RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 AADACL3Q5VUY0 350 aa7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 TMEM17Q86X19 198 aa7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 STHQ8IWL8 128 aa7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 SAMD12Q8N8I0 201 aa7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 LGALS14Q8TCE9 139 aa7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 GIMAP1Q8WWP7 306 aa7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 SRSF8Q9BRL6 282 aaKnown RBP7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 SMPXQ9UHP9 88 aa7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 KLK9Q9UKQ9 250 aa7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 APLNQ9ULZ1 77 aa7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 MUC4Q99102 2169 aa7.68□□□□□ -1.18
CDC42BPB-207ENST00000560492 IGHV7-4-1A0A0J9YVY3 117 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 M0R2N4 97 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 CTDSP2O14595 271 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 CHEK1O14757 476 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 HPGDSO60760 199 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 SNAPC5O75971 98 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 MED14OSP0DP75 135 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 PTHLHP12272 177 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 EIF4EBP1Q13541 118 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 UBE2NLQ5JXB2 153 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 LEMD1Q68G75 181 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 THOC7Q6I9Y2 204 aaKnown RBP7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 TCF24Q7RTU0 167 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 HSD17B13Q7Z5P4 300 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 GVQW1Q8N7I0 195 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 OR1L8Q8NGR8 309 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 SCARB1Q8WTV0 552 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 MISP3Q96FF7 219 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 DIRAS2Q96HU8 199 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 ETV7Q9Y603 341 aa7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 F11RQ9Y624 299 aaKnown RBP7.67□□□□□ -1.18
CDC42BPB-207ENST00000560492 IGHV4-4A0A075B6R2 117 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 TRAV10A0A0B4J240 114 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 TEX50A0A1B0GTY4 177 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 PRSS29PA6NIE9 313 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 ST8SIA3O43173 380 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 RBFOX2O43251 390 aaKnown RBP eCLIP7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 SCGNO76038 276 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 PPYP01298 95 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 HLA-DMBP28068 263 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 TNFSF8P32971 234 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 SCAND1P57086 179 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 DEFB131AP59861 70 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 HERV-K104P61576 105 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 WT1-ASQ06250 92 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 ZBTB34Q8NCN2 500 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 BEST4Q8NFU0 473 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 LSM10Q969L4 123 aaKnown RBP7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 GINS3Q9BRX5 216 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 RABAC1Q9UI14 185 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 NSG2Q9Y328 171 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 OR51B2Q9Y5P1 312 aa7.66□□□□□ -1.18
CDC42BPB-207ENST00000560492 TRAV14DV4A0A0A6YYC5 116 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 IGHV4-28A0A0C4DH34 117 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 IGHV3-66A0A0C4DH42 116 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 SSX5O60225 188 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 GNG7O60262 68 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 APOA1P02647 267 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 IL18Q14116 193 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 Q6ZTC4 211 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 BORCS5Q969J3 196 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 PINX1Q96BK5 328 aaKnown RBP7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 TMEM56Q96MV1 263 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 PLEKHA2Q9HB19 425 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 EXTL2Q9UBQ6 330 aa7.65□□□□□ -1.18
CDC42BPB-207ENST00000560492 AGRNO00468 2067 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 FABP12A6NFH5 140 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 MARCH11A6NNE9 402 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 K7EIM0 57 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 KRASP01116 189 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 IGHV3-48P01763 117 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 RLN1P04808 185 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 ELK1P19419 428 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 ETV6P41212 452 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 MFAP4P55083 255 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 POU2AF1Q16633 256 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 PYDC2Q56P42 97 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 PVRIGQ6DKI7 326 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 ZNF818PQ6ZRF7 136 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 CCDC190Q86UF4 302 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 OR5H6Q8NGV6 325 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 S100A16Q96FQ6 103 aaKnown RBP7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 ATP6V0BQ99437 205 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 MIXL1Q9H2W2 232 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 COMMD9Q9P000 198 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 VPS13DQ5THJ4 4388 aa7.64□□□□□ -1.19
CDC42BPB-207ENST00000560492 TRAV18A0A075B6X5 111 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 MEIS3P1A6NDR6 274 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 C15orf61A6NNL5 157 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 F8W735 103 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 CTSGP08311 255 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 P0DMU3 169 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 FAM231AP0DMU4 169 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 FAM231CP0DMU5 169 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 G6PCP35575 357 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 LPAR6P43657 344 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 PPP5CP53041 499 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 MSMO1Q15800 293 aa7.63□□□□□ -1.19
CDC42BPB-207ENST00000560492 TMEM69Q5SWH9 247 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms