RNA–Protein interactions for RNA: ENST00000560744.1

AP001007.3-201, humanhuman

TSL 5 BASIC

Gene AP001007.3, Length 356 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001007.3-201ENST00000560744 MAP1LC3B2A6NCE7 125 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 MARCH11A6NNE9 402 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 M0R036 132 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 M0R1W7 72 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 AP4M1O00189 453 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 NPFFO15130 113 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 SPINT2O43291 252 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 KBTBD11O94819 623 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 OR2C1O95371 312 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 HPRT1P00492 218 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 IFNA1P01562 189 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 HOXA5P20719 270 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 SSTR5P35346 364 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 G6PCP35575 357 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 AKR1C3P42330 323 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 IER3P46695 156 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 ERVFRD-1P60508 538 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 B2MP61769 119 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 SNRPEP62304 92 aaKnown RBP4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 C17orf58Q2M2W7 97 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 Q3ZCU0 254 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 TMEM200BQ69YZ2 307 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 HCP5Q6MZN7 132 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 FAM53AQ6NSI3 398 aaPredicted RBP4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 C1orf122Q6ZSJ8 110 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 TCF23Q7RTU1 214 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 FAM24BQ8N5W8 94 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 TMEM86BQ8N661 226 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 SGMS2Q8NHU3 365 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 PPP1R35Q8TAP8 253 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 MRGPRDQ8TDS7 321 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 DTD1Q8TEA8 209 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 SSMEM1Q8WWF3 244 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 C12orf57Q99622 126 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 NPCDR1Q9BY65 106 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 MAP1LC3BQ9GZQ8 125 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 FAM234AQ9H0X4 552 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 MANBALQ9NQG1 85 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 OR6C3Q9NZP0 311 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 C1RLQ9NZP8 487 aa4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 LSM4Q9Y4Z0 139 aaKnown RBP4.84□□□□□ -1.63
AP001007.3-201ENST00000560744 SMCO3A2RU48 225 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 IFITM10A6NMD0 228 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 INS-IGF2F8WCM5 200 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 NXPH3O95157 252 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 NDUFA7O95182 113 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 KRASP01116 189 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 IFNA17P01571 189 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 OPN1MWP04001 364 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 TYMSP04818 313 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 PFN1P07737 140 aaKnown RBP4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 CXCL1P09341 107 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 FBP1P09467 338 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 OR9G9P0C7N8 305 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 OPN1MW2P0DN77 364 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 OPN1MW3P0DN78 364 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 CCL3L1P16619 93 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 SAA4P35542 130 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 RAB7AP51149 207 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 UBE2E1P51965 193 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 SPCS3P61009 180 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 RPL31P62899 125 aaKnown RBP4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 MEF2BQ02080 365 aaPredicted RBP4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 SSX2Q16385 188 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 BSXQ3C1V8 233 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 COA6Q5JTJ3 125 aaKnown RBP4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 SPANXN5Q5MJ07 72 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 NCR3LG1Q68D85 454 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 LILRB2Q8N423 598 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 C11orf42Q8N5U0 333 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 OR10P1Q8NGE3 313 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 OR10A7Q8NGE5 316 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 OR4F5Q8NH21 305 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 RNASE11Q8TAA1 199 aaKnown RBP4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 UBALD1Q8TB05 177 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 ZNF596Q8TC21 504 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 C2CD4CQ8TF44 421 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 TMEM170AQ8WVE7 144 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 TCTEX1D2Q8WW35 142 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 R3HDM4Q96D70 268 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 AJUBAQ96IF1 538 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 TXNDC17Q9BRA2 123 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 C20orf24Q9BUV8 137 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 RAB9BQ9NP90 201 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 TMEM14BQ9NUH8 114 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 GFOD1Q9NXC2 390 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 ZNRD1Q9P1U0 126 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 GNG13Q9P2W3 67 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 NAT8Q9UHE5 227 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 FOXA2Q9Y261 457 aaPredicted RBP4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 PUS1Q9Y606 427 aaKnown RBP eCLIP4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 ARL2-SNX15V9GYD0 113 aa4.83□□□□□ -1.64
AP001007.3-201ENST00000560744 KBTBD11-OT1A0A1B0GTJ5 212 aa4.82□□□□□ -1.64
AP001007.3-201ENST00000560744 A0A1B0GUS0 222 aa4.82□□□□□ -1.64
AP001007.3-201ENST00000560744 UBE2L5PA0A1B0GUS4 154 aa4.82□□□□□ -1.64
AP001007.3-201ENST00000560744 CLPSL1A2RUU4 121 aa4.82□□□□□ -1.64
AP001007.3-201ENST00000560744 C15orf61A6NNL5 157 aa4.82□□□□□ -1.64
AP001007.3-201ENST00000560744 YIF1AO95070 293 aa4.82□□□□□ -1.64
AP001007.3-201ENST00000560744 NQO2P16083 231 aa4.82□□□□□ -1.64
AP001007.3-201ENST00000560744 COX7A1P24310 79 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms