RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ANXA7P20073 488 aaKnown RBP10.54□□□□□ -0.72
TPM1-230ENST00000561266 VAMP1P23763 118 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 SPCS3P61009 180 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 IFITM3Q01628 133 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 BSXQ3C1V8 233 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 GPHB5Q86YW7 130 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 LGI3Q8N145 548 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 OR4C12Q96R67 309 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 FNDC4Q9H6D8 234 aaPredicted RBP10.54□□□□□ -0.72
TPM1-230ENST00000561266 PTTG2Q9NZH5 202 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 THYN1Q9P016 225 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 TBC1D24Q9ULP9 559 aa10.54□□□□□ -0.72
TPM1-230ENST00000561266 ZNF256Q9Y2P7 627 aaPredicted RBP10.54□□□□□ -0.72
TPM1-230ENST00000561266 LSM4Q9Y4Z0 139 aaKnown RBP10.54□□□□□ -0.72
TPM1-230ENST00000561266 IGHV3OR16-8A0A075B7F1 116 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 C9orf170A2RU37 121 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 C2orf70A6NJV1 201 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 LYRM1O43325 122 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 TGOLN2O43493 480 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 PITX3O75364 302 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 HOXA1P49639 335 aaPredicted RBP10.53□□□□□ -0.72
TPM1-230ENST00000561266 ERHP84090 104 aaKnown RBP10.53□□□□□ -0.72
TPM1-230ENST00000561266 TM4SF20Q53R12 229 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 DEFB121Q5J5C9 76 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 LRTM2Q8N967 370 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 PINX1Q96BK5 328 aaKnown RBP10.53□□□□□ -0.72
TPM1-230ENST00000561266 ELOVL1Q9BW60 279 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 C21orf62Q9NYP8 219 aa10.53□□□□□ -0.72
TPM1-230ENST00000561266 TMEM213A2RRL7 107 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 MPTX1A8MV57 137 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 LGALS9O00182 355 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 CTSGP08311 255 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 SULT1A3P0DMM9 295 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 SULT1A4P0DMN0 295 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 SMCO1Q147U7 214 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 FAM209BQ5JX69 171 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 PLET1Q6UQ28 207 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 LINC00299Q6ZSB3 139 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 UBAC2Q8NBM4 344 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 OR52B4Q8NGK2 314 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 C7orf50Q9BRJ6 194 aaKnown RBP10.52□□□□□ -0.73
TPM1-230ENST00000561266 PDCD10Q9BUL8 212 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 CCDC32Q9BV29 185 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 ZNF436Q9C0F3 470 aaPredicted RBP10.52□□□□□ -0.73
TPM1-230ENST00000561266 RBKSQ9H477 322 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 COL7A1Q02388 2944 aa10.52□□□□□ -0.73
TPM1-230ENST00000561266 ZNF320A2RRD8 509 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 ADAP1O75689 374 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 LY86O95711 162 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 HOXB5P09067 269 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 OR4E1P0C645 316 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 ANXA3P12429 323 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 FOLR2P14207 255 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 GP9P14770 177 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 UBE2MP61081 183 aaKnown RBP10.51□□□□□ -0.73
TPM1-230ENST00000561266 TNFRSF9Q07011 255 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 DHRS2Q13268 280 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 TATDN3Q17R31 274 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 GGNBP1Q5YKI7 109 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 Q8N1Y9 231 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 OR1L6Q8NGR2 347 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 BATF3Q9NR55 127 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 SIGLEC8Q9NYZ4 499 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 HSPB7Q9UBY9 170 aa10.51□□□□□ -0.73
TPM1-230ENST00000561266 ZNF785A8K8V0 405 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 CENPXA8MT69 81 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 CEBPZOSA8MTT3 80 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 CYB5BO43169 146 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 TCRBP04435 133 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 SNCAP37840 140 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 SRPXP78539 464 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 DEFB114Q30KQ6 69 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 CD300EQ496F6 205 aaPredicted RBP10.5□□□□□ -0.73
TPM1-230ENST00000561266 Q56UQ5 140 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 LYG2Q86SG7 212 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 S100ZQ8WXG8 99 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 BSCL2Q96G97 398 aaPredicted RBP10.5□□□□□ -0.73
TPM1-230ENST00000561266 HEYLQ9NQ87 328 aaPredicted RBP10.5□□□□□ -0.73
TPM1-230ENST00000561266 PEMTQ9UBM1 199 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 MLXQ9UH92 298 aa10.5□□□□□ -0.73
TPM1-230ENST00000561266 TRAV6A0A075B6T7 132 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 A0A1B0GU03 582 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 DUXBA0A1W2PPF3 345 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 A8MWP6 167 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 ZNF207O43670 478 aaKnown RBP10.49□□□□□ -0.73
TPM1-230ENST00000561266 CBLN1P23435 193 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 FCGR2BP31994 310 aaPredicted RBP10.49□□□□□ -0.73
TPM1-230ENST00000561266 MFAP4P55083 255 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 FAM106AQ4KMX7 169 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 C2orf83Q53S99 150 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 TMEM190Q8WZ59 177 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 C20orf85Q9H1P6 137 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 ENY2Q9NPA8 101 aa10.49□□□□□ -0.73
TPM1-230ENST00000561266 TMEM50AO95807 157 aa10.48□□□□□ -0.73
TPM1-230ENST00000561266 C8orf88P0DMB2 117 aa10.48□□□□□ -0.73
TPM1-230ENST00000561266 UXS1Q8NBZ7 420 aa10.48□□□□□ -0.73
TPM1-230ENST00000561266 OR1S1Q8NH92 325 aa10.48□□□□□ -0.73
TPM1-230ENST00000561266 ATP6V0BQ99437 205 aa10.48□□□□□ -0.73
TPM1-230ENST00000561266 SEC22CQ9BRL7 303 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms