RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MSMBP08118 114 aa10.27□□□□□ -0.76
SNX1-211ENST00000560829 MLANAQ16655 118 aa10.27□□□□□ -0.76
SNX1-211ENST00000560829 GUCA2BQ16661 112 aa10.27□□□□□ -0.76
SNX1-211ENST00000560829 FAM122CQ6P4D5 195 aa10.27□□□□□ -0.76
SNX1-211ENST00000560829 STPG3Q8N7X2 389 aa10.27□□□□□ -0.76
SNX1-211ENST00000560829 F11RQ9Y624 299 aaKnown RBP10.27□□□□□ -0.76
SNX1-211ENST00000560829 ARHGAP32A7KAX9 2087 aa10.27□□□□□ -0.76
SNX1-211ENST00000560829 A0A096LNT2 108 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 REG1AP05451 166 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 LINC00869P0C866 280 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 FAM106CPP0CH98 169 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 BCL2P10415 239 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 BRS3P32247 399 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 MFAP2P55001 183 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 FGF8P55075 233 aaPredicted RBP10.27□□□□□ -0.77
SNX1-211ENST00000560829 HAGHQ16775 308 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 GCSAMLQ5JQS6 135 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 ATRAIDQ6UW56 229 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 SSMEM1Q8WWF3 244 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 GNG13Q9P2W3 67 aa10.27□□□□□ -0.77
SNX1-211ENST00000560829 KMT2BQ9UMN6 2715 aaPredicted RBP10.27□□□□□ -0.77
SNX1-211ENST00000560829 TACC2O95359 2948 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 TNCP24821 2201 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 LRRK2Q5S007 2527 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 B4DSR2 109 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 TSPAN9O75954 239 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 IFNA1P01562 189 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 SRP19P09132 144 aaKnown RBP10.26□□□□□ -0.77
SNX1-211ENST00000560829 TMEM11P17152 192 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 ETFRF1Q6IPR1 90 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 ZNF562Q6V9R5 426 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 THAP8Q8NA92 274 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 OR2T6Q8NHC8 308 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 ASH1LQ9NR48 2969 aaKnown RBP10.26□□□□□ -0.77
SNX1-211ENST00000560829 BEX4Q9NWD9 120 aaPredicted RBP10.26□□□□□ -0.77
SNX1-211ENST00000560829 FBN2P35556 2912 aa10.26□□□□□ -0.77
SNX1-211ENST00000560829 AKAP6Q13023 2319 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 IGHV1-69DA0A0B4J2H0 117 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 NDUFS6O75380 124 aaKnown RBP10.25□□□□□ -0.77
SNX1-211ENST00000560829 SNAPINO95295 136 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 IGHV1-69P01742 117 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 PLA2G2AP14555 144 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 CTRB1P17538 263 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 COL8A1P27658 744 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 OR10J1P30954 320 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 TAGLN2P37802 199 aaKnown RBP10.25□□□□□ -0.77
SNX1-211ENST00000560829 CTRB2Q6GPI1 263 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 RBMS3Q6XE24 437 aaKnown RBP10.25□□□□□ -0.77
SNX1-211ENST00000560829 LRRC75A-AS1Q8N1F1 130 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 NKX6-2Q9C056 277 aaPredicted RBP10.25□□□□□ -0.77
SNX1-211ENST00000560829 C1RLQ9NZP8 487 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 A0A1W2PPV4 95 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 ZFP92A6NM28 416 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 CNIH1O95406 144 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 STAG3L2P0CL84 134 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 STAG3L3P0CL85 134 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 GATA3P23771 443 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 KRTAP10-9P60411 292 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 FXYD3Q14802 87 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 RXFP4Q8TDU9 374 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 ACY3Q96HD9 319 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 VAX2Q9UIW0 290 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 DMRT1Q9Y5R6 373 aa10.25□□□□□ -0.77
SNX1-211ENST00000560829 TRAV20A0A0B4J274 112 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 EIF3GO75821 320 aaKnown RBP eCLIP10.24□□□□□ -0.77
SNX1-211ENST00000560829 DEFA4P12838 97 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 PSMB3P49720 205 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 CX3CL1P78423 397 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 SLC35E3Q7Z769 313 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 Q8N9W7 124 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 TMEM116Q8NCL8 245 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 OR1L6Q8NGR2 347 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 NPIPB3Q92617 1050 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 C19orf24Q9BVV8 132 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 MANBALQ9NQG1 85 aa10.24□□□□□ -0.77
SNX1-211ENST00000560829 IGKV1D-37A0A075B6S9 117 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 NCBP2LA6PVI3 153 aaKnown RBP10.23□□□□□ -0.77
SNX1-211ENST00000560829 J3QKU1 62 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 HMGB3O15347 200 aaKnown RBP10.23□□□□□ -0.77
SNX1-211ENST00000560829 RHOBP62745 196 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 DEFB113Q30KQ7 82 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 FAM120AOSQ5T036 256 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 CYP2G1PQ6ZSU1 146 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 MISP3Q96FF7 219 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 MEGF9Q9H1U4 602 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 MRPL36Q9P0J6 103 aaKnown RBP10.23□□□□□ -0.77
SNX1-211ENST00000560829 UTP20O75691 2785 aaKnown RBP10.23□□□□□ -0.77
SNX1-211ENST00000560829 TRAV40A0A0B4J280 105 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 TCRBV4S1A1TA0A5B7 111 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 HLA-DRB1P01911 266 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 APELAP0DMC3 54 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 SELENOTP62341 195 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 SOHLH1Q5JUK2 328 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 C19orf35Q6ZS72 473 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 CLRN3Q8NCR9 226 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 ABHD5Q8WTS1 349 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 ARPC1AQ92747 370 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 SLC25A33Q9BSK2 321 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 WNT10AQ9GZT5 417 aa10.23□□□□□ -0.77
SNX1-211ENST00000560829 TMPRSS5Q9H3S3 457 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms