RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PRSS3P35030 304 aa9.53□□□□□ -0.88
SF3B3-202ENST00000562722 TMEM187Q14656 261 aa9.53□□□□□ -0.88
SF3B3-202ENST00000562722 LPCAT3Q6P1A2 487 aa9.53□□□□□ -0.88
SF3B3-202ENST00000562722 TBC1D26Q86UD7 250 aa9.53□□□□□ -0.88
SF3B3-202ENST00000562722 CADM3Q8N126 398 aa9.53□□□□□ -0.88
SF3B3-202ENST00000562722 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
SF3B3-202ENST00000562722 ANAPC10Q9UM13 185 aa9.53□□□□□ -0.88
SF3B3-202ENST00000562722 IGHV3-66A0A0C4DH42 116 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 CD5P06127 495 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 TGFBR1P36897 503 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 ERHP84090 104 aaKnown RBP9.52□□□□□ -0.89
SF3B3-202ENST00000562722 PRCDQ00LT1 54 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 SPINK9Q5DT21 86 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 LEMD1Q68G75 181 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 C2CD4CQ8TF44 421 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 ST8SIA2Q92186 375 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 MRGPRFQ96AM1 343 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 KRTAP17-1Q9BYP8 105 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 MS4A6AQ9H2W1 248 aa9.52□□□□□ -0.89
SF3B3-202ENST00000562722 DFFBO76075 338 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 ATP6V1G2O95670 118 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 NAT1P18440 290 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 SNCAP37840 140 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 NPBWR1P48145 328 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 DEFB131AP59861 70 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 LSM3P62310 102 aaKnown RBP9.51□□□□□ -0.89
SF3B3-202ENST00000562722 FAM90A2PQ658T7 463 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 TOMM20LQ6UXN7 152 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 STHQ8IWL8 128 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 ZNF114Q8NC26 417 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 DUSP18Q8NEJ0 188 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 ZNF414Q96IQ9 312 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 SEC22AQ96IW7 307 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 RABAC1Q9UI14 185 aa9.51□□□□□ -0.89
SF3B3-202ENST00000562722 IGLL5B9A064 214 aa9.5□□□□□ -0.89
SF3B3-202ENST00000562722 APOHP02749 345 aaPredicted RBP9.5□□□□□ -0.89
SF3B3-202ENST00000562722 RPS19P39019 145 aaKnown RBP9.5□□□□□ -0.89
SF3B3-202ENST00000562722 HSPE1P61604 102 aaKnown RBP9.5□□□□□ -0.89
SF3B3-202ENST00000562722 LYSMD2Q8IV50 215 aa9.5□□□□□ -0.89
SF3B3-202ENST00000562722 SLC35G3Q8N808 338 aa9.5□□□□□ -0.89
SF3B3-202ENST00000562722 TMEM231Q9H6L2 316 aa9.5□□□□□ -0.89
SF3B3-202ENST00000562722 FAM212BQ9NTI7 297 aaPredicted RBP9.5□□□□□ -0.89
SF3B3-202ENST00000562722 PUS1Q9Y606 427 aaKnown RBP eCLIP9.5□□□□□ -0.89
SF3B3-202ENST00000562722 SMIM31A0A1B0GVY4 71 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 IGKV1-39P01597 117 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 IGKV1D-39P04432 117 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 PRR20EP86478 221 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 PRR20CP86479 221 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 PRR20DP86480 221 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 PRR20BP86481 221 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 PRR20AP86496 221 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 ZNF600Q6ZNG1 722 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 SNX29P2Q8IUI4 249 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 CENPSQ8N2Z9 138 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 LILRB2Q8N423 598 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 PDCD10Q9BUL8 212 aa9.49□□□□□ -0.89
SF3B3-202ENST00000562722 IFNA17P01571 189 aa9.48□□□□□ -0.89
SF3B3-202ENST00000562722 PGAM2P15259 253 aa9.48□□□□□ -0.89
SF3B3-202ENST00000562722 HOXA1P49639 335 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-202ENST00000562722 AKR1C2P52895 323 aa9.48□□□□□ -0.89
SF3B3-202ENST00000562722 TCTAP57738 103 aa9.48□□□□□ -0.89
SF3B3-202ENST00000562722 IZUMO4Q1ZYL8 232 aa9.48□□□□□ -0.89
SF3B3-202ENST00000562722 FAM24BQ8N5W8 94 aa9.48□□□□□ -0.89
SF3B3-202ENST00000562722 STXBP6Q8NFX7 210 aa9.48□□□□□ -0.89
SF3B3-202ENST00000562722 GPX8Q8TED1 209 aa9.48□□□□□ -0.89
SF3B3-202ENST00000562722 VSIRQ9H7M9 311 aa9.48□□□□□ -0.89
SF3B3-202ENST00000562722 COMMD3Q9UBI1 195 aa9.48□□□□□ -0.89
SF3B3-202ENST00000562722 TRAV2A0A0B4J234 112 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 A0A1W2PS18 150 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 C11orf94C9JXX5 98 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 SCGB2A1O75556 95 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 NPPCP23582 126 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 RCVRNP35243 200 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 SUB1P53999 127 aaKnown RBP eCLIP9.47□□□□□ -0.892e-7■□□□□ 11.2
SF3B3-202ENST00000562722 KCTD21Q4G0X4 260 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 NARS2Q96I59 477 aaKnown RBP9.47□□□□□ -0.89
SF3B3-202ENST00000562722 METTL26Q96S19 204 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 SCPEP1Q9HB40 452 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 VCX3AQ9NNX9 186 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 ENY2Q9NPA8 101 aa9.47□□□□□ -0.89
SF3B3-202ENST00000562722 HECTD4Q9Y4D8 3996 aa9.46□□□□□ -0.89
SF3B3-202ENST00000562722 IGHV4-28A0A0C4DH34 117 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 A0A1B0GU03 582 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 M0QYG6 137 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 CORTO00230 105 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 ATG12O94817 140 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 TMEM50AO95807 157 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 ZNF688P0C7X2 276 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 OPRK1P41145 380 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 UCP3P55916 312 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 TRIM16LQ309B1 348 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 RNASE12Q5GAN4 147 aaKnown RBP9.46□□□□□ -0.9
SF3B3-202ENST00000562722 Q8NAQ8 132 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 RNASE11Q8TAA1 199 aaKnown RBP9.46□□□□□ -0.9
SF3B3-202ENST00000562722 TMEM230Q96A57 120 aa9.46□□□□□ -0.9
SF3B3-202ENST00000562722 KNCNA6PVL3 124 aa9.45□□□□□ -0.9
SF3B3-202ENST00000562722 IGKV1-5P01602 117 aa9.45□□□□□ -0.9
SF3B3-202ENST00000562722 PI3P19957 117 aa9.45□□□□□ -0.9
SF3B3-202ENST00000562722 HLA-DMBP28068 263 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms