RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 S100A10P60903 97 aa14.6□□□□□ -0.07
RAB40C-207ENST00000563109 BSXQ3C1V8 233 aa14.6□□□□□ -0.07
RAB40C-207ENST00000563109 C2orf83Q53S99 150 aa14.6□□□□□ -0.07
RAB40C-207ENST00000563109 FAM209BQ5JX69 171 aa14.6□□□□□ -0.07
RAB40C-207ENST00000563109 C8orf86Q6ZUL3 223 aa14.6□□□□□ -0.07
RAB40C-207ENST00000563109 NMES1Q9C002 83 aa14.6□□□□□ -0.07
RAB40C-207ENST00000563109 LSM5Q9Y4Y9 91 aaKnown RBP14.6□□□□□ -0.07
RAB40C-207ENST00000563109 DMRT1Q9Y5R6 373 aa14.6□□□□□ -0.07
RAB40C-207ENST00000563109 L7N2F9 121 aa14.59□□□□□ -0.07
RAB40C-207ENST00000563109 VAMP2P63027 116 aa14.59□□□□□ -0.07
RAB40C-207ENST00000563109 C11orf87Q6NUJ2 197 aa14.59□□□□□ -0.07
RAB40C-207ENST00000563109 C18orf65Q6ZTR6 163 aa14.59□□□□□ -0.07
RAB40C-207ENST00000563109 PINX1Q96BK5 328 aaKnown RBP14.59□□□□□ -0.07
RAB40C-207ENST00000563109 RAB40CQ96S21 281 aa14.59□□□□□ -0.07
RAB40C-207ENST00000563109 RCL1Q9Y2P8 373 aaKnown RBP14.59□□□□□ -0.07
RAB40C-207ENST00000563109 TENM1Q9UKZ4 2725 aa14.59□□□□□ -0.07
RAB40C-207ENST00000563109 K7EPK0 472 aa14.58□□□□□ -0.08
RAB40C-207ENST00000563109 PVALBP20472 110 aaPredicted RBP14.58□□□□□ -0.08
RAB40C-207ENST00000563109 RRAS2P62070 204 aaPredicted RBP14.58□□□□□ -0.08
RAB40C-207ENST00000563109 RAB11AP62491 216 aa14.58□□□□□ -0.08
RAB40C-207ENST00000563109 RUNX1Q01196 453 aa14.58□□□□□ -0.08
RAB40C-207ENST00000563109 VN1R17PQ8TDU5 208 aa14.58□□□□□ -0.08
RAB40C-207ENST00000563109 PAIP2BQ9ULR5 123 aaKnown RBP14.58□□□□□ -0.08
RAB40C-207ENST00000563109 TRBV7-1A0A0A6YYK4 115 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 RPS10-NUDT3A0A1W2PQS6 291 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 MFSD2BA6NFX1 497 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 I3L521 148 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 MT-CO2P00403 227 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 PF4P02776 101 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 OR8U8P0C7N1 319 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 OPRK1P41145 380 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 H2BFSP57053 126 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 RAB32Q13637 225 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 FCN2Q15485 313 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 SPANXN5Q5MJ07 72 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 PVRIGQ6DKI7 326 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 ZNF343Q6P1L6 599 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 RNASEH2CQ8TDP1 164 aaKnown RBP14.57□□□□□ -0.08
RAB40C-207ENST00000563109 SMIM8Q96KF7 97 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 PSENENQ9NZ42 101 aa14.57□□□□□ -0.08
RAB40C-207ENST00000563109 STRAPQ9Y3F4 350 aaKnown RBP14.57□□□□□ -0.08
RAB40C-207ENST00000563109 STAB1Q9NY15 2570 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 IGHV3-21A0A0B4J1V1 117 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 ANKRD34BA5PLL1 514 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 H3BP45 60 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 K7EIM0 57 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 IGHV3-23P01764 117 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 IFNA4P05014 189 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 TAS2R30P59541 319 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 DEFB136Q30KP8 78 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 DPF1Q92782 380 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 C21orf62Q9NYP8 219 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 PEF1Q9UBV8 284 aaKnown RBP14.56□□□□□ -0.08
RAB40C-207ENST00000563109 S4R3C0 116 aa14.56□□□□□ -0.08
RAB40C-207ENST00000563109 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.55□□□□□ -0.08
RAB40C-207ENST00000563109 I3L2K1 104 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 CCL24O00175 119 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 RLN2P04090 185 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 HSPB1P04792 205 aaKnown RBP14.55□□□□□ -0.08
RAB40C-207ENST00000563109 PET100P0DJ07 73 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 ZNF616Q08AN1 781 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 IL15RAQ13261 267 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 LRRC37A5PQ49AS3 106 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 ETFRF1Q6IPR1 90 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 OR11H1Q8NG94 326 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 OR1N2Q8NGR9 330 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 SCARB1Q8WTV0 552 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 RAX2Q96IS3 184 aa14.55□□□□□ -0.08
RAB40C-207ENST00000563109 RANGRFQ9HD47 186 aaPredicted RBP14.55□□□□□ -0.08
RAB40C-207ENST00000563109 C15orf62A8K5M9 175 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 LINC01619G3V211 115 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 TSC22D2O75157 780 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 TSPAN15O95858 294 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 CXCL3P19876 107 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 MYCNOSP40205 109 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 MFAP4P55083 255 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 Q56UQ5 140 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 ACSM6Q6P461 480 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 UBAC2Q8NBM4 344 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 OR11H7Q8NGC8 314 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 ZNF502Q8TBZ5 544 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 TMEM170AQ8WVE7 144 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 ASB13Q8WXK3 278 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 CCDC140Q96MF4 163 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 OR4C12Q96R67 309 aa14.54□□□□□ -0.08
RAB40C-207ENST00000563109 GAR1Q9NY12 217 aaKnown RBP14.54□□□□□ -0.08
RAB40C-207ENST00000563109 ANK2Q01484 3957 aa14.53□□□□□ -0.08
RAB40C-207ENST00000563109 SCGB2A1O75556 95 aa14.53□□□□□ -0.08
RAB40C-207ENST00000563109 ZP3P21754 424 aa14.53□□□□□ -0.08
RAB40C-207ENST00000563109 BCAP31P51572 246 aa14.53□□□□□ -0.08
RAB40C-207ENST00000563109 CLEC19AQ6UXS0 136 aa14.53□□□□□ -0.08
RAB40C-207ENST00000563109 ETV3LQ6ZN32 361 aa14.53□□□□□ -0.08
RAB40C-207ENST00000563109 PPP1R1CQ8WVI7 109 aa14.53□□□□□ -0.08
RAB40C-207ENST00000563109 DUX3Q96PT4 197 aa14.53□□□□□ -0.08
RAB40C-207ENST00000563109 ATP6V0BQ99437 205 aa14.53□□□□□ -0.08
RAB40C-207ENST00000563109 ZNF436Q9C0F3 470 aaPredicted RBP14.53□□□□□ -0.08
RAB40C-207ENST00000563109 IGHV4OR15-8A0A075B7B6 117 aa14.52□□□□□ -0.09
RAB40C-207ENST00000563109 A0A087WW49 117 aa14.52□□□□□ -0.09
RAB40C-207ENST00000563109 DEDDO75618 318 aa14.52□□□□□ -0.09
RAB40C-207ENST00000563109 TMEM50AO95807 157 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms