RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 LOC102723971A0A1B0GUV8 181 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 RAMP3O60896 148 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 IGLC2P0DOY2 106 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 IGLC3P0DOY3 106 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 RPL23AP62750 156 aaKnown RBP14.45□□□□□ -0.1
GDE1-203ENST00000564172 CT45A1Q5HYN5 189 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 SAMD13Q5VXD3 122 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 WDR25Q64LD2 544 aaPredicted RBP14.45□□□□□ -0.1
GDE1-203ENST00000564172 DPPA3Q6W0C5 159 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 ZNF695Q8IW36 515 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 CT45A3Q8NHU0 189 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 CCL19Q99731 98 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 IFI27L2Q9H2X8 130 aa14.45□□□□□ -0.1
GDE1-203ENST00000564172 PROP1O75360 226 aa14.44□□□□□ -0.1
GDE1-203ENST00000564172 DLX6P56179 175 aa14.44□□□□□ -0.1
GDE1-203ENST00000564172 IAH1Q2TAA2 248 aaPredicted RBP14.44□□□□□ -0.1
GDE1-203ENST00000564172 SELENOHQ8IZQ5 122 aaKnown RBP14.44□□□□□ -0.1
GDE1-203ENST00000564172 ZNF439Q8NDP4 499 aa14.44□□□□□ -0.1
GDE1-203ENST00000564172 P2RX4Q99571 388 aa14.44□□□□□ -0.1
GDE1-203ENST00000564172 PATZ1Q9HBE1 687 aaKnown RBP14.44□□□□□ -0.1
GDE1-203ENST00000564172 DOCK11Q5JSL3 2073 aa14.44□□□□□ -0.1
GDE1-203ENST00000564172 TRAV1-1A0A0B4J248 108 aa14.43□□□□□ -0.1
GDE1-203ENST00000564172 GPR12P47775 334 aa14.43□□□□□ -0.1
GDE1-203ENST00000564172 RPL30P62888 115 aaKnown RBP14.43□□□□□ -0.1
GDE1-203ENST00000564172 PAX2Q02962 417 aa14.43□□□□□ -0.1
GDE1-203ENST00000564172 Q6ZWC4 215 aa14.43□□□□□ -0.1
GDE1-203ENST00000564172 KLHDC1Q8N7A1 406 aa14.43□□□□□ -0.1
GDE1-203ENST00000564172 IL22RA2Q969J5 263 aa14.43□□□□□ -0.1
GDE1-203ENST00000564172 LIN7CQ9NUP9 197 aaKnown RBP14.43□□□□□ -0.1
GDE1-203ENST00000564172 ZNF16P17020 682 aaPredicted RBP14.43□□□□□ -0.1
GDE1-203ENST00000564172 Q6ZN92 141 aa14.43□□□□□ -0.1
GDE1-203ENST00000564172 TMEM186Q96B77 213 aa14.43□□□□□ -0.1
GDE1-203ENST00000564172 A0A1B0GV50 99 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 HYPMO75409 117 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 IGHV4-39P01824 125 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 SERPINE2P07093 398 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 PLA2G2AP14555 144 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 LCN2P80188 198 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 ZNF585BQ52M93 769 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 FAM71F2Q6NXP2 309 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 ZNF525Q8N782 197 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 ARID1AO14497 2285 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 G3V4G9 280 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 HRASP01112 189 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 PSG1P11464 419 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 RIPPLY3P57055 190 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 CMTM2Q8TAZ6 248 aa14.42□□□□□ -0.1
GDE1-203ENST00000564172 SPG11Q96JI7 2443 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 SRP14P37108 136 aaKnown RBP14.41□□□□□ -0.1
GDE1-203ENST00000564172 GALR1P47211 349 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 LINC00205P59089 165 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 SUMO1P63165 101 aaKnown RBP14.41□□□□□ -0.1
GDE1-203ENST00000564172 CATR1Q13166 79 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 SLC25A48Q6ZT89 311 aaKnown RBP14.41□□□□□ -0.1
GDE1-203ENST00000564172 ZNF295-AS1Q8N0V1 137 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 C8orf46Q8TAG6 207 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 HSD17B10Q99714 261 aaKnown RBP14.41□□□□□ -0.1
GDE1-203ENST00000564172 UTP20O75691 2785 aaKnown RBP14.41□□□□□ -0.1
GDE1-203ENST00000564172 DUXBA0A1W2PPF3 345 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 ZNF266Q14584 549 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 RPL39P5Q59GN2 51 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 OR10W1Q8NGF6 305 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 OR2G3Q8NGZ4 309 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 VN1R17PQ8TDU5 208 aa14.41□□□□□ -0.1
GDE1-203ENST00000564172 PPIAL4CA0A0B4J2A2 164 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 LINC00473A8K010 186 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 C17orf98A8MV24 154 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 J3QKU1 62 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 IGKV1-39P01597 117 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 IGKV1D-39P04432 117 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 PPIAL4GP0DN37 164 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 VDAC1P21796 283 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 DUTP33316 252 aaKnown RBP14.4□□□□□ -0.1
GDE1-203ENST00000564172 BRWD1-AS2P59051 145 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 C1orf229Q6ZS94 237 aaPredicted RBP14.4□□□□□ -0.1
GDE1-203ENST00000564172 ODF3L1Q8IXM7 274 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 ZNF709Q8N972 641 aa14.4□□□□□ -0.1
GDE1-203ENST00000564172 J3QR06 171 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 RAB29O14966 203 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 SPATA45Q537H7 98 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 C16orf82Q7Z2V1 217 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 TMEM256Q8N2U0 113 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 OR2T10Q8NGZ9 312 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 ANAPC16Q96DE5 110 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 SSBP3Q9BWW4 388 aaPredicted RBP14.39□□□□□ -0.11
GDE1-203ENST00000564172 NAT8Q9UHE5 227 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 PIGBOS1A0A0B4J2F0 54 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 IGLC7A0M8Q6 106 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 GAGE12BA1L429 117 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 IGHV1-8P0DP01 117 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 COL8A1P27658 744 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 NMSQ5H8A3 153 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 OR4A47Q6IF82 309 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 LY6G5BQ8NDX9 201 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 ZNF596Q8TC21 504 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 ATP6V0BQ99437 205 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 BPESC1Q9GZL8 116 aa14.39□□□□□ -0.11
GDE1-203ENST00000564172 LSM5Q9Y4Y9 91 aaKnown RBP14.39□□□□□ -0.11
GDE1-203ENST00000564172 SAA2-SAA4A0A096LPE2 208 aa14.38□□□□□ -0.11
GDE1-203ENST00000564172 IGHV2-26A0A0B4J1V2 119 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 301 ms