RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 FFAR4Q5NUL3 377 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 C10orf91Q5T1B1 145 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 SPSB3Q6PJ21 355 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 SFT2D1Q8WV19 159 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 RCC1LQ96I51 464 aaKnown RBP11.69□□□□□ -0.54
COMMD4-221ENST00000567935 TBX15Q96SF7 602 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-221ENST00000567935 CDC42EP3Q9UKI2 254 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 CARHSP1Q9Y2V2 147 aaKnown RBP11.69□□□□□ -0.54
COMMD4-221ENST00000567935 LSM4Q9Y4Z0 139 aaKnown RBP11.69□□□□□ -0.54
COMMD4-221ENST00000567935 CTXND1A0A1B0GTU2 59 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 CORTO00230 105 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 AGPAT2O15120 278 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 NBR2O15453 112 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 IFNA1P01562 189 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 OPN1MWP04001 364 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 OPN1MW2P0DN77 364 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 OPN1MW3P0DN78 364 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 PAX8Q06710 450 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 CD69Q07108 199 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 CLEC12BQ2HXU8 276 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 MRGPRG-AS1Q2M3A8 158 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 LDLRAD2Q5SZI1 272 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 PVRIGQ6DKI7 326 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 ETFRF1Q6IPR1 90 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 TMEM144Q7Z5S9 345 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 RFNGQ9Y644 331 aa11.68□□□□□ -0.54
COMMD4-221ENST00000567935 WNK2Q9Y3S1 2297 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 IGHV4-61A0A0C4DH41 118 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 CGB1A6NKQ9 187 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 NDUFS6O75380 124 aaKnown RBP11.67□□□□□ -0.54
COMMD4-221ENST00000567935 BRS3P32247 399 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 RPL29P47914 159 aaKnown RBP11.67□□□□□ -0.54
COMMD4-221ENST00000567935 ELLP55199 621 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-221ENST00000567935 PRB3Q04118 309 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-221ENST00000567935 AKR1C1Q04828 323 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 MMDQ15546 238 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 TNXAQ16473 311 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 TMEM249Q2WGJ8 235 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 ARSJQ5FYB0 599 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-221ENST00000567935 ACSM6Q6P461 480 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 LHFPL4Q7Z7J7 247 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 SVBPQ8N300 66 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 OR10G4Q8NGN3 311 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 OR10G9Q8NGN4 311 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 OR10G7Q8NGN6 311 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 RITA1Q96K30 269 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 SLC35E1Q96K37 410 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 SCRT1Q9BWW7 348 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 GGTLC1Q9BX51 225 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 EIF5A2Q9GZV4 153 aaKnown RBP11.67□□□□□ -0.54
COMMD4-221ENST00000567935 SLC39A9Q9NUM3 307 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 HILPDAQ9Y5L2 63 aa11.67□□□□□ -0.54
COMMD4-221ENST00000567935 IGLC7A0M8Q6 106 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 MAP1LC3B2A6NCE7 125 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 RBFOX3A6NFN3 312 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 SEC14L6B5MCN3 397 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 FAM157AC9JC47 383 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 F8W036 122 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 IGKV1D-33P01593 117 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 IGKV1-33P01594 117 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 APOC3P02656 99 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 OR13C7P0DN81 318 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 GATA3P23771 443 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 WT1-ASQ06250 92 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 PLGLAQ15195 96 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 SSX2Q16385 188 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 KHDC3LQ587J8 217 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 OR10W1Q8NGF6 305 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 OR1L6Q8NGR2 347 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 EAF1Q96JC9 268 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-221ENST00000567935 MAP1LC3BQ9GZQ8 125 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 C1RLQ9NZP8 487 aa11.66□□□□□ -0.54
COMMD4-221ENST00000567935 HSPB1P04792 205 aaKnown RBP11.65□□□□□ -0.54
COMMD4-221ENST00000567935 FAM106CPP0CH98 169 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 PPT1P50897 306 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 ZNF506Q5JVG8 444 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 C10orf55Q5SWW7 151 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 RBMS3Q6XE24 437 aaKnown RBP11.65□□□□□ -0.54
COMMD4-221ENST00000567935 SLC16A13Q7RTY0 426 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 RPP25LQ8N5L8 163 aaKnown RBP11.65□□□□□ -0.54
COMMD4-221ENST00000567935 OR1P1Q8NH06 330 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 C1orf159Q96HA4 380 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 P2RX4Q99571 388 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 MGST2Q99735 147 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 SLC35B3Q9H1N7 401 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 FBXL15Q9H469 300 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 VSIRQ9H7M9 311 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 FAM96BQ9Y3D0 163 aa11.65□□□□□ -0.54
COMMD4-221ENST00000567935 PKD1L1Q8TDX9 2849 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 IGHV4-30-2A0A087WSY4 118 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 NPFFO15130 113 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 MSMBP08118 114 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 SFTA3P0C7M3 94 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 CNTFRP26992 372 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 SRSF3P84103 164 aaKnown RBP11.64□□□□□ -0.55
COMMD4-221ENST00000567935 HES1Q14469 280 aa11.64□□□□□ -0.55
COMMD4-221ENST00000567935 ZNF726P1Q15940 193 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms