RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 PDCD10Q9BUL8 212 aa21.39■■□□□ 1.01
NME3-203ENST00000563367 NDUFA13Q9P0J0 144 aa21.39■■□□□ 1.01
NME3-203ENST00000563367 KCNIP3Q9Y2W7 256 aa21.39■■□□□ 1.01
NME3-203ENST00000563367 ADMP35318 185 aa21.38■■□□□ 1.01
NME3-203ENST00000563367 AARDQ4LEZ3 155 aa21.38■■□□□ 1.01
NME3-203ENST00000563367 ATP6V0BQ99437 205 aa21.38■■□□□ 1.01
NME3-203ENST00000563367 CACNG5Q9UF02 275 aa21.38■■□□□ 1.01
NME3-203ENST00000563367 MT-CO2P00403 227 aa21.37■■□□□ 1.01
NME3-203ENST00000563367 IGHV3-48P01763 117 aa21.37■■□□□ 1.01
NME3-203ENST00000563367 BAK1Q16611 211 aa21.37■■□□□ 1.01
NME3-203ENST00000563367 Q56UQ5 140 aa21.37■■□□□ 1.01
NME3-203ENST00000563367 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.37■■□□□ 1.01
NME3-203ENST00000563367 FRMD6-AS1P0C7T7 363 aa21.36■■□□□ 1.01
NME3-203ENST00000563367 HOXA1P49639 335 aaPredicted RBP21.36■■□□□ 1.01
NME3-203ENST00000563367 ZNF57Q68EA5 555 aaPredicted RBP21.36■■□□□ 1.01
NME3-203ENST00000563367 SPSB3Q6PJ21 355 aa21.36■■□□□ 1.01
NME3-203ENST00000563367 UXS1Q8NBZ7 420 aa21.36■■□□□ 1.01
NME3-203ENST00000563367 DEDD2Q8WXF8 326 aa21.36■■□□□ 1.01
NME3-203ENST00000563367 IL22RA2Q969J5 263 aa21.36■■□□□ 1.01
NME3-203ENST00000563367 PINX1Q96BK5 328 aaKnown RBP21.36■■□□□ 1.01
NME3-203ENST00000563367 SDHCQ99643 169 aaPredicted RBP21.36■■□□□ 1.01
NME3-203ENST00000563367 TECRQ9NZ01 308 aaKnown RBP21.36■■□□□ 1.01
NME3-203ENST00000563367 ZNF785A8K8V0 405 aa21.35■■□□□ 1.01
NME3-203ENST00000563367 CTSGP08311 255 aa21.35■■□□□ 1.01
NME3-203ENST00000563367 NHLRC4P0CG21 123 aaPredicted RBP21.35■■□□□ 1.01
NME3-203ENST00000563367 RNASE2P10153 161 aaKnown RBP21.35■■□□□ 1.01
NME3-203ENST00000563367 SNCAP37840 140 aa21.35■■□□□ 1.01
NME3-203ENST00000563367 SPCS3P61009 180 aa21.35■■□□□ 1.01
NME3-203ENST00000563367 TMED4Q7Z7H5 227 aa21.35■■□□□ 1.01
NME3-203ENST00000563367 TMEM190Q8WZ59 177 aa21.35■■□□□ 1.01
NME3-203ENST00000563367 ZNF414Q96IQ9 312 aa21.35■■□□□ 1.01
NME3-203ENST00000563367 MLXQ9UH92 298 aa21.35■■□□□ 1.01
NME3-203ENST00000563367 IGHV4-30-4P0DP06 118 aa21.34■■□□□ 1.01
NME3-203ENST00000563367 MFAP4P55083 255 aa21.34■■□□□ 1.01
NME3-203ENST00000563367 PVRIGQ6DKI7 326 aa21.34■■□□□ 1.01
NME3-203ENST00000563367 SBSPONQ8IVN8 264 aa21.34■■□□□ 1.01
NME3-203ENST00000563367 OR52E5Q8NH55 327 aa21.34■■□□□ 1.01
NME3-203ENST00000563367 PALMDQ9NP74 551 aa21.34■■□□□ 1.01
NME3-203ENST00000563367 C8orf88P0DMB2 117 aa21.33■■□□□ 1.01
NME3-203ENST00000563367 FCGR2BP31994 310 aaPredicted RBP21.33■■□□□ 1.01
NME3-203ENST00000563367 LYZL2Q7Z4W2 148 aa21.33■■□□□ 1.01
NME3-203ENST00000563367 WDR89Q96FK6 387 aaPredicted RBP21.33■■□□□ 1.01
NME3-203ENST00000563367 SLC25A21Q9BQT8 299 aaPredicted RBP21.33■■□□□ 1.01
NME3-203ENST00000563367 ENY2Q9NPA8 101 aa21.33■■□□□ 1.01
NME3-203ENST00000563367 UFC1Q9Y3C8 167 aa21.33■■□□□ 1.01
NME3-203ENST00000563367 HUWE1Q7Z6Z7 4374 aaKnown RBP21.32■■□□□ 1
NME3-203ENST00000563367 ELLP55199 621 aaPredicted RBP21.32■■□□□ 1
NME3-203ENST00000563367 TXN2Q99757 166 aa21.32■■□□□ 1
NME3-203ENST00000563367 IGHV3OR16-8A0A075B7F1 116 aa21.31■■□□□ 1
NME3-203ENST00000563367 A0A0B4J2A0 478 aa21.31■■□□□ 1
NME3-203ENST00000563367 NDUFA4O00483 81 aa21.31■■□□□ 1
NME3-203ENST00000563367 NXPH3O95157 252 aa21.31■■□□□ 1
NME3-203ENST00000563367 BSXQ3C1V8 233 aa21.31■■□□□ 1
NME3-203ENST00000563367 TMEM128Q5BJH2 165 aa21.31■■□□□ 1
NME3-203ENST00000563367 NMSQ5H8A3 153 aa21.31■■□□□ 1
NME3-203ENST00000563367 GTSCR1Q86UQ5 136 aa21.31■■□□□ 1
NME3-203ENST00000563367 TMEM61Q8N0U2 210 aa21.31■■□□□ 1
NME3-203ENST00000563367 C19orf73Q9NVV2 129 aa21.31■■□□□ 1
NME3-203ENST00000563367 GAR1Q9NY12 217 aaKnown RBP21.31■■□□□ 1
NME3-203ENST00000563367 SHPKQ9UHJ6 478 aa21.31■■□□□ 1
NME3-203ENST00000563367 SULT1A3P0DMM9 295 aa21.3■■□□□ 1
NME3-203ENST00000563367 SULT1A4P0DMN0 295 aa21.3■■□□□ 1
NME3-203ENST00000563367 ANXA3P12429 323 aa21.3■■□□□ 1
NME3-203ENST00000563367 CCR6P51684 374 aa21.3■■□□□ 1
NME3-203ENST00000563367 SUB1P53999 127 aaKnown RBP eCLIP21.3■■□□□ 1
NME3-203ENST00000563367 TRIQKQ629K1 86 aa21.3■■□□□ 1
NME3-203ENST00000563367 BTNL8Q6UX41 500 aa21.3■■□□□ 1
NME3-203ENST00000563367 LGI3Q8N145 548 aa21.3■■□□□ 1
NME3-203ENST00000563367 MARC2Q969Z3 335 aa21.3■■□□□ 1
NME3-203ENST00000563367 MRPL27Q9P0M9 148 aaKnown RBP21.3■■□□□ 1
NME3-203ENST00000563367 A8MZ25 164 aa21.29■■□□□ 1
NME3-203ENST00000563367 NUPL2O15504 423 aaKnown RBP21.29■■□□□ 1
NME3-203ENST00000563367 GUCA2BQ16661 112 aa21.29■■□□□ 1
NME3-203ENST00000563367 C20orf24Q9BUV8 137 aa21.29■■□□□ 1
NME3-203ENST00000563367 ZNF207O43670 478 aaKnown RBP21.28■■□□□ 1
NME3-203ENST00000563367 INPP1P49441 399 aa21.28■■□□□ 1
NME3-203ENST00000563367 SRPXP78539 464 aa21.28■■□□□ 1
NME3-203ENST00000563367 MLANAQ16655 118 aa21.28■■□□□ 1
NME3-203ENST00000563367 ANKRD55Q3KP44 614 aa21.28■■□□□ 1
NME3-203ENST00000563367 FNDC4Q9H6D8 234 aaPredicted RBP21.28■■□□□ 1
NME3-203ENST00000563367 DAZ1Q9NQZ3 744 aaKnown RBP21.28■■□□□ 1
NME3-203ENST00000563367 LINC00854A0A1B0GVQ3 168 aa21.27■■□□□ 1
NME3-203ENST00000563367 GNG7O60262 68 aa21.27■■□□□ 1
NME3-203ENST00000563367 CD7P09564 240 aa21.27■■□□□ 1
NME3-203ENST00000563367 CD81P60033 236 aa21.27■■□□□ 1
NME3-203ENST00000563367 NEURL2Q9BR09 285 aa21.27■■□□□ 1
NME3-203ENST00000563367 HEYLQ9NQ87 328 aaPredicted RBP21.27■■□□□ 1
NME3-203ENST00000563367 MRPL36Q9P0J6 103 aaKnown RBP21.27■■□□□ 1
NME3-203ENST00000563367 U3KQK5 164 aa21.27■■□□□ 1
NME3-203ENST00000563367 CEBPZOSA8MTT3 80 aa21.26■□□□□ 0.99
NME3-203ENST00000563367 CORTO00230 105 aa21.26■□□□□ 0.99
NME3-203ENST00000563367 VAMP1P23763 118 aa21.26■□□□□ 0.99
NME3-203ENST00000563367 PPP1R1AQ13522 171 aa21.26■□□□□ 0.99
NME3-203ENST00000563367 SMCO1Q147U7 214 aa21.26■□□□□ 0.99
NME3-203ENST00000563367 RBMS2Q15434 407 aaKnown RBP21.26■□□□□ 0.99
NME3-203ENST00000563367 DUSP18Q8NEJ0 188 aa21.26■□□□□ 0.99
NME3-203ENST00000563367 NAP1L6A6NFF2 107 aa21.25■□□□□ 0.99
NME3-203ENST00000563367 SCAF4O95104 1147 aaKnown RBP21.25■□□□□ 0.99
NME3-203ENST00000563367 HTR2BP41595 481 aa21.25■□□□□ 0.99
NME3-203ENST00000563367 RELQ04864 619 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms