RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 FXYD6Q9H0Q3 95 aa11.03□□□□□ -0.64
COMMD4-223ENST00000568301 IGHV3-49A0A0A0MS15 119 aa11.02□□□□□ -0.65
COMMD4-223ENST00000568301 GNG7O60262 68 aa11.02□□□□□ -0.65
COMMD4-223ENST00000568301 MT-CO2P00403 227 aa11.02□□□□□ -0.65
COMMD4-223ENST00000568301 HSPE1P61604 102 aaKnown RBP11.02□□□□□ -0.65
COMMD4-223ENST00000568301 PRCDQ00LT1 54 aa11.02□□□□□ -0.65
COMMD4-223ENST00000568301 RBMS2Q15434 407 aaKnown RBP11.02□□□□□ -0.65
COMMD4-223ENST00000568301 NEDD8Q15843 81 aa11.02□□□□□ -0.65
COMMD4-223ENST00000568301 PHLDA2Q53GA4 152 aa11.02□□□□□ -0.65
COMMD4-223ENST00000568301 H2BFWTQ7Z2G1 175 aa11.02□□□□□ -0.65
COMMD4-223ENST00000568301 SAMD12Q8N8I0 201 aa11.02□□□□□ -0.65
COMMD4-223ENST00000568301 OR4A16Q8NH70 328 aa11.02□□□□□ -0.65
COMMD4-223ENST00000568301 GINS3Q9BRX5 216 aa11.02□□□□□ -0.65
COMMD4-223ENST00000568301 IGKV3-7A0A075B6H7 116 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 DFFBO76075 338 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 HRH1P35367 487 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 RPS19P39019 145 aaKnown RBP11.01□□□□□ -0.65
COMMD4-223ENST00000568301 NANOS2P60321 138 aaKnown RBP11.01□□□□□ -0.65
COMMD4-223ENST00000568301 ERHP84090 104 aaKnown RBP11.01□□□□□ -0.65
COMMD4-223ENST00000568301 PRR20EP86478 221 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 PRR20CP86479 221 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 PRR20DP86480 221 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 PRR20BP86481 221 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 PRR20AP86496 221 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 TCF24Q7RTU0 167 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 GBGT1Q8N5D6 347 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 VSIRQ9H7M9 311 aa11.01□□□□□ -0.65
COMMD4-223ENST00000568301 IGHV3OR16-13A0A075B7E8 117 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 IGHV3-74A0A0B4J1X5 117 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 TRAV2A0A0B4J234 112 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 IGHV3-48P01763 117 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 EIF4EP06730 217 aaKnown RBP11□□□□□ -0.65
COMMD4-223ENST00000568301 HLA-DMAP28067 261 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 NPBWR1P48145 328 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 UCP3P55916 312 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 TSPAN5P62079 268 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 TMEM187Q14656 261 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 TOMM20LQ6UXN7 152 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 TBC1D26Q86UD7 250 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 DUSP18Q8NEJ0 188 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 GPX8Q8TED1 209 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 C2CD4CQ8TF44 421 aa11□□□□□ -0.65
COMMD4-223ENST00000568301 MRPS26Q9BYN8 205 aaKnown RBP11□□□□□ -0.65
COMMD4-223ENST00000568301 DNAH17Q9UFH2 4485 aa10.99□□□□□ -0.65
COMMD4-223ENST00000568301 CA1P00915 261 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-223ENST00000568301 IGKV1-39P01597 117 aa10.99□□□□□ -0.65
COMMD4-223ENST00000568301 IGKV1D-39P04432 117 aa10.99□□□□□ -0.65
COMMD4-223ENST00000568301 LILRB2Q8N423 598 aa10.99□□□□□ -0.65
COMMD4-223ENST00000568301 ST8SIA2Q92186 375 aa10.99□□□□□ -0.65
COMMD4-223ENST00000568301 PINX1Q96BK5 328 aaKnown RBP10.99□□□□□ -0.65
COMMD4-223ENST00000568301 MS4A6AQ9H2W1 248 aa10.99□□□□□ -0.65
COMMD4-223ENST00000568301 FBXL17Q9UF56 701 aa10.99□□□□□ -0.65
COMMD4-223ENST00000568301 AGRNO00468 2067 aa10.98□□□□□ -0.65
COMMD4-223ENST00000568301 INS-IGF2F8WCM5 200 aa10.98□□□□□ -0.65
COMMD4-223ENST00000568301 DNASE2O00115 360 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-223ENST00000568301 ST8SIA3O43173 380 aa10.98□□□□□ -0.65
COMMD4-223ENST00000568301 APOHP02749 345 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-223ENST00000568301 TGFBR1P36897 503 aa10.98□□□□□ -0.65
COMMD4-223ENST00000568301 DEFB131AP59861 70 aa10.98□□□□□ -0.65
COMMD4-223ENST00000568301 ZNF600Q6ZNG1 722 aa10.98□□□□□ -0.65
COMMD4-223ENST00000568301 MRGPRFQ96AM1 343 aa10.98□□□□□ -0.65
COMMD4-223ENST00000568301 HRH4Q9H3N8 390 aa10.98□□□□□ -0.65
COMMD4-223ENST00000568301 SCPEP1Q9HB40 452 aa10.98□□□□□ -0.65
COMMD4-223ENST00000568301 SMIM31A0A1B0GVY4 71 aa10.97□□□□□ -0.65
COMMD4-223ENST00000568301 TMEM50AO95807 157 aa10.97□□□□□ -0.65
COMMD4-223ENST00000568301 SMIM18P0DKX4 95 aa10.97□□□□□ -0.65
COMMD4-223ENST00000568301 SNCAP37840 140 aa10.97□□□□□ -0.65
COMMD4-223ENST00000568301 RPL11P62913 178 aaKnown RBP10.97□□□□□ -0.65
COMMD4-223ENST00000568301 PVRIGQ6DKI7 326 aa10.97□□□□□ -0.65
COMMD4-223ENST00000568301 TMEM231Q9H6L2 316 aa10.97□□□□□ -0.65
COMMD4-223ENST00000568301 ZFAND3Q9H8U3 227 aa10.97□□□□□ -0.65
COMMD4-223ENST00000568301 PUS1Q9Y606 427 aaKnown RBP eCLIP10.97□□□□□ -0.65
COMMD4-223ENST00000568301 A0A1W2PS18 150 aa10.96□□□□□ -0.65
COMMD4-223ENST00000568301 C11orf94C9JXX5 98 aa10.96□□□□□ -0.65
COMMD4-223ENST00000568301 DEFB4AO15263 64 aa10.96□□□□□ -0.65
COMMD4-223ENST00000568301 APOA1P02647 267 aa10.96□□□□□ -0.65
COMMD4-223ENST00000568301 NPPCP23582 126 aa10.96□□□□□ -0.65
COMMD4-223ENST00000568301 ALDH3B2P48448 385 aa10.96□□□□□ -0.65
COMMD4-223ENST00000568301 TMEM41BQ5BJD5 291 aa10.96□□□□□ -0.65
COMMD4-223ENST00000568301 LEMD1Q68G75 181 aa10.96□□□□□ -0.65
COMMD4-223ENST00000568301 YIPF6Q96EC8 236 aa10.96□□□□□ -0.65
COMMD4-223ENST00000568301 A0A1B0GU03 582 aa10.95□□□□□ -0.66
COMMD4-223ENST00000568301 CORTO00230 105 aa10.95□□□□□ -0.66
COMMD4-223ENST00000568301 RCVRNP35243 200 aa10.95□□□□□ -0.66
COMMD4-223ENST00000568301 SUB1P53999 127 aaKnown RBP eCLIP10.95□□□□□ -0.66
COMMD4-223ENST00000568301 STHQ8IWL8 128 aa10.95□□□□□ -0.66
COMMD4-223ENST00000568301 FAM24BQ8N5W8 94 aa10.95□□□□□ -0.66
COMMD4-223ENST00000568301 Q8NAQ8 132 aa10.95□□□□□ -0.66
COMMD4-223ENST00000568301 ZNF486Q96H40 463 aaPredicted RBP10.95□□□□□ -0.66
COMMD4-223ENST00000568301 APLNQ9ULZ1 77 aa10.95□□□□□ -0.66
COMMD4-223ENST00000568301 PKD1P98161 4303 aa10.95□□□□□ -0.66
COMMD4-223ENST00000568301 A0A0B4J293 547 aa10.94□□□□□ -0.66
COMMD4-223ENST00000568301 IGHV3-66A0A0C4DH42 116 aa10.94□□□□□ -0.66
COMMD4-223ENST00000568301 GIG44P09565 113 aaPredicted RBP10.94□□□□□ -0.66
COMMD4-223ENST00000568301 P0C879 139 aa10.94□□□□□ -0.66
COMMD4-223ENST00000568301 RPL5P46777 297 aaKnown RBP10.94□□□□□ -0.66
COMMD4-223ENST00000568301 RND3P61587 244 aa10.94□□□□□ -0.66
COMMD4-223ENST00000568301 LSM3P62310 102 aaKnown RBP10.94□□□□□ -0.66
COMMD4-223ENST00000568301 IZUMO4Q1ZYL8 232 aa10.94□□□□□ -0.66
COMMD4-223ENST00000568301 GRAMD2BQ96HH9 432 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms