RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 OR10P1Q8NGE3 313 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 RNASEH2CQ8TDP1 164 aaKnown RBP6.09□□□□□ -1.43
CDH1-208ENST00000565810 PINX1Q96BK5 328 aaKnown RBP6.09□□□□□ -1.43
CDH1-208ENST00000565810 MISP3Q96FF7 219 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 C19orf24Q9BVV8 132 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 LYRM2Q9NU23 88 aaPredicted RBP6.09□□□□□ -1.43
CDH1-208ENST00000565810 OR5AC2Q9NZP5 309 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 MBD2Q9UBB5 411 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 FBXL7Q9UJT9 491 aa6.09□□□□□ -1.43
CDH1-208ENST00000565810 NIPBLQ6KC79 2804 aaeCLIP6.09□□□□□ -1.43
CDH1-208ENST00000565810 FXYD6-FXYD2A0A087WZ82 144 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 TRAV14DV4A0A0A6YYC5 116 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 TRBV9A0A0B4J1U6 114 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 TCRBV4S1A1TA0A5B7 111 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 FAM24AA6NFZ4 105 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 C15orf62A8K5M9 175 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 H0YIZ8 118 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 SOX15O60248 233 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 SCGB2A1O75556 95 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 TMEM50AO95807 157 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 MT-CO2P00403 227 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 METTL15P1P0C7V9 234 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 PSMB8P28062 276 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 GPX4P36969 197 aaPredicted RBP6.08□□□□□ -1.44
CDH1-208ENST00000565810 BAXQ07812 192 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 BSXQ3C1V8 233 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 KHDC1LQ5JSQ8 128 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 FAM209BQ5JX69 171 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 TMEM14EPQ6UXP3 125 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 C19orf35Q6ZS72 473 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 ZNF546Q86UE3 836 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 TMEM252Q8N6L7 170 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 RNF152Q8N8N0 203 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 EEF1AKMT3Q96AZ1 226 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 ST6GAL2Q96JF0 529 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 CXorf58Q96LI9 332 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 FANCD2OSQ96PS1 177 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 OR4C12Q96R67 309 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 RNF126Q9BV68 326 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 KLK15Q9H2R5 256 aa6.08□□□□□ -1.44
CDH1-208ENST00000565810 JMJD1CQ15652 2540 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 SMLR1H3BR10 107 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 CST7O76096 145 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 NDUFB8O95169 186 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 RPLP1P05386 114 aaKnown RBP6.07□□□□□ -1.44
CDH1-208ENST00000565810 LYL1P12980 280 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 RPL12P30050 165 aaKnown RBP6.07□□□□□ -1.44
CDH1-208ENST00000565810 S100A11P31949 105 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 NPBWR1P48145 328 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 SULT1A1P50225 295 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 MFAP4P55083 255 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 RIPPLY3P57055 190 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 HBG1P69891 147 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 HBG2P69892 147 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 CD69Q07108 199 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 KLK9Q2XQG4 91 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 C15orf32Q32M92 178 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 Q5BKY6 102 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 PVRIGQ6DKI7 326 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 OR8G2PQ6IF36 304 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 C10orf99Q6UWK7 81 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 C12orf54Q6X4T0 127 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 TMEM217Q8N7C4 229 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 C11orf44Q8N8P7 122 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 VN1R17PQ8TDU5 208 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 WFDC12Q8WWY7 111 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 CACNG8Q8WXS5 425 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 SLC35E1Q96K37 410 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 C11orf1Q9H5F2 150 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 GAR1Q9NY12 217 aaKnown RBP6.07□□□□□ -1.44
CDH1-208ENST00000565810 C21orf62Q9NYP8 219 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 KLK9Q9UKQ9 250 aa6.07□□□□□ -1.44
CDH1-208ENST00000565810 TSSC4Q9Y5U2 329 aaPredicted RBP6.07□□□□□ -1.44
CDH1-208ENST00000565810 TRBV7-1A0A0A6YYK4 115 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 IGHV3-21A0A0B4J1V1 117 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 IGSF23A1L1A6 192 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 SMCO3A2RU48 225 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 HMSDA8MTL9 139 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 NUDT19A8MXV4 375 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 I3L2K1 104 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 C1QBP02746 253 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 CD28P10747 220 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 CDX1P47902 265 aaPredicted RBP6.06□□□□□ -1.44
CDH1-208ENST00000565810 AP2S1P53680 142 aaPredicted RBP6.06□□□□□ -1.44
CDH1-208ENST00000565810 MFAP2P55001 183 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 EWSR1Q01844 656 aaKnown RBP eCLIP6.06□□□□□ -1.44
CDH1-208ENST00000565810 ATP6V1FQ16864 119 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 ZFP69Q49AA0 526 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 Q56UQ5 140 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 ACSM6Q6P461 480 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 LCNL1Q6ZST4 164 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 ACOT7LQ6ZUV0 252 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 SLC16A13Q7RTY0 426 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 LILRB2Q8N423 598 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 C3orf56Q8N813 242 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 ZNF491Q8N8L2 437 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 UBAC2Q8NBM4 344 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 OR1S2Q8NGQ3 325 aa6.06□□□□□ -1.44
CDH1-208ENST00000565810 WIPF2Q8TF74 440 aaPredicted RBP6.06□□□□□ -1.44
CDH1-208ENST00000565810 SCARB1Q8WTV0 552 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms