□□ -0.84
CNOT1-220ENST00000569916 AKR1C4P17516 323 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 SNCAP37840 140 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 CD81P60033 236 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 SPANXN2Q5MJ10 180 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 ZNF57Q68EA5 555 aaPredicted RBP9.81□□□□□ -0.84
CNOT1-220ENST00000569916 BTNL8Q6UX41 500 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 OR52E5Q8NH55 327 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 DEDD2Q8WXF8 326 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 IL22RA2Q969J5 263 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 PINX1Q96BK5 328 aaKnown RBP9.81□□□□□ -0.84
CNOT1-220ENST00000569916 GPR146Q96CH1 333 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 GAR1Q9NY12 217 aaKnown RBP9.81□□□□□ -0.84
CNOT1-220ENST00000569916 MRPL27Q9P0M9 148 aaKnown RBP9.81□□□□□ -0.84
CNOT1-220ENST00000569916 KCNIP3Q9Y2W7 256 aa9.81□□□□□ -0.84
CNOT1-220ENST00000569916 IGHV3-48P01763 117 aa9.8□□□□□ -0.84
CNOT1-220ENST00000569916 CD7P09564 240 aa9.8□□□□□ -0.84
CNOT1-220ENST00000569916 MFAP4P55083 255 aa9.8□□□□□ -0.84
CNOT1-220ENST00000569916 SPCS3P61009 180 aa9.8□□□□□ -0.84
CNOT1-220ENST00000569916 GUCA2BQ16661 112 aa9.8□□□□□ -0.84
CNOT1-220ENST00000569916 BSXQ3C1V8 233 aa9.8□□□□□ -0.84
CNOT1-220ENST00000569916 WWC2-AS2Q96NR7 200 aa9.8□□□□□ -0.84
CNOT1-220ENST00000569916 TXN2Q99757 166 aa9.8□□□□□ -0.84
CNOT1-220ENST00000569916 NEURL2Q9BR09 285 aa9.8□□□□□ -0.84
CNOT1-220ENST00000569916 DAZ1Q9NQZ3 744 aaKnown RBP9.8□□□□□ -0.84
CNOT1-220ENST00000569916 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.8□□□□□ -0.84
CNOT1-220ENST00000569916 IGHV3OR16-8A0A075B7F1 116 aa9.79□□□□□ -0.84
CNOT1-220ENST00000569916 CORTO00230 105 aa9.79□□□□□ -0.84
CNOT1-220ENST00000569916 NUPL2O15504 423 aaKnown RBP9.79□□□□□ -0.84
CNOT1-220ENST00000569916 TMED4Q7Z7H5 227 aa9.79□□□□□ -0.84
CNOT1-220ENST00000569916 TM2D3Q9BRN9 247 aa9.79□□□□□ -0.84
CNOT1-220ENST00000569916 C20orf24Q9BUV8 137 aa9.79□□□□□ -0.84
CNOT1-220ENST00000569916 WFDC10AQ9H1F0 79 aa9.79□□□□□ -0.84
CNOT1-220ENST00000569916 ENY2Q9NPA8 101 aa9.79□□□□□ -0.84
CNOT1-220ENST00000569916 A0A0B4J2A0 478 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 GNG7O60262 68 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 SCAF4O95104 1147 aaKnown RBP9.78□□□□□ -0.84
CNOT1-220ENST00000569916 SULT1A3P0DMM9 295 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 SULT1A4P0DMN0 295 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 SUB1P53999 127 aaKnown RBP eCLIP9.78□□□□□ -0.84
CNOT1-220ENST00000569916 SRPXP78539 464 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 RELQ04864 619 aaPredicted RBP9.78□□□□□ -0.84
CNOT1-220ENST00000569916 BAK1Q16611 211 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 NMSQ5H8A3 153 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 LYZL2Q7Z4W2 148 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 RCHY1Q96PM5 261 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 SDHCQ99643 169 aaPredicted RBP9.78□□□□□ -0.84
CNOT1-220ENST00000569916 SLC25A21Q9BQT8 299 aaPredicted RBP9.78□□□□□ -0.84
CNOT1-220ENST00000569916 FNDC4Q9H6D8 234 aaPredicted RBP9.78□□□□□ -0.84
CNOT1-220ENST00000569916 NDUFA13Q9P0J0 144 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 SHPKQ9UHJ6 478 aa9.78□□□□□ -0.84
CNOT1-220ENST00000569916 TENM3Q9P273 2699 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 TRAV25A0A0B4J276 109 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 C15orf62A8K5M9 175 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 K7EMT4 169 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 ZNF207O43670 478 aaKnown RBP9.77□□□□□ -0.85
CNOT1-220ENST00000569916 NXPH3O95157 252 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 ANXA3P12429 323 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 HTR2BP41595 481 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 NPBWR1P48145 328 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 TMEM128Q5BJH2 165 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 LINC00322Q6ZN03 302 aaPredicted RBP9.77□□□□□ -0.85
CNOT1-220ENST00000569916 LGI3Q8N145 548 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 DUSP18Q8NEJ0 188 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 OR10C1Q96KK4 312 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 TUBA4BQ9H853 241 aa9.77□□□□□ -0.85
CNOT1-220ENST00000569916 MRPL36Q9P0J6 103 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms