RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TFF3Q07654 80 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 EIF4EBP1Q13541 118 aaPredicted RBP7.08□□□□□ -1.28
CCDC33-209ENST00000560565 SMIM21Q3B7S5 101 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 ZNF718Q3SXZ3 478 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 C12orf54Q6X4T0 127 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 Q6ZT83 130 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 FAM231DQ6ZW35 169 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 C9orf106Q8NAJ2 232 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 OR4P4Q8NGL7 312 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 OR1K1Q8NGR3 316 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 OR4S2Q8NH73 311 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 ST20Q9HBF5 79 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 OBP2BQ9NPH6 170 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 CLN8Q9UBY8 286 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 COX11Q9Y6N1 276 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 CCDC168Q8NDH2 2452 aa7.08□□□□□ -1.28
CCDC33-209ENST00000560565 HCFC1P51610 2035 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 IGHV2-26A0A0B4J1V2 119 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 C15orf62A8K5M9 175 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 TCF21O43680 179 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 HSBP1O75506 76 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 NPSP0C0P6 89 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 HIST1H1EP10412 219 aaKnown RBP7.07□□□□□ -1.28
CCDC33-209ENST00000560565 HOXB4P17483 251 aaPredicted RBP7.07□□□□□ -1.28
CCDC33-209ENST00000560565 CBLN1P23435 193 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 CEACAM8P31997 349 aaPredicted RBP7.07□□□□□ -1.28
CCDC33-209ENST00000560565 KIR2DL2P43627 348 aaPredicted RBP7.07□□□□□ -1.28
CCDC33-209ENST00000560565 GPR12P47775 334 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 ATP5G3P48201 142 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 EDDM3BP56851 147 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 ZNF816Q0VGE8 651 aaPredicted RBP7.07□□□□□ -1.28
CCDC33-209ENST00000560565 KLF5Q13887 457 aaPredicted RBP7.07□□□□□ -1.28
CCDC33-209ENST00000560565 CLEC12BQ2HXU8 276 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 SSX8Q7RTT4 187 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 PRR18Q8N4B5 295 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 RPRMLQ8N4K4 120 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 PIP4P2Q8N4L2 257 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 STXBP6Q8NFX7 210 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 OR4C5Q8NGB2 326 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 OCC1Q8TAD7 63 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 BCL2L2Q92843 193 aaPredicted RBP7.07□□□□□ -1.28
CCDC33-209ENST00000560565 S1PR3Q99500 378 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 GGTLC1Q9BX51 225 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 PRNDQ9UKY0 176 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 PROCRQ9UNN8 238 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 FAM215AQ9Y5M1 114 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 MTORP42345 2549 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 HIVEP1P15822 2718 aa7.07□□□□□ -1.28
CCDC33-209ENST00000560565 SCO2A0A1W2PP80 73 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 SMIM27A0A1W2PRY6 76 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 IQCF6A8MYZ5 107 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 K7ERU9 68 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 HYPMO75409 117 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 CRYAAP02489 173 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 PPBPP02775 128 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 PATE4P0C8F1 98 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 NPPCP23582 126 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 WNT5AP41221 380 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 CDSNQ15517 529 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 PRSS8Q16651 343 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 SPATA46Q5T0L3 261 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 IBA57Q5T440 356 aaKnown RBP7.06□□□□□ -1.28
CCDC33-209ENST00000560565 TREML4Q6UXN2 200 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 C20orf204Q6ZNR8 217 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 FAM169BQ8N8A8 192 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 CNEP1R1Q8N9A8 125 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 OR1L1Q8NH94 360 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 CHCHD1Q96BP2 118 aaKnown RBP7.06□□□□□ -1.28
CCDC33-209ENST00000560565 CYYR1Q96J86 154 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 CXXC4Q9H2H0 198 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 C12orf49Q9H741 205 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 HES4Q9HCC6 221 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 ZNF257Q9Y2Q1 563 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 V9GYV3 84 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 MED13LQ71F56 2210 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 AKAP6Q13023 2319 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 PLCE1Q9P212 2302 aa7.06□□□□□ -1.28
CCDC33-209ENST00000560565 ABCA4P78363 2273 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 TRAV38-1A0A0B4J264 116 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 A0A0G2JNJ9 132 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 GRIFINA4D1Z8 144 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 C12orf77C9JDV5 145 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 CGAP01215 116 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 IGHV3-9P01782 118 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 HLA-DRB1P01911 266 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 HBZP02008 142 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 COX6B1P14854 86 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 IGHV1-2P23083 117 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 CA6P23280 308 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 TSPOP30536 169 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 HOXC12P31275 282 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 PPOXP50336 477 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 C3orf36Q3SXR2 165 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 LRRC10Q5BKY1 277 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 MRPL54Q6P161 138 aaKnown RBP7.05□□□□□ -1.28
CCDC33-209ENST00000560565 SEM1Q6ZVN7 128 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 OR8I2Q8N0Y5 310 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 ZNF439Q8NDP4 499 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 OR1L4Q8NGR5 311 aa7.05□□□□□ -1.28
CCDC33-209ENST00000560565 GATAD1Q8WUU5 269 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms