RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 RND3P61587 244 aa11.04□□□□□ -0.64
RNF40-209ENST00000566703 APRG1Q8IVJ8 170 aa11.04□□□□□ -0.64
RNF40-209ENST00000566703 DUSP18Q8NEJ0 188 aa11.04□□□□□ -0.64
RNF40-209ENST00000566703 ZNF486Q96H40 463 aaPredicted RBP11.04□□□□□ -0.64
RNF40-209ENST00000566703 TRAV2A0A0B4J234 112 aa11.03□□□□□ -0.64
RNF40-209ENST00000566703 DFFBO76075 338 aa11.03□□□□□ -0.64
RNF40-209ENST00000566703 ATG12O94817 140 aa11.03□□□□□ -0.64
RNF40-209ENST00000566703 PHLDA1Q8WV24 401 aaPredicted RBP11.03□□□□□ -0.64
RNF40-209ENST00000566703 MRGPRFQ96AM1 343 aa11.03□□□□□ -0.64
RNF40-209ENST00000566703 RARRES2Q99969 163 aa11.03□□□□□ -0.64
RNF40-209ENST00000566703 VSIRQ9H7M9 311 aa11.03□□□□□ -0.64
RNF40-209ENST00000566703 CORTO00230 105 aa11.02□□□□□ -0.65
RNF40-209ENST00000566703 SNCAP37840 140 aa11.02□□□□□ -0.65
RNF40-209ENST00000566703 PVRIGQ6DKI7 326 aa11.02□□□□□ -0.65
RNF40-209ENST00000566703 TOMM20LQ6UXN7 152 aa11.02□□□□□ -0.65
RNF40-209ENST00000566703 ZNF600Q6ZNG1 722 aa11.02□□□□□ -0.65
RNF40-209ENST00000566703 TCF24Q7RTU0 167 aa11.02□□□□□ -0.65
RNF40-209ENST00000566703 SNX29P2Q8IUI4 249 aa11.02□□□□□ -0.65
RNF40-209ENST00000566703 PINX1Q96BK5 328 aaKnown RBP11.02□□□□□ -0.65
RNF40-209ENST00000566703 MFFQ9GZY8 342 aa11.02□□□□□ -0.65
RNF40-209ENST00000566703 IGHV3-49A0A0A0MS15 119 aa11.01□□□□□ -0.65
RNF40-209ENST00000566703 TNFAIP8O95379 198 aa11.01□□□□□ -0.65
RNF40-209ENST00000566703 TMEM50AO95807 157 aa11.01□□□□□ -0.65
RNF40-209ENST00000566703 IGHV3-48P01763 117 aa11.01□□□□□ -0.65
RNF40-209ENST00000566703 TFPI2P48307 235 aa11.01□□□□□ -0.65
RNF40-209ENST00000566703 SUB1P53999 127 aaKnown RBP eCLIP11.01□□□□□ -0.65
RNF40-209ENST00000566703 LHFPL1Q86WI0 220 aa11.01□□□□□ -0.65
RNF40-209ENST00000566703 C11orf68Q9H3H3 251 aaKnown RBP11.01□□□□□ -0.65
RNF40-209ENST00000566703 TMEM231Q9H6L2 316 aa11.01□□□□□ -0.65
RNF40-209ENST00000566703 HYDINQ4G0P3 5121 aa11.01□□□□□ -0.65
RNF40-209ENST00000566703 IGKV3-7A0A075B6H7 116 aa11□□□□□ -0.65
RNF40-209ENST00000566703 ST8SIA3O43173 380 aa11□□□□□ -0.65
RNF40-209ENST00000566703 P0C879 139 aa11□□□□□ -0.65
RNF40-209ENST00000566703 ELK1P19419 428 aa11□□□□□ -0.65
RNF40-209ENST00000566703 RORCP51449 518 aa11□□□□□ -0.65
RNF40-209ENST00000566703 LGALS9CQ6DKI2 356 aa11□□□□□ -0.65
RNF40-209ENST00000566703 MZT2AQ6P582 158 aa11□□□□□ -0.65
RNF40-209ENST00000566703 GBGT1Q8N5D6 347 aa11□□□□□ -0.65
RNF40-209ENST00000566703 ARRDC1Q8N5I2 433 aa11□□□□□ -0.65
RNF40-209ENST00000566703 FUNDC2Q9BWH2 189 aa11□□□□□ -0.65
RNF40-209ENST00000566703 A0A0B4J293 547 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 A0A1W2PS18 150 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 M0QYG6 137 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
RNF40-209ENST00000566703 HPGDSO60760 199 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 B3GALNT1O75752 331 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 IGKV1-5P01602 117 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 PGAM2P15259 253 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 TBPP20226 339 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 RPL5P46777 297 aaKnown RBP10.99□□□□□ -0.65
RNF40-209ENST00000566703 PIGPP57054 158 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 NCS1P62166 190 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 ZNF124Q15973 351 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 RNASE10Q5GAN6 216 aaKnown RBP10.99□□□□□ -0.65
RNF40-209ENST00000566703 SLC35G3Q8N808 338 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 OR11H2Q8NH07 326 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 C11orf45Q8TAV5 145 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 ZFAND1Q8TCF1 268 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 ST8SIA2Q92186 375 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 PDCD10Q9BUL8 212 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 MS4A6AQ9H2W1 248 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 ZFAND3Q9H8U3 227 aa10.99□□□□□ -0.65
RNF40-209ENST00000566703 PUS1Q9Y606 427 aaKnown RBP eCLIP10.99□□□□□ -0.65
RNF40-209ENST00000566703 IGHV3OR16-13A0A075B7E8 117 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 IGHV3-74A0A0B4J1X5 117 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 C3orf85A0A1B0GTC6 90 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 IFNA17P01571 189 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 IFNA4P05014 189 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 NPPCP23582 126 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 TCTAP57738 103 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 VBP1P61758 197 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 TMEM187Q14656 261 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 IZUMO4Q1ZYL8 232 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 LILRB2Q8N423 598 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 C15orf40Q8WUR7 153 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 TP53RKQ96S44 253 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 KLK11Q9UBX7 282 aa10.98□□□□□ -0.65
RNF40-209ENST00000566703 PLECQ15149 4684 aaKnown RBP10.97□□□□□ -0.65
RNF40-209ENST00000566703 FAM25AB3EWG3 89 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 FAM25CB3EWG5 89 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 FAM25GB3EWG6 89 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 CLN5O75503 358 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 SCGB2A1O75556 95 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 APOHP02749 345 aaPredicted RBP10.97□□□□□ -0.65
RNF40-209ENST00000566703 RNASE2P10153 161 aaKnown RBP10.97□□□□□ -0.65
RNF40-209ENST00000566703 AKR1C2P52895 323 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 DEFB131AP59861 70 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 RPL11P62913 178 aaKnown RBP10.97□□□□□ -0.65
RNF40-209ENST00000566703 RBMS2Q15434 407 aaKnown RBP10.97□□□□□ -0.65
RNF40-209ENST00000566703 TMEM41BQ5BJD5 291 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 CCDC71LQ8N9Z2 235 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 OR4X1Q8NH49 305 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 TERB2Q8NHR7 220 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 AP3S1Q92572 193 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 RRNAD1Q96FB5 475 aaKnown RBP10.97□□□□□ -0.65
RNF40-209ENST00000566703 COPZ2Q9P299 210 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 MTFP1Q9UDX5 166 aa10.97□□□□□ -0.65
RNF40-209ENST00000566703 TRAV30A0A087WSZ9 112 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 A0A1B0GU03 582 aa10.96□□□□□ -0.65
RNF40-209ENST00000566703 CA1P00915 261 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms