RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 EWSR1Q01844 656 aaKnown RBP eCLIP12.8□□□□□ -0.36
TSC2-219ENST00000563346 FUNDC2Q9BWH2 189 aa12.8□□□□□ -0.36
TSC2-219ENST00000563346 NXF2Q9GZY0 626 aaKnown RBP12.8□□□□□ -0.36
TSC2-219ENST00000563346 MAP6D1Q9H9H5 199 aa12.8□□□□□ -0.36
TSC2-219ENST00000563346 FAM25AB3EWG3 89 aa12.79□□□□□ -0.36
TSC2-219ENST00000563346 FAM25CB3EWG5 89 aa12.79□□□□□ -0.36
TSC2-219ENST00000563346 FAM25GB3EWG6 89 aa12.79□□□□□ -0.36
TSC2-219ENST00000563346 M0QYG6 137 aa12.79□□□□□ -0.36
TSC2-219ENST00000563346 PGAM2P15259 253 aa12.79□□□□□ -0.36
TSC2-219ENST00000563346 CEMP1Q6PRD7 247 aaPredicted RBP12.79□□□□□ -0.36
TSC2-219ENST00000563346 OR10C1Q96KK4 312 aa12.79□□□□□ -0.36
TSC2-219ENST00000563346 GINS3Q9BRX5 216 aa12.79□□□□□ -0.36
TSC2-219ENST00000563346 KLK5Q9Y337 293 aaPredicted RBP12.79□□□□□ -0.36
TSC2-219ENST00000563346 IGHV3OR16-13A0A075B7E8 117 aa12.78□□□□□ -0.36
TSC2-219ENST00000563346 IGHV3-74A0A0B4J1X5 117 aa12.78□□□□□ -0.36
TSC2-219ENST00000563346 SNCAP37840 140 aa12.78□□□□□ -0.36
TSC2-219ENST00000563346 RORCP51449 518 aa12.78□□□□□ -0.36
TSC2-219ENST00000563346 PAFAH1B2P68402 229 aa12.78□□□□□ -0.36
TSC2-219ENST00000563346 SPINK9Q5DT21 86 aa12.78□□□□□ -0.36
TSC2-219ENST00000563346 RNASE12Q5GAN4 147 aaKnown RBP12.78□□□□□ -0.36
TSC2-219ENST00000563346 MZT2AQ6P582 158 aa12.78□□□□□ -0.36
TSC2-219ENST00000563346 GBGT1Q8N5D6 347 aa12.78□□□□□ -0.36
TSC2-219ENST00000563346 SLC35G3Q8N808 338 aa12.78□□□□□ -0.36
TSC2-219ENST00000563346 DUSP18Q8NEJ0 188 aa12.78□□□□□ -0.36
TSC2-219ENST00000563346 MPTX1A8MV57 137 aa12.77□□□□□ -0.37
TSC2-219ENST00000563346 ATF4P18848 351 aaPredicted RBP12.77□□□□□ -0.37
TSC2-219ENST00000563346 NPBWR1P48145 328 aa12.77□□□□□ -0.37
TSC2-219ENST00000563346 AKR1C2P52895 323 aa12.77□□□□□ -0.37
TSC2-219ENST00000563346 ZNF124Q15973 351 aa12.77□□□□□ -0.37
TSC2-219ENST00000563346 IZUMO4Q1ZYL8 232 aa12.77□□□□□ -0.37
TSC2-219ENST00000563346 RNASE10Q5GAN6 216 aaKnown RBP12.77□□□□□ -0.37
TSC2-219ENST00000563346 TCF24Q7RTU0 167 aa12.77□□□□□ -0.37
TSC2-219ENST00000563346 ZNF486Q96H40 463 aaPredicted RBP12.77□□□□□ -0.37
TSC2-219ENST00000563346 ZNF414Q96IQ9 312 aa12.77□□□□□ -0.37
TSC2-219ENST00000563346 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.37
TSC2-219ENST00000563346 CSTL1Q9H114 145 aa12.77□□□□□ -0.37
TSC2-219ENST00000563346 ATG12O94817 140 aa12.76□□□□□ -0.37
TSC2-219ENST00000563346 IFNA17P01571 189 aa12.76□□□□□ -0.37
TSC2-219ENST00000563346 CD5P06127 495 aa12.76□□□□□ -0.37
TSC2-219ENST00000563346 PI3P19957 117 aa12.76□□□□□ -0.37
TSC2-219ENST00000563346 PIGPP57054 158 aa12.76□□□□□ -0.37
TSC2-219ENST00000563346 RND3P61587 244 aa12.76□□□□□ -0.37
TSC2-219ENST00000563346 ST8SIA3O43173 380 aa12.75□□□□□ -0.37
TSC2-219ENST00000563346 SUB1P53999 127 aaKnown RBP eCLIP12.75□□□□□ -0.37
TSC2-219ENST00000563346 RPL11P62913 178 aaKnown RBP12.75□□□□□ -0.37
TSC2-219ENST00000563346 FAM90A2PQ658T7 463 aa12.75□□□□□ -0.37
TSC2-219ENST00000563346 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
TSC2-219ENST00000563346 ZNF600Q6ZNG1 722 aa12.75□□□□□ -0.37
TSC2-219ENST00000563346 ARRDC1Q8N5I2 433 aa12.75□□□□□ -0.37
TSC2-219ENST00000563346 ST8SIA2Q92186 375 aa12.75□□□□□ -0.37
TSC2-219ENST00000563346 AP3S1Q92572 193 aa12.75□□□□□ -0.37
TSC2-219ENST00000563346 KLK11Q9UBX7 282 aa12.75□□□□□ -0.37
TSC2-219ENST00000563346 C3orf85A0A1B0GTC6 90 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 DNASE2O00115 360 aaPredicted RBP12.74□□□□□ -0.37
TSC2-219ENST00000563346 CORTO00230 105 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 IGKV1-5P01602 117 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 HOXA1P49639 335 aaPredicted RBP12.74□□□□□ -0.37
TSC2-219ENST00000563346 PPP5CP53041 499 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 TRIM16LQ309B1 348 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 RNASE11Q8TAA1 199 aaKnown RBP12.74□□□□□ -0.37
TSC2-219ENST00000563346 GATAD1Q8WUU5 269 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 TP53RKQ96S44 253 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 RARRES2Q99969 163 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 ENY2Q9NPA8 101 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 COPZ2Q9P299 210 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 EXTL2Q9UBQ6 330 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 BOLA1Q9Y3E2 137 aa12.74□□□□□ -0.37
TSC2-219ENST00000563346 PUS1Q9Y606 427 aaKnown RBP eCLIP12.74□□□□□ -0.37
TSC2-219ENST00000563346 FRAS1Q86XX4 4008 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 A0A0B4J293 547 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 CD3DP04234 171 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 TBPP20226 339 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 ETV6P41212 452 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 LHFPL1Q86WI0 220 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 CCDC71LQ8N9Z2 235 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 OR52I2Q8NH67 350 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 ZFAND1Q8TCF1 268 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 PHLDA1Q8WV24 401 aaPredicted RBP12.73□□□□□ -0.37
TSC2-219ENST00000563346 RRNAD1Q96FB5 475 aaKnown RBP12.73□□□□□ -0.37
TSC2-219ENST00000563346 TMEM231Q9H6L2 316 aa12.73□□□□□ -0.37
TSC2-219ENST00000563346 INS-IGF2F8WCM5 200 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 SCGB2A1O75556 95 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 DFFBO76075 338 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 TMEM50AO95807 157 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 APOHP02749 345 aaPredicted RBP12.72□□□□□ -0.37
TSC2-219ENST00000563346 SP6Q3SY56 376 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 OR11H2Q8NH07 326 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 C15orf40Q8WUR7 153 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 MS4A6AQ9H2W1 248 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 VSIRQ9H7M9 311 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 MTFP1Q9UDX5 166 aa12.72□□□□□ -0.37
TSC2-219ENST00000563346 CA1P00915 261 aaPredicted RBP12.71□□□□□ -0.37
TSC2-219ENST00000563346 P0C879 139 aa12.71□□□□□ -0.37
TSC2-219ENST00000563346 RNASE2P10153 161 aaKnown RBP12.71□□□□□ -0.37
TSC2-219ENST00000563346 ZNF182P17025 639 aaPredicted RBP12.71□□□□□ -0.37
TSC2-219ENST00000563346 NPPCP23582 126 aa12.71□□□□□ -0.37
TSC2-219ENST00000563346 OPRK1P41145 380 aa12.71□□□□□ -0.37
TSC2-219ENST00000563346 DEFB131AP59861 70 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms