RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 SAP30O75446 220 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 WISP2O76076 250 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 OR9G9P0C7N8 305 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 CD46P15529 392 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 SLAQ13239 276 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 C1orf185Q5T7R7 199 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 RIPPLY2Q5TAB7 128 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 TEPPQ6URK8 271 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 OR2M7Q8NG81 312 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 BLNKQ8WV28 456 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 TTTY12Q9BZ98 90 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 HILPDAQ9Y5L2 63 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 APELAP0DMC3 54 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 ZNF138P52744 262 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 LHFPL4Q7Z7J7 247 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 GGNQ86UU5 652 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 MGST2Q99735 147 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 GSX1Q9H4S2 264 aaPredicted RBP10.56□□□□□ -0.72
CCDC187-201ENST00000563590 GP6Q9HCN6 339 aa10.56□□□□□ -0.72
CCDC187-201ENST00000563590 IGHV1-69-2A0A0G2JMI3 117 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 FAM181BA6NEQ2 426 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 OR5B21A6NL26 309 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 C15orf62A8K5M9 175 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 HAND1O96004 215 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 B3GALT5-AS1P59052 145 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 UBE2L3P68036 154 aaKnown RBP10.55□□□□□ -0.72
CCDC187-201ENST00000563590 Q0VG73 95 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 EFNB3Q15768 340 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 COLCA1Q6ZS62 124 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 TMEM116Q8NCL8 245 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 GGTLC1Q9BX51 225 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 ZNF430Q9H8G1 570 aaPredicted RBP10.55□□□□□ -0.72
CCDC187-201ENST00000563590 CEP192Q8TEP8 1941 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 CSPG4Q6UVK1 2322 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 LAMA5O15230 3695 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 H3BTX0 84 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 SPRY3O43610 288 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 POLDIP2Q9Y2S7 368 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 TRAV30A0A087WSZ9 112 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 TRAV3A0A0B4J244 114 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 NTN3O00634 580 aaPredicted RBP10.55□□□□□ -0.72
CCDC187-201ENST00000563590 GNG7O60262 68 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 LEPROTL1O95214 131 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 STAG3L2P0CL84 134 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 STAG3L3P0CL85 134 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 MYOD1P15172 320 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 MOB1BQ7L9L4 216 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 SCCPDHQ8NBX0 429 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 S1PR3Q99500 378 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 TMEM70Q9BUB7 260 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 NPVFQ9HCQ7 196 aa10.55□□□□□ -0.72
CCDC187-201ENST00000563590 IGHV2-70DA0A0C4DH43 119 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 ZNF503-AS2A6NEH8 195 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 LINC00473A8K010 186 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.54□□□□□ -0.72
CCDC187-201ENST00000563590 J3QT63 122 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 ACP1P24666 158 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 TMEM136Q6ZRR5 245 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 TMEM45BQ96B21 275 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 ADAMTS20P59510 1910 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 CHEK1O14757 476 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 LINC00869P0C866 280 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 RPL39P5Q59GN2 51 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 KIR3DL3Q8N743 410 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 OR2Z1Q8NG97 314 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 TRBV6-6A0A0A6YYG2 114 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 TRGV5A0A0B4J1U4 118 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 MOB3BQ86TA1 216 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 DAZAP1Q96EP5 407 aaKnown RBP10.54□□□□□ -0.72
CCDC187-201ENST00000563590 V9GYV3 84 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 PTPN13Q12923 2485 aa10.54□□□□□ -0.72
CCDC187-201ENST00000563590 PMS2P5A8MQ11 134 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 PSPNO60542 156 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 CX3CL1P78423 397 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 MRPL49Q13405 166 aaKnown RBP10.53□□□□□ -0.72
CCDC187-201ENST00000563590 EBLN2Q6P2I7 272 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 FAM168AQ92567 244 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 TMEM191AQ9H0A3 160 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 SAP30LQ9HAJ7 183 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 C9orf172C9J069 976 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 KLRC4-KLRK1H3BQV0 150 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 FTH1P19P0C7X4 201 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 PSG9Q00887 426 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 SLC25A40Q8TBP6 338 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 C18orf32Q8TCD1 76 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 FAM173AQ9BQD7 235 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 TRBV9A0A0B4J1U6 114 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 CORTO00230 105 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 SSPNQ14714 243 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 OR10J3Q5JRS4 329 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 TCF24Q7RTU0 167 aa10.53□□□□□ -0.72
CCDC187-201ENST00000563590 ZCCHC24Q8N2G6 241 aaKnown RBP10.53□□□□□ -0.72
CCDC187-201ENST00000563590 MRPS16Q9Y3D3 137 aaKnown RBP10.53□□□□□ -0.72
CCDC187-201ENST00000563590 DNPH1O43598 174 aa10.52□□□□□ -0.73
CCDC187-201ENST00000563590 IGHV2-26A0A0B4J1V2 119 aa10.52□□□□□ -0.73
CCDC187-201ENST00000563590 CTRLP40313 264 aa10.52□□□□□ -0.73
CCDC187-201ENST00000563590 OPRK1P41145 380 aa10.52□□□□□ -0.73
CCDC187-201ENST00000563590 ZNF766Q5HY98 468 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms